Sorex fumeus (smoky shrew): 130034130 Help Entry 130034130         CDS       T10594                                  Name (RefSeq) collagen alpha-6(IV) chain-like   KO K06237   collagen type IV alpha Organism sfum  Sorex fumeus (smoky shrew) Pathway sfum04151   PI3K-Akt signaling pathway sfum04382   Cornified envelope formation sfum04510   Focal adhesion sfum04512   ECM-receptor interaction sfum04820   Cytoskeleton in muscle cells sfum04926   Relaxin signaling pathway sfum04933   AGE-RAGE signaling pathway in diabetic complications sfum04974   Protein digestion and absorption sfum05146   Amoebiasis sfum05165   Human papillomavirus infection sfum05200   Pathways in cancer sfum05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:sfum00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     130034130   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     130034130  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     130034130   09142 Cell motility    04820 Cytoskeleton in muscle cells     130034130  09150 Organismal Systems   09152 Endocrine system    04926 Relaxin signaling pathway     130034130   09154 Digestive system    04974 Protein digestion and absorption     130034130   09158 Development and regeneration    04382 Cornified envelope formation     130034130  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     130034130   09162 Cancer: specific types    05222 Small cell lung cancer     130034130   09172 Infectious disease: viral    05165 Human papillomavirus infection     130034130   09174 Infectious disease: parasitic    05146 Amoebiasis     130034130   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     130034130  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:sfum04147]     130034130    00536 Glycosaminoglycan binding proteins [BR:sfum00536]     130034130 Exosome [BR:sfum04147]  Exosomal proteins   Exosomal proteins of other cancer cells    130034130 Glycosaminoglycan binding proteins [BR:sfum00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    130034130 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  130034130 NCBI-ProteinID:  XP_055981661 LinkDB All DBs Position Unknown AA seq 1649 aa AA seqDB search MTKVKIVPIEEGQPGPTGTQGPTGPQGFTGPTGLLGLKGEKGSPGPLGPYGPKGDKGPIG IPGFLGIDGIPGHPGQPGPRGPPGLDGSNGTKGEVGFPGTHGYPGLTGSVGLFGHKGAKG EPALAKGNFKGMKGDPGLPGLKGHYGPQGAPGSPGFKGPKGPPGLHGPPGSPGLPGPDGN MGLGFQGEKGVKGDIGLPGPAGPPPSSGELEFMGFPKGNKGSKGEPGPQGFPGAKGLPGF PGFGTSGEKGEKGISGLPGPRGPMGFKGAQGPPGSQGMKGVSGFRGLNGFPGIKGEKGGI GLPGPDVFIDTDGAVISGYPGDTGLPGLPGLKGNQGIKGQRGPSGVPGFPALPGVPGTKG VYGVPGLKGNQGNPGHTTIGIAGLPGRDGLPGHRGPPGPPGPVFYTTTLQDIGHAGHKGK QGLKGNSGLKGVKGEPGFCVCDGDILNTGPPGEPGLSGLPGIKGLPGPKGAKGDLGSEGP RGPSGAPGLLGPQGPKGLKGSKGEPTIWDARSGMPGEKGEPGLKGLRGEKGVSGKDGMPG LPGMQGLPGDDGLGFPGEKGFAGFPGEKGRSGPVGPSGIGLPGSPGPKGLPGDKGEDGLP GQKGLPGLPGITLPCVIPGSYGPSGFPGASGFPGPKGARGLSGIPGQPGPRGIKGDLGIP GSVPIPELPGFPGPRGEKGLPGLPGIPGKDGFPGRIGSPGLTGFKGTPGQVLNAEKGVRG EKGLKGFPGEKGFPGEAGYPGPKGFPGNSGMIGPKGEKGNPGIPGFKGQPGFPGHDGASG IKGSPGFPGVPGTPGISGHPGMKGSKGEKGTPGTSVKIGLPGMKGLPGIPGLTGYPGNPG LPGHTGFSGLPGLKGEKGSKGLMGFPGMPGPHGVPGASGLKGIPGLVGAMGPSGLTGSPG LKGDQGEKGPAGTPSQRPPVLNYQIKGDKGTQGPDGPKGFPGPRGDKGEIGLPGLPGLPG VPGYLNTIKGVSGVAGSLGFTGLRGLPGLKGSPGIPGFLGIPGESGSQGLSGVPGSPGAS GLPGLKGEKGETLEISGIPGLKGQPGEVGLKGIKGQDGLVGKKGFPGNKGEDGRVGIHGD IGLPGSPGIPGIAGMTGHPGRLGSPGHPGSTGQLGLPGLKGTKGLPGLPGLHGLNGLPGN KGDHGTQGTSLTGVPGPAGPPGLKGEKGSPGTGVDIPGNPGIKGQKGSQGFPGLQGPAGP PGAPGLSFPSLIAGQPGDPGQPGLDGERGRPGLPGPPGPPGPTSDQGNPGDPGFPGIPGP QGPQGDQGIPGFSGLPGELGLKGMRGEPGFMGIPGKVGPPGDPGFPGMKGKAGPRGLSGP QGAPGQTPTAEELQAPPGVSGLPGMDGIPGLSGDPGVQGPGGLQGSKGLPGISGKDGPNG LPGPPGVLGNPGVPGLQGPPGFEGPPGKQGPLGRPGMPAQSVRVGYTLVKHSQSKQVPQC PLGMKQLWVGYSLLFVEGQEKAHNQDLGFAGSCLPHFTTIPFIYCNINEVCHYARHNDKS YWLSTTAPIPMMPISQAQISQYISRCSVCEAPSQAIAVHSQDIAIPQCPLGWRSLWIGYS FLMHTAAGAEGGGQSLVSPGSCLEDFRATPFIECSGSRGTCHYFANKYSFWLTTVEERQQ FEEEPVSETLKVGQLHTRVSRCQVCVKSL NT seq 4950 nt NT seq  +upstreamnt  +downstreamnt atgaccaaagttaaaattgtgcccattgaggaggggcagccaggcccaactggaactcaa ggcccaacaggtcctcaaggattcactggccctactggtttattggggctgaaaggagaa aagggttccccaggccctctgggaccatatggaccaaaaggagataagggtcccattgga attcctggctttcttggcattgacgggatcccaggtcaccctggacagccaggacccaga ggcccacctggcctggatggctctaatggaactaaaggagaagttggattcccaggtact catggttatcctggacttactggatctgtggggctttttggtcataaaggagctaaaggc gaacctgcccttgccaagggtaatttcaaaggaatgaagggtgatcctgggctgcctgga ctaaaaggacactacggcccacaaggagcacctggatctccaggatttaaaggacccaag ggaccaccaggattgcatggcccaccaggctccccaggccttcctggtcctgatggtaat atgggtttaggtttccaaggagaaaaaggagttaagggagacattggcctccctggccct gcaggaccaccaccatctagtggagaactggaatttatgggatttcccaaaggaaataaa ggatctaagggagaaccagggcctcagggcttcccaggagccaagggccttccaggcttc ccggggtttggaacttctggagaaaagggagaaaagggaatttctggtttgccaggacct aggggtcccatgggttttaaaggagcccaaggtcctcctgggagtcagggcatgaagggg gtctccggtttccgtgggctgaatggattcccaggaattaagggtgaaaagggtggcata ggtctgccaggcccagatgttttcatcgatacagatggtgctgtgatctcaggttaccct ggagacacaggtttgccaggccttccaggtcttaaaggaaaccaaggaatcaaaggccaa cgtggaccttctggagtacctggcttcccagctttaccaggtgtccctggtaccaagggg gtctatggagttccaggcctgaaggggaatcaaggaaaccctggccataccacaattggc atagctggtctccctggtagagatggtttgccaggccatcgtggtcccccaggcccacct ggtccagtattctataccactaccctacaggacatagggcatgctggtcacaaaggaaag caaggtctaaaaggaaactccggcctcaaaggagtgaaaggggaacccggtttttgtgtt tgtgatggtgatattctcaacactggcccacctggggagccaggcctgtctgggctacca ggtatcaaaggccttccaggtccgaaaggagccaaaggagatctaggctccgaaggccca cggggtccatcaggagctccgggtttgcttggacctcaaggtcctaaaggactcaaagga agtaagggggagccaactatctgggatgcacgatctgggatgccaggagagaagggtgag cctggtctcaagggacttcgtggtgagaaaggagtctcaggcaaggatggaatgccaggt ttaccaggcatgcaaggacttccaggtgatgatggactgggcttcccaggtgaaaaggga tttgcagggtttcctggtgaaaagggccgtagcggaccagttggtccctcaggaattggg ctacctggatctcctggccctaaagggcttcctggagataaaggagaagatggattaccc ggacaaaaaggcctccctgggcttccaggtatcaccttgccatgtgtaattcctgggtca tatggtccatcaggatttccaggagcttctggatttccaggccctaaaggagcccgtggt ctctctgggattccaggccagcctggaccacgtggaattaaaggagacctggggattcca ggctcagttcctatccctgaattgccaggatttcctgggcctcgtggtgagaaaggcttg cctggattacctgggattcctggaaaagatggcttccctgggagaattggaagtccaggt ttaactggttttaagggaacccctggccaggtccttaatgctgagaaaggtgttagagga gagaaaggcctgaagggatttccaggagagaaaggatttcctggagaagctggctatcca ggacccaaaggttttcctgggaattctggcatgattggtcccaaaggagagaagggtaac cctggaataccaggcttcaagggacagccaggcttccctgggcatgatggcgcatctgga atcaagggcagccctggattcccgggggtaccaggaacaccaggtatttctggacatcct ggaatgaaaggttcaaaaggcgaaaaaggtacccctggaacaagtgtcaagataggccta cctgggatgaaaggccttcctggaattccagggctaactggctacccaggaaacccaggc cttccaggacacactggcttctcaggcctgcctggcttaaagggtgaaaagggatccaag ggactgatgggctttccaggaatgccaggtccccatggtgttcctggtgcaagtggactg aagggaattcctggattagtcggagcaatgggaccatctggactcactgggagccctggt ttaaaaggagaccaaggtgagaaggggccagccggaacaccgagtcaaagaccaccagtg ctgaactaccagatcaaaggagacaaaggcactcagggcccagatggacccaaaggtttt cctggacccagaggtgacaaaggagagattggcctccctggactacccggcttgcctgga gttcctggatatcttaacactatcaagggagtttctggggtggcaggatcccttggtttc acaggcctgcgaggcttacctggcttgaaagggtcccctggaatcccaggattcctagga ataccaggagaaagtggttcacagggtcttagtggagttcctggatccccaggtgcatct ggtctcccaggcctaaaaggagagaaaggtgagacacttgaaatttctggcatcccagga ctcaagggacaacctggagaggttggtcttaaaggtataaaaggacaagatggactagtt ggcaaaaaaggtttcccaggaaacaaaggtgaagatggaagagttggcattcatggagat attggccttcctggctccccaggaattcctggtattgctggcatgactggacatccagga cgtctgggttctcctggccacccagggtcaactgggcagttgggactccctggcttaaaa ggaaccaaaggccttcctggacttcctggattacatggactgaatggtcttccaggaaac aaaggagatcatggaacacaaggaactagtttaactggtgtacctggaccagctggccct cctggtctcaaaggtgaaaaaggctctccaggaactggagttgatatcccaggaaatcca gggattaaaggacagaaaggtagccaaggtttcccaggtctccagggtcctgctggtccc cctggtgccccaggcctctcctttccctcattaatagcaggacagcctggcgaccctggg caaccaggcctagatggagaacgaggccgtccaggcctcccagggcctccaggtccccct gggccaacctcggatcaaggcaaccctggagaccctggcttccctggaattcctggccct caagggccccagggagaccaaggaattccaggtttctctggccttcctggagagctagga ctaaaaggcatgagaggtgagcctggattcatgggaattccaggcaaggttggtccacct ggagacccaggatttcccgggatgaagggaaaggcagggccaagaggcctttctgggccc caaggtgctcctggacaaacacccactgcagaagaactccaggctcctcctggagtctca ggtctaccaggcatggatggcatccctggcctttcaggagacccgggggttcaaggccct ggaggcttacaaggctccaaaggtttacctggcatctctggcaaagatggtcccaatgga ctccccggcccacctggagttcttggcaatcctggtgttcctggactacaaggccctcca ggatttgaaggacctccagggaagcagggcccccttgggaggcctggaatgccggcgcag agtgtgagagtgggctacactctggtgaaacatagtcaatccaaacaggtgccccagtgc cctctcggtatgaagcagttgtgggtgggttacagcttgctgttcgtggagggacaggag aaagcccacaaccaggatttaggttttgctggctcctgtttgccccatttcaccaccata cccttcatctactgcaacatcaatgaagtgtgccactatgctaggcacaatgataaatct tactggctctctacgactgcccctatccctatgatgcccatcagccaggcccagatttcc cagtacattagccgctgctctgtgtgtgaggcaccctcgcaagccattgctgtgcacagc caagacatcgccattccacaatgcccactgggctggcgcagcctctggattgggtactcc ttcctcatgcacactgccgctggtgctgagggcggaggccagtccctggtctcacctggc tcctgcctggaggatttccgagctactcctttcatcgagtgcagtggttcccggggcacc tgccactactttgccaacaagtacagtttctggctgacgacagtggaagagaggcagcag tttgaagaagagcctgtttcagaaacgctcaaagtcgggcagctccatacccgggtcagc cgctgccaggtgtgtgtgaagagcctgtag

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