Sorex fumeus (smoky shrew): 130033647
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Entry
130033647 CDS
T10594
Symbol
SPAST
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfum04131
]
130033647 (SPAST)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sfum04812
]
130033647 (SPAST)
Enzymes [BR:
sfum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
130033647 (SPAST)
Membrane trafficking [BR:
sfum04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
130033647 (SPAST)
Cytoskeleton proteins [BR:
sfum04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
130033647 (SPAST)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_22
AAA_5
TIP49
AAA_16
AAA_14
MIT
Mg_chelatase
IstB_IS21
DUF815
AAA_24
AAA_33
nSTAND3
NPHP3_N
AAA_2
DUF4368
Motif
Other DBs
NCBI-GeneID:
130033647
NCBI-ProteinID:
XP_055981419
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MPPPSGRGRKPGPAPRPERGPLRRGVALLRLLALRLGLLCVWLCRRLGRALMAARRAARA
APGPAPGPAPGTGPGPGPGPAPAPAAGEAEAVRARHKQAFEYISVALRIDEDDQAGQKEQ
AVEWYKKGIEELEKGIAVIVTGQGEQCERARRLQAKMMTNLVMAKDRLQLLEKLQPVLQF
SKSQTDVYNDSTNLTCRNGHLQSESGAVPKKKDPLTHTSNSLPRSKTVAKTGSTGLSGHH
RAPSYSGLSMVSGARQGPGPAAASQKNAQKTNRTNKPSTPTTAARKKKDLKNFRNVDSNL
ANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPP
GNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVD
SLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKRV
YVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARLTDGYSGSDLTALAKDAALGPIREL
KPEQVKNMSASEMRNIRLADFTESLKKIKRSVSPQTLEAYVRWNKDFGDTTV
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctccgtcgggccgcgggaggaagcccggcccggccccgcggcctgagcgcggc
ccgctgcggcggggcgtcgcgctgctgcgcctgctcgcgctgcgcctggggctgctgtgc
gtgtggctgtgccggcgcctgggccgcgcgctcatggccgcccgccgggccgcccgcgcc
gcgccgggacccgcacccggacccgcgcccggaactggacccggacccggacccggaccc
gcacccgcacccgcggccggggaggccgaggcggtgcgcgcgcgccacaagcaggccttc
gagtacatctcggtggcgctgcgcatcgacgaggacgaccaagcaggacaaaaggagcaa
gccgtggaatggtataagaaaggtattgaagaactcgaaaaaggaatcgccgtcatagtc
acaggccaaggtgaacagtgtgaaagagctcgacgccttcaagctaaaatgatgactaat
ttggttatggccaaggaccggttacagcttctagagaagctacagccagtgttgcagttc
tccaagtcacaaacagatgtctataatgacagtactaacctgacctgccgcaacggacac
cttcagtcagaaagtggagctgttccaaaaaagaaagatcctttaactcacacgagtaac
tcactgcctcgctcaaaaacagtggcgaaaactggatctacaggcctttctggccaccac
cgagcgcccagttacagcggcctgtccatggtctccggagccaggcagggccctgggcct
gcagctgcttctcagaagaatgctcaaaaaacaaacagaacaaataagccttctacccct
acaactgctgctcgtaaaaagaaagacttgaagaatttccgaaatgtggacagcaatctt
gctaaccttattatgaatgaaattgtggacaatgggacagctgttaaatttgatgatata
gctggccaggagttggcaaaacaagcattgcaagaaattgtaattcttccttctctaagg
cctgagttgttcacaggcctgcgcgctcccgcccgaggattgctgctctttggtcctcct
ggaaatgggaagacaatgctggctaaagcagtagctgcagagtctaatgcaaccttcttt
aacataagtgctgcaagtttgacttcaaaatatgtgggagaaggagagaagctggtgcga
gctctctttgctgtggctcgggaacttcagccttccatcatcttcatagatgaagtcgat
agccttttgtgtgaaagacgggaaggagagcacgatgccagtcggcggctgaaaacggag
tttctaatagaattcgatggtgtccagtcggctggcgatgaccgcgtacttgtgatgggg
gcgaccaaccggccgcaggagctggacgaggccgtcctcaggcgtttcatcaaacgagtg
tatgtttctttgccaaacgaggagacgagactacttttacttaaaaatctgctgtgtaaa
caaggaagcccgttgacccaaaaagaactagctcaacttgctagattgactgatggatac
tcaggaagtgatctcacagctttggcgaaagacgcagcactgggacctattcgggaactg
aaaccagaacaagtgaagaacatgtctgccagcgagatgagaaatattcgattagcagac
ttcactgaatccttgaaaaagataaaacgcagtgtgagccctcagaccttagaagcatat
gtacgctggaacaaggactttggagataccaccgtttaa
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