Sorex fumeus (smoky shrew): 130034022
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Entry
130034022 CDS
T10594
Symbol
PPARGC1A
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X1
KO
K07202
alpha peroxisome proliferator-activated receptor gamma coactivator 1-alpha
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04152
AMPK signaling pathway
sfum04211
Longevity regulating pathway
sfum04371
Apelin signaling pathway
sfum04714
Thermogenesis
sfum04910
Insulin signaling pathway
sfum04920
Adipocytokine signaling pathway
sfum04922
Glucagon signaling pathway
sfum04931
Insulin resistance
sfum04936
Alcoholic liver disease
sfum05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
130034022 (PPARGC1A)
04152 AMPK signaling pathway
130034022 (PPARGC1A)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
130034022 (PPARGC1A)
04922 Glucagon signaling pathway
130034022 (PPARGC1A)
04920 Adipocytokine signaling pathway
130034022 (PPARGC1A)
09149 Aging
04211 Longevity regulating pathway
130034022 (PPARGC1A)
09159 Environmental adaptation
04714 Thermogenesis
130034022 (PPARGC1A)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
130034022 (PPARGC1A)
09167 Endocrine and metabolic disease
04936 Alcoholic liver disease
130034022 (PPARGC1A)
04931 Insulin resistance
130034022 (PPARGC1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sfum03029
]
130034022 (PPARGC1A)
Mitochondrial biogenesis [BR:
sfum03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
130034022 (PPARGC1A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
130034022
NCBI-ProteinID:
XP_055981598
LinkDB
All DBs
Position
Unknown
AA seq
803 aa
AA seq
DB search
MDEPSSRLEEDWKKGLQREVSWQCAALVGEDQPLCPDLPELDLSELDVNDLDTDSFLGGL
KWCSDQSEIISNQYNNEPSNIFEKIDEENEANLLAVLTETLDSLPVDEDGLPSFDALTDG
DVTTENEASPSSMPDGTPPPQEAEEPSLLKKLLLAPANTQLSYNECSGLSTQNHANHNHR
IRTNPAVVKTENSWSNKAKSICQPQKPQRRPCSELLKYLTTNDDPPHTKPTENRNSSRDK
STFKKKSHTQSQSQHLQAKPTTLSLPLTPESPNDPKGSPFENKTIERTLSVELSGTAGLT
PPTTPPHKANQDNPFRASPKLKSSCKTVVPPPSKKPRYSESSGTQGNNSTKKGPQQSELY
AQLSKTSVLTSGQEERKTKRPSLRLFGDHDYCQSINSKTEVLINISQELQDSGQLNYKDA
SSNGQGQICSSTDSDPCYLRETVVAGKHTSPCSARKQLQDQEIRAELNKHFGHPSQAVFD
DEADKTSELRDSDFSNEQFSKLPMFINSGLAMDGLFDDSEDESDKLSYPWDGTQSYSLFD
VSPSCSSFNSPCRDSVSPPKSLFSQRPQRMRSRSRSFSRHRSCSRSPYSRSRSRSPGSRS
SSRSCYYYESSHCRHRAHRNSPLCARSRSRSPYSRRPRYDSYEEYQHERLKREEYRKEYE
KRESERAKQRERQRQKAIEERRVIYVGKIRSDTTRTELRDRFEVFGEIEECTVNLRDDGD
SYGFITYRYTCDAFAALENGYTLRRSNETDFELYFCGRKQFFKSNYADLDSNTDDFDPAS
TKSKYDSLDFDSLLKEAQRSLRR
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggatgagccctcctcaaggctggaagaagactggaaaaaaggacttcagcgagaagtg
agctggcagtgtgctgctctggttggtgaagaccagcctctttgcccagatcttcctgaa
cttgacctctctgaactagacgtgaacgacttggatacagacagctttctgggtggactc
aagtggtgcagtgaccaatcagaaataatatccaatcagtacaacaatgagccttcaaac
atatttgagaagatagatgaagagaatgaggcaaacttgctagcagttctcacagagaca
ctggacagtctccctgtggatgaagacggattgccctcatttgatgcactgacagatgga
gatgtgaccacggagaatgaggctagtccttcctccatgcctgacggcactcctccccct
caggaggcagaagagccgtctctacttaagaagctgttactggcaccggccaacactcag
ctaagttataatgaatgcagtggtctcagcactcagaaccatgcaaaccacaatcacagg
atcagaacaaaccctgcagttgttaagaccgagaattcatggagcaataaagcgaagagc
atttgtcaaccgcaaaagccacaaagacgtccctgctcagagcttctcaagtatctgacc
acaaacgatgaccctcctcacaccaaacccacagagaacaggaacagcagcagagacaaa
agcaccttcaaaaagaagtcccacacacaatcccagtcgcaacatttacaagccaaacca
acaactttatctcttcctctgaccccagagtcaccaaatgaccccaagggttccccattt
gagaacaagactattgaacgaaccttaagtgtggaactctctggaactgcaggcctaact
ccacccaccactcctccacataaagccaaccaagataaccctttcagggcttcacccaag
ctgaagtcctcttgtaagactgtggtacctccaccatccaagaagccccgctacagtgag
tcttcgggtacccaaggcaataactccaccaaaaaagggccccaacagtctgagctgtac
gcacagctcagcaagacctcagtgctcaccagtggacaagaggagaggaagaccaagcgg
ccgagtctgcggctgttcggtgaccatgattattgtcagtcaattaattccaaaacggaa
gtactcattaatatttcacaggagctccaagactccggacaactaaactataaagatgcc
tcctccaatggtcaggggcagatttgttcttccacagattcagacccgtgctacctgaga
gagactgtggtggccggcaagcacacctctccttgcagcgcccggaaacagctccaagac
caggaaatccgagccgagctgaacaagcacttcggtcatcccagtcaagctgtttttgac
gacgaagcagacaagaccagtgaactgagggacagtgatttcagtaatgaacaattctcc
aaactacctatgtttataaattcaggactagccatggatggcctgtttgatgacagcgaa
gatgaaagtgataaactgagctacccttgggatggcacgcagtcctattcattgtttgat
gtgtcaccttcttgctcttcttttaactctccgtgtagagactctgtgtcaccacccaaa
tccttattttctcaaagaccccaaaggatgcgctctcgttcaaggtccttttctcgacac
aggtcgtgttcccgatcaccatattccaggtcaagatcacggtccccaggaagtagatca
tcttcaagatcttgctactactatgagtccagtcactgcagacaccgtgcacaccgaaat
tctcctctgtgcgcaagatcacggtcgagatccccctacagccgtaggcccaggtatgac
agctatgaggaatatcagcacgagaggctgaagagggaagaataccgcaaggagtatgag
aagcgggagtccgagcgggccaagcaaagagagaggcagagacagaaggcaattgaagaa
cgccgtgtgatttatgttggtaaaatcaggtctgacactacacggacagaactgagggac
cgttttgaagtttttggtgaaattgaggagtgcacagtaaatctacgggatgatggagac
agctatggtttcattacctaccgttatacctgtgatgcttttgctgctcttgaaaacgga
tatactttgcgcaggtcaaatgaaactgacttcgagctgtacttttgtggacgcaagcaa
tttttcaagtctaactatgcagacctagattcaaacacagatgactttgaccctgcttcc
accaagagcaagtatgactctctggattttgacagtttactgaaagaagctcagagaagc
ttgcgtaggtaa
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