Sorex fumeus (smoky shrew): 130033978
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Entry
130033978 CDS
T10594
Name
(RefSeq) zinc finger protein RFP-like
KO
K12009
tripartite motif-containing protein 27 [EC:
2.3.2.27
]
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfum04121
]
130033978
Enzymes [BR:
sfum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130033978
Ubiquitin system [BR:
sfum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130033978
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
PRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
RING_XB3-XBAT31
Baculo_IE-1
zf-Tbcl_FmdE
ATG17_like
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
130033978
NCBI-ProteinID:
XP_055981548
LinkDB
All DBs
Position
Unknown
AA seq
349 aa
AA seq
DB search
MASGSVAECLQQETTCPVCLQYFAEPRMLDCGHNICCACLARCWGAAETNVSCPQCRETF
PQRHMRPNRHLANVTQLVKQLRTERPSGSGGEMGVCEKHREPLKLYCEEDQMPICVVCDR
SREHRGHSVLPLEEAVEGFKEQIQNQLDHLKRVKDLKKRRRAQGKQARAELLSLTQMERE
KIVWEFKQLYHALKEHEYRLLARLEELDLAIYNSINGAITQFSCKISHLSGLIAQLEEKQ
QQLTRELLQYIGDTLNRAERIRIPEPWITPPDLQEKIHIFAQKCLFLTESLKQFTEKMQS
DMEKIQELREVQLYSVDVTLDPDTAYPSLILSKNLRQVRYSYLLKKCTK
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgggagcgtggccgagtgcctgcagcaggagaccacctgccccgtgtgcctg
cagtacttcgccgagcccaggatgctcgactgcggccacaacatctgttgcgcgtgcctg
gcccgctgctggggcgcggccgagaccaacgtgtcgtgcccgcagtgccgggagaccttc
ccgcagcgccacatgcggcccaatcggcacctggccaacgtgacccagctggtgaagcag
ctgcgcaccgagcggccgtcggggtccggcggcgagatgggcgtgtgcgagaagcaccgc
gagccgctcaagctgtactgcgaggaggaccagatgcccatctgcgtggtgtgcgaccgc
tcgcgcgagcaccgcggccacagcgtgctgccgctcgaggaggccgtggagggcttcaag
gagcaaattcagaatcagctggaccatctcaaaagagtgaaagacttaaagaagaggcgg
cgggctcagggcaagcaggcacgcgcagaactcttgagcctgacccagatggagcgggag
aagatcgtgtgggagttcaagcagctctaccacgcgctcaaggagcacgagtaccgcctc
ctggcgcgcctggaggaactggacctggccatctacaacagcatcaacggcgccatcacg
cagttctcctgcaagatctcccacctcagcggcctcatcgcccagctggaggagaagcag
cagcagctgacgcgggaactcctgcagtacatcggggacacactcaacagggctgaaagg
atcaggatcccggaaccttggatcacacctccagatctgcaggagaaaatccacattttt
gcccagaaatgcctgttcttgaccgagagtctgaagcaattcacagaaaaaatgcagtcg
gatatggagaaaatccaagaattgagagaggttcagttatactcagtggacgtgacgctg
gatcccgacacggcctaccccagcctcatcctgtccaagaacctgcggcaggtgcgctac
agttacctccttaaaaaatgtactaaataa
DBGET
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