Sorex fumeus (smoky shrew): 130034520
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Entry
130034520 CDS
T10594
Symbol
VPS36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130034520 (VPS36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfum04131
]
130034520 (VPS36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfum04147
]
130034520 (VPS36)
Membrane trafficking [BR:
sfum04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
130034520 (VPS36)
Exosome [BR:
sfum04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130034520 (VPS36)
Exosomal proteins of colorectal cancer cells
130034520 (VPS36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
GRAM
MA3
BBL5
TssO
Motif
Other DBs
NCBI-GeneID:
130034520
NCBI-ProteinID:
XP_055982079
LinkDB
All DBs
Position
Unknown
AA seq
386 aa
AA seq
DB search
MDRFVWTSGLLEINETLVIQQRGVRIYDGEEKIKFDAGTLLLSTHRLIWRDQKNHECCMA
IPLSQIVFIEEQAAGIGKSAKIVVHLHPAPPGKEPGPFQSSRNSYVKLSFKEHGQIEFYR
RLSEEMTQRRWENMPVSQSLQTRGGSQPGRIRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMVKAKEMVELSKSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETYGSGTQ
YHMQLARQLVGILQAPLEERGGIMSLTEVYCLVNRARGMELLSPEDLVNACKMLDALKLP
LRLRVFDSGVMVIELQSHKEEEMVASALETVSEKGSLTSEEFAKLVGMSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLFMTQS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaccggttcgtgtggaccagcggcctcctggagatcaacgagaccttggtgatccag
cagcgcggggtgcgcatctacgacggcgaggagaagatcaaatttgatgctggaaccctt
cttcttagtacacacaggctaatttggagagatcagaaaaatcatgagtgctgtatggcc
attcctctctcccaaattgtattcattgaggaacaggcagccggaattgggaaaagtgcc
aaaatagtggttcatcttcatccagctcctcctggcaaagaacctggtccattccagagt
agcaggaactcctatgtcaaactctccttcaaagaacatggccagattgagttctacagg
cgtttatcagaggagatgacccagagaaggtgggagaatatgccggtttcccagtcacta
caaacaagaggaggctcccagccaggaagaataagggctgtaggaattgtgggtattgaa
aggaaactggaagaaaagaggaaagaaaccgacaaaaacatttctgaggcctttgaagat
ctcagcaagttaatggtcaaggctaaggaaatggtggagttatcaaaatcaattgctaat
aagattaaagacaaacaaggtgacatcacagaagatgagactatcaggttcaaatcctat
ttgctgagcatgggcatagcgaacccagtgaccagggagacctacggctcgggcacacag
taccacatgcagctggccaggcagctggttggcatcctgcaggcgcctttggaggagcga
gggggcataatgtcactcaccgaggtgtactgcttagtcaaccgcgcccgaggaatggaa
ctgctctcacctgaagacttagtgaatgcgtgcaagatgctggacgcactgaagctgccc
ctcaggctgcgggttttcgatagtggcgtcatggtaattgagcttcagtcccacaaggaa
gaggaaatggtggcctcagccttggagacggtttcagaaaaaggatcactaacctcagaa
gagtttgctaagcttgtaggaatgtctgtcctccttgctaaagaaaggttacttcttgca
gagaagatgggccatctttgccgagatgattctgtggaaggcttgcggttttatccaaat
ttatttatgacacagagttaa
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