Sorex fumeus (smoky shrew): 130034168
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Entry
130034168 CDS
T10594
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04151
PI3K-Akt signaling pathway
sfum04510
Focal adhesion
sfum04512
ECM-receptor interaction
sfum04820
Cytoskeleton in muscle cells
sfum04926
Relaxin signaling pathway
sfum04933
AGE-RAGE signaling pathway in diabetic complications
sfum04974
Protein digestion and absorption
sfum05146
Amoebiasis
sfum05165
Human papillomavirus infection
sfum05200
Pathways in cancer
sfum05222
Small cell lung cancer
Brite
Exosome [BR:
sfum04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
130034168 (COL4A5)
Glycosaminoglycan binding proteins [BR:
sfum00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
130034168 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130034168
NCBI-ProteinID:
XP_055981685
LinkDB
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Position
Unknown
AA seq
1691 aa
AA seq
DB search
MKRRGVRLAAGFFLLALSLWGQPVEAAACYGCSAGSKCDCSGVKGEKGEKGFPGLEGHPG
LPGFPGPEGPPGPLGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQG
IPGCNGTKGERGFPGRPGFPGLQGPPGPPGIPGMKGEPGSVIMSSLPGPKGNTGYPGPPG
IQGPAGPTGIPGPMGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGP
PGQIGEQKRTIDLEFQKGDQGLPGEQGPPGPPGIRGPPGPPGGVKGEKGEQGEPGKRGKP
GKDGESGQPGIPGLPGDPGYPGEPGRNGEKGQKGDIGPTGPPGLVIPRPATGVNVGEKGS
IGLPGLPGEKGEKGFPGIQGPPGLPGPPGAAAMGPPGPPGLPGEKGQKGDEGLPGISIPG
SPGLDGQPGPPGLPGPPGPPGPPGPPSDEICQSGPPGPQGPPGDKGLRGEQGVKGDRGDT
CFNCIGTGISGPPGQPGLPGLPGPPGSLGFPGPKGEKGQAGTTGPKGLTGIPGAPGAPGF
PGSKGEPGDIYTYPGMKGDKGELGPPGSPGLPGLPGTPGQDGLPGLPGRKGEPGQIAFKG
ERGPPGNPGLPGLPGNMGPMGPLGIGPPGPVGEKGIKGMAGGPGQPGIPGQKGDPGQTIT
QPGKPGLPGNPGKDGEAGLPGEPGLPGQPGLPGLPGSKGEPGMPGIGLPGPPGPKGYPGI
PGPPGVPGIPGRSGVEGPPGLPGFPGPKGEPGVALPGQPGPPGLPGIKGTLGPKGDRGFP
GPPGPPGQTGLDGMPGSKGDIGANGQPGPMGPPGLPGIGVQGPPGPPGIPGPAGQPGLKG
IPGEKGDSGPPGFDVPGPPGEKGSPGIPGAPGPVGPPGSPGLPGKAGATGFPGAKGEMGV
MGPPGPPGPLGIPGRSGVPGLKGDNGFPGQPGLPGPAGEKGSKGEPGLPGPPGPMDPDLI
VSKGEKGDPGLPGFPGVSGPKGHPGLPGDPGQPGLSGEPGLPGPSGPKGEPGVPGHPGRM
GPPGLKGNMGEMGFPGPQGLKGSSGPPGVPGQPGSPGLTGQKGEKGDTGASGSRLPGLPG
PKGEPGLPGYPGNPGMKGSAGVTGLPGAKGEPGAKGQPGLPGFPGTPGLPGPKGINGPPG
NPGLPGEPGPVGGRGHPGQPGPIGEKGQPGQDGIPGPAGQKGEPGQPGFGIPGPPGLPGL
SGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGSPGPQGHP
GRPGPTGYQGQPGPEGPRGLPGNGGIKGEKGNPGQPGQPGLPGLKGDQGPPGLQGDPGRP
GLNGMKGDPGLPGVPGFPGLKGPTGVPGSTGPEGNPGPMGPPGPPGLPGPSGQSIIIKGD
SGPPGVPGQPGLKGPPGPPGPQGLPGPIGLPGDPGHNGLPGFDGAGGRKGDPGLPGQPGT
RGLDGPPGPDGLQGPPGPPGSSSFTHGFLITRHSQTTDAPPCPPGTVKIYDGFSLLYVQG
NKRAHGQDLGTAGSCLRRFSTMPFMFCNVNNICNFASRNDYSYWLSTPEPIPLSMEPLKG
QNIKPFISRCAVCEAPAMVIAVHSQTIQIPHCPQEWDSLWIGYSFMMHSSSGAEGSGQAL
ASPGSCLEEFRSSPFIECHGRGTCNYYANSYSFWLATVDISDMFSKPQSETLKAGDLRTR
ISRCQVCMKKT
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggcgcggagtccgcctggccgcgggcttcttcctcctggccctgagcctttgg
gggcagccggtagaggctgcggcttgctatgggtgttctgcaggatcaaagtgtgactgt
agtggtgtaaaaggagaaaagggggagaaaggatttccaggattggaaggccatccaggt
ttgcctggatttccaggtcctgaaggtcctccagggcctctgggacaaaagggtgatgat
ggaattccaggaccaccaggaccaaaaggcattagaggtcctcctggacttcctggattt
ccagggacaccgggccttcctggaatgccaggccatgatggggccccaggacctcaaggt
atccctggttgcaatggaaccaagggagaacgtggatttcctggccgtcccggttttcct
ggtttacagggtcctccaggacctcctggtatcccaggcatgaagggagaaccaggtagt
gtaatcatgtcatcactaccaggaccaaagggtaatacgggatatccaggtcctcccgga
atacaaggtccagctggtcctactggtataccaggaccaatgggtcccccaggaccacca
ggtttaatgggtcctcctggtccaccaggacttcctggaccaaagggcaatatgggctta
aatttccagggacccaaaggtgaaaagggtgaacaaggtcttcaagggccccctggacca
cctgggcagatcggtgaacagaaaaggacaattgatctagagtttcagaaaggagatcag
ggactacccggtgagcaagggccccctggacctccaggaatacgtggtcctccaggtcct
ccagggggtgtgaagggtgagaaaggtgaacaaggagaaccaggcaaaagaggcaaacca
ggaaaagatggagagagtggtcagccaggaattccaggtttgccaggtgatcctggttac
cctggtgaaccaggaaggaatggagaaaagggccaaaaaggtgacattggtccaactggg
cctccaggacttgtaattcccaggcctgcaacaggtgtaaatgtaggagaaaaaggaagc
attgggttacctggcttgcctggagaaaaaggagaaaagggatttcctggtatacagggt
ccacctggtctgcctgggcctccaggagctgcagctatgggtcctcctggccctcctggc
ttgcctggagaaaagggccagaaaggtgatgaaggtctacctggaatttccattcctgga
tctcctggacttgatggacagcctggacctcctggccttcctggtcctcctgggcctcct
gggcctcctggtcctcctagtgatgagatttgtcagtcaggcccacctggtcctcaagga
cctccaggtgataaaggacttcgaggagaacaaggagtgaaaggtgacagaggtgacact
tgcttcaactgtattggaactggtatttctgggcctcctggtcaacctggtttgccaggt
cttccaggtcctccaggatctcttggtttccctggaccaaaaggtgaaaaggggcaagct
ggtacaactggtcccaaaggactaacaggaataccaggggctccaggggctccaggcttt
cctggatctaaaggtgaacctggtgacatctacacttacccaggaatgaagggtgacaaa
ggagagttgggtccccctggatctccaggacttcctggtttacctgggactcctggacag
gatggattgccaggacttcctggccgcaaaggagaacctggtcaaattgcttttaagggt
gaaagaggtccccctgggaacccaggtttgccaggtctcccagggaacatggggcctatg
ggccctcttggcattgggcctccaggcccagtaggtgaaaaaggcataaaaggtatggca
ggaggtccaggtcagccaggaattccaggtcaaaagggtgatccaggtcagaccataact
cagccagggaagcctggcctacctggtaacccaggtaaagatggtgaagcaggtcttcca
ggtgaacctggactcccaggacagccaggcttgccaggactacctggcagcaaaggagaa
ccaggcatgcctggaattggacttcctggacctccaggtcccaaaggttatcctggaatt
ccaggacccccaggagtacctgggatacctggaagaagtggtgtagaaggtcctcctggg
ctaccaggctttccaggtccaaagggagaaccaggagttgctttacctggacaaccagga
cctccaggactcccaggcatcaaaggaacacttggcccaaaaggggaccgaggtttccca
ggtcctccaggtcctccaggacaaactggcttggatggaatgcctggatctaaaggtgac
attggagcaaatggacaacctggaccaatgggacctcctgggctgccaggaataggtgtt
cagggaccaccaggaccaccaggtattcctggaccagcagggcagcctggcttaaaagga
ataccaggagagaagggggattcaggacctcctggatttgatgttccaggtccccctggt
gagaaaggcagtccagggatccctggagcacctggtcctgtgggacctccaggatcacca
gggctcccaggcaaagcaggtgccaccggttttccaggtgccaaaggtgaaatgggtgtt
atgggacctccaggcccaccaggacctttgggaattccaggaaggagtggtgttcctggt
cttaaaggtgataatggctttccggggcaaccaggacttcctggccctgcaggagaaaaa
ggtagtaaaggagagcctggccttccaggtccccctggaccaatggatccagatctgata
gtctcaaaaggagagaagggggaccctggtttacctggatttcctggagtttctgggcca
aaaggtcatcctggcttacctggagacccaggacaacctggattaagtggggagcctgga
ttaccaggaccctcaggtcctaagggtgaacctggtgtcccagggcatccaggacgtatg
ggacctcctggacttaaaggaaacatgggtgagatggggtttccaggacctcagggtctg
aaaggatcatctggacctcctggtgttcctggacaacctggctccccaggactaacagga
cagaaaggagaaaaaggtgatacaggtgcttctggcagtcgtcttccaggtctgcctggc
ccaaagggtgaacctggtctgcctggatatccaggtaaccctggtatgaaaggttctgca
ggagttactggtttgcctggagcaaaaggagaacctggagcaaaggggcaaccaggcctt
cctggattccctggaaccccaggccttcctggaccaaagggtattaatggtcctcctggg
aatcctggccttcctggagaacctggtcctgtaggtggcagaggtcatcctgggcaacca
gggcctataggtgaaaaaggccaaccaggtcaagatggtattcctgggccagctggacag
aaaggtgaaccaggtcaaccaggctttggaatcccaggaccccctggacttccaggactc
tctggtcaaaagggtgatggaggattacctggaataccaggaaatcctggccttccaggc
ccaaagggtgaaccaggctttcatggtttccctggtgtacagggtcccccaggccctcct
ggttctccaggcccagctctggaaggcccaaaaggcagtccaggtccccaaggtcatcct
gggagaccaggtcctacaggttatcaaggtcaaccagggccagaaggtcctcgtggtctc
cctggaaatggaggtattaagggagagaaaggaaacccaggccaacctgggcaacctggt
ttgcctggattgaaaggagatcaaggaccaccaggactccagggtgatcctggtcgtcca
ggtcttaatggaatgaaaggagatccaggtctccctggtgtaccaggattcccaggcctg
aaaggacccactggagtacctggttcaactggccctgaaggaaatcctggacctatgggg
cctcctggtccccctggattacctggtccttccggacaaagtattataatcaaaggagac
tctggtccaccaggagtcccaggccaacctggattaaaaggtccaccaggcccaccagga
cctcaaggattaccaggtccaattggccttccaggagaccctggacacaatgggctccct
ggatttgatggagcgggaggacgcaaaggagacccaggtctgcctggccaaccaggtacc
cgtggtttggatggtcctcctgggccagatggattacaaggccctccaggtccacctgga
tcctcatctttcacccatggattcctcatcacacgtcacagtcagacaacagatgcacct
ccatgcccaccaggaactgtcaagatttatgatggcttttctcttctatatgtacaggga
aataaaagagctcatggccaagatttggggacagctggcagctgccttcgtcgcttcagt
accatgcctttcatgttctgcaatgtcaataatatttgcaattttgcttcaagaaatgac
tattcttactggctctccaccccagagcccatacctttgagcatggagcccttgaaagga
cagaacattaagccatttattagtcgatgtgcagtatgtgaagctccagccatggtcatt
gcagtccatagtcagaccatccaaattccccattgtccacaggaatgggattctctctgg
attggttattccttcatgatgcactcaagttcaggagcagaaggttcaggtcaagctctg
gcctcccctggctcttgcttggaagagtttcgttcatctcccttcattgaatgtcatggg
agaggtacctgcaactactatgccaactcctacagcttttggttagcaactgtggatatt
tcagacatgtttagcaagcctcagtcagaaacgctgaaagcaggagacttgagaacacgc
attagccgatgtcaagtgtgtatgaaaaagacataa
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