Sorex fumeus (smoky shrew): 130034506
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Entry
130034506 CDS
T10594
Symbol
PTCHD4
Name
(RefSeq) patched domain-containing protein 4 isoform X1
KO
K24682
patched domain-containing protein
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sfum04990
]
130034506 (PTCHD4)
Domain-containing proteins not elsewhere classified [BR:
sfum04990
]
Other domain-containing proteins
Patched domain-containing proteins
130034506 (PTCHD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
130034506
NCBI-ProteinID:
XP_055982043
LinkDB
All DBs
Position
Unknown
AA seq
904 aa
AA seq
DB search
MCFLRRPGAPASWIGWRMLRQVLRRGLQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSA
LNRFQPEGDLERLVAPSHSLAKIERSLASSLFPLDQSKSQLYSDLHTPGRYGRVILLAPP
GDNILLQAEGILQTHRAVLEMKVNHKGYNYTFSHLCVLRNQDKKCVLDDIISVLEDLRQA
AVSNKTTARVQVRYPNTKLKDGRNSFIGHQLGGVVEVPNSKDQRVKSARAIQITYYLQTY
GSATQDLIGEKWENEFCKLMKKLQEEHQDFQLYSLASFSLWRDFHKTSILARSKVLVSLV
LILTTATLSSSMKDCLRSKPFLGLLGVITVCISIITAAGIFFITDGKYNSTLLGIPFFAM
GHGTKGVFELLSGWRRTRENLPFKDRVADAYSDVMVTYTMTSSLYFITFGMGASPFTNIE
AVKVFCQNMCVSILLNYFYIFSFFGSCLVFAGQLEQNRYHSIFCCKIPSAEYLDRKPVWF
QTVMSDGHQQTSHHETNPYQHHFIQHFLREHYNEWITNIYVKPFVVILYLIYASFSFMGC
LQISDRANIINLLASDSPSVSYASVQQKYFSNYSPVIGFYIYEPLEYWNSSVQEDLRRLC
SGFTAVSWVEQYYQFLKVSNISASNKSDFISVLQSSFLKKPEFQHFRNDIIFSKAGDESN
IIASRLYLVARTNKDKQKEVIEVLEKLRPLSLSKSIRFIVFNPSFVFMDHYGLSVTVPVL
IAGFGVLLVLILTFFLVIHPLGNFWLILSVTSVELGVLGLMTLWNVDMDCISILCLIYTL
NFAIDHCAPLLYTFVLATEHTRTQCIKSSLQEHGTAILQNVTSFLIGLVPLLFVPSNLTF
TLFKCLLLTGGCTLLHCFVILPVFLTFFPPSKKHHKKKKRAKRKEREEIECIEIQENPDH
VTTV
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgtgctttttaagacggcccggagcgcctgcgagctggatcgggtggaggatgctgcgg
caggtgcttcgcagagggctccagtcgttctgccacaggctgggcttgtgcgtgagccgc
cacccggtctttttcctcaccgtgcccgcagtcctgaccatcaccttcggcctcagcgcg
ctcaaccgcttccagcccgagggcgacctggagcgcctggtcgctcccagccacagcctg
gccaagatcgagcgcagcctggctagcagcctcttccccttggaccagtccaaaagccag
ctctattcggacttacacacccccgggaggtatggcagggtgatcctcctcgccccaccc
ggggacaatattttgctccaggcggaggggatcctgcagacccaccgtgccgtgctggaa
atgaaggtgaaccacaagggctataattatactttttcccatctgtgtgtgttgagaaat
caggataagaaatgcgtgctggatgatattatttcagtgctagaggatctcaggcaggct
gccgtctccaataagacaacagccagggtgcaagtgaggtatcccaacactaaattaaag
gatgggaggaacagttttattggacaccaactgggcggggtagtagaagtgccaaacagc
aaggaccagcgggtcaagtcagccagagccattcaaatcacctactacctccagacctat
ggctctgccacccaagacctcataggggagaagtgggagaatgagttctgtaagcttatg
aaaaagctccaggaggagcaccaggactttcagctctactctttagcatcctttagcctc
tggagagactttcataagaccagcatcttggccagaagtaaggtcctggtgagcctagta
ctgatcctgaccacagccacactctccagctccatgaaggactgtttgcgcagcaagccc
ttcctgggcctcctgggggtgattacagtgtgcatctccattatcacagcagcagggatc
ttcttcatcacggatggaaagtacaactcaaccctgctgggaatcccgttcttcgccatg
ggtcatggaactaaaggagtatttgagctgctatctggatggcggagaactagagagaat
ttacccttcaaagacagggtcgctgatgcctattctgatgtgatggtcacctataccatg
accagctccctgtacttcattaccttcggcatgggagccagcccatttacaaacatcgaa
gctgtgaaggtcttctgtcagaacatgtgtgtctccatcctactgaactacttctacatt
ttctccttctttggctcctgtctagtcttcgctggccaactcgagcagaaccgctaccac
agtatattttgctgtaagatcccttctgctgaatatctggaccgcaaacctgtgtggttc
cagacagtgatgagtgacgggcatcagcagacatcccatcacgagacgaatccttaccag
caccattttatccagcacttccttcgtgaacactacaatgaatggattaccaatatctat
gtaaagccattcgtggtcatcctctatctcatttacgcttccttctccttcatggggtgc
ttgcagatcagcgacagagccaatatcatcaatctgctagccagtgattccccaagtgtt
tcctatgcctccgttcagcagaaatactttagcaactatagccccgtgataggattctac
atctatgagccccttgagtattggaacagcagtgtccaggaggacctccgaagactctgc
agtggattcacagctgtatcctgggtggagcaatattaccagttcctgaaagtgagcaat
atcagtgccagtaataagagtgactttatcagcgttttacagagttcctttttgaaaaag
ccagaatttcaacattttcgaaatgatatcatcttctccaaggcaggggatgagagcaac
atcatagcctctcgtttatacctagtagctaggactaacaaagataagcagaaggaggtc
attgaagtgttggaaaaattgagacccctgtccctctcaaagagcattcggttcatcgtg
ttcaacccttccttcgtgttcatggaccattacggtttgtctgtcaccgtgcctgtgctg
attgcaggctttggtgttctcctggtgttaatcctgacttttttccttgtgattcaccct
ctgggaaacttctggctaattcttagcgtcacctcagttgagctgggtgttctgggttta
atgacattatggaacgtcgacatggactgcatctcgattttgtgccttatctacactttg
aattttgccattgaccactgtgcaccactgctttacacatttgtattagcaactgagcac
acccgaacacaatgtataaaaagttccctgcaagagcatgggacagccattttgcaaaat
gttacttcttttcttattgggttggtccccctcctatttgtgccttcgaacttgaccttc
acactgttcaaatgcttgctgctcaccgggggttgcacacttctgcactgttttgttatt
ttacctgtgttcctaactttctttcccccttccaaaaagcaccacaagaaaaagaaacgc
gccaaacgaaaggagagagaagaaattgaatgcatagaaattcaagagaatcctgatcac
gtcaccacagtctga
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