KEGG   Sorex fumeus (smoky shrew): 130033978
Entry
130033978         CDS       T10594                                 
Name
(RefSeq) zinc finger protein RFP-like
  KO
K12009  tripartite motif-containing protein 27 [EC:2.3.2.27]
Organism
sfum  Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:sfum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sfum04121]
    130033978
Enzymes [BR:sfum01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     130033978
Ubiquitin system [BR:sfum04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    130033978
SSDB
Motif
Pfam: zf-B_box PRY zf-RING_UBOX zf-C3HC4_4 zf-C3HC4 zf-C3HC4_3 zf-C3HC4_2 zf-RING_2 RING_XB3-XBAT31 Baculo_IE-1 zf-Tbcl_FmdE ATG17_like zf-RING_4
Other DBs
NCBI-GeneID: 130033978
NCBI-ProteinID: XP_055981548
LinkDB
Position
Unknown
AA seq 349 aa
MASGSVAECLQQETTCPVCLQYFAEPRMLDCGHNICCACLARCWGAAETNVSCPQCRETF
PQRHMRPNRHLANVTQLVKQLRTERPSGSGGEMGVCEKHREPLKLYCEEDQMPICVVCDR
SREHRGHSVLPLEEAVEGFKEQIQNQLDHLKRVKDLKKRRRAQGKQARAELLSLTQMERE
KIVWEFKQLYHALKEHEYRLLARLEELDLAIYNSINGAITQFSCKISHLSGLIAQLEEKQ
QQLTRELLQYIGDTLNRAERIRIPEPWITPPDLQEKIHIFAQKCLFLTESLKQFTEKMQS
DMEKIQELREVQLYSVDVTLDPDTAYPSLILSKNLRQVRYSYLLKKCTK
NT seq 1050 nt   +upstreamnt  +downstreamnt
atggcctccgggagcgtggccgagtgcctgcagcaggagaccacctgccccgtgtgcctg
cagtacttcgccgagcccaggatgctcgactgcggccacaacatctgttgcgcgtgcctg
gcccgctgctggggcgcggccgagaccaacgtgtcgtgcccgcagtgccgggagaccttc
ccgcagcgccacatgcggcccaatcggcacctggccaacgtgacccagctggtgaagcag
ctgcgcaccgagcggccgtcggggtccggcggcgagatgggcgtgtgcgagaagcaccgc
gagccgctcaagctgtactgcgaggaggaccagatgcccatctgcgtggtgtgcgaccgc
tcgcgcgagcaccgcggccacagcgtgctgccgctcgaggaggccgtggagggcttcaag
gagcaaattcagaatcagctggaccatctcaaaagagtgaaagacttaaagaagaggcgg
cgggctcagggcaagcaggcacgcgcagaactcttgagcctgacccagatggagcgggag
aagatcgtgtgggagttcaagcagctctaccacgcgctcaaggagcacgagtaccgcctc
ctggcgcgcctggaggaactggacctggccatctacaacagcatcaacggcgccatcacg
cagttctcctgcaagatctcccacctcagcggcctcatcgcccagctggaggagaagcag
cagcagctgacgcgggaactcctgcagtacatcggggacacactcaacagggctgaaagg
atcaggatcccggaaccttggatcacacctccagatctgcaggagaaaatccacattttt
gcccagaaatgcctgttcttgaccgagagtctgaagcaattcacagaaaaaatgcagtcg
gatatggagaaaatccaagaattgagagaggttcagttatactcagtggacgtgacgctg
gatcccgacacggcctaccccagcctcatcctgtccaagaacctgcggcaggtgcgctac
agttacctccttaaaaaatgtactaaataa

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