KEGG   Sorex fumeus (smoky shrew): 130034564
Entry
130034564         CDS       T10594                                 
Symbol
CDC5L
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
sfum  Sorex fumeus (smoky shrew)
Pathway
sfum03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sfum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130034564 (CDC5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sfum03041]
    130034564 (CDC5L)
   03400 DNA repair and recombination proteins [BR:sfum03400]
    130034564 (CDC5L)
Spliceosome [BR:sfum03041]
 Complex B
  Other components
   Prp19 complex
    130034564 (CDC5L)
 Complex C
   Prp19-CDC5 complex
    130034564 (CDC5L)
DNA repair and recombination proteins [BR:sfum03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    130034564 (CDC5L)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect Rap1_C
Other DBs
NCBI-GeneID: 130034564
NCBI-ProteinID: XP_055982154
LinkDB
Position
Unknown
AA seq 802 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKAAQRDNEEETTDDP
RKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIEIQKKRKKKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFR
KLRQQDLDGELRSEKEGRDRKKDKQHLKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAP
QISDAELQEVVKVGQASEIARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPASQD
RILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSQGS
EGLTPRSGTTPKPVINSTPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGL
MGLPAPKNDFEIVLPENAEKELEEREVDDTYIEDAADVDARKQAIREAERVKELKRMHKA
VQKDLPRPSEVNETILRPLNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKG
KTVGFGTNNSEHIAYLEHNPYEKFSKEELKKAQDILVQEMEVVKQGMSHGELSSEAYNQV
WEECYSQVLYLPGQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKIL
LGGYQSRAMGLMKQLNDLWDQIEQAYLELRTFEELKKHEDSAIPRRLECLKEDVQRQQDR
EKELQHRYADLLVEKESLKSKF
NT seq 2409 nt   +upstreamnt  +downstreamnt
atgccgcgcatcatgatcaaggggggcgtgtggaggaacacggaggatgaaattctcaaa
gcagcggtaatgaaatatggcaagaaccagtggtctcggattgcctcattgctgcataga
aaatcagcaaagcagtgcaaagccagatggtacgagtggctggatcctagcattaaaaaa
acagaatggtccagagaagaggaggaaaagctcttacacttggccaagttgatgccaact
cagtggaggaccattgctccaatcatcggaagaacagctgctcagtgcttggaacactat
gaatttcttctggataaggctgcccagagagacaatgaagaggaaacaacagatgatcca
agaaaacttaaacctggagaaatagatccaaatccagaaacaaaaccagcacggcctgat
ccaattgacatggacgaggatgaacttgagatgctttctgaagctagagcccgcctggct
aatactcagggaaagaaggccaagaggaaagcaagagagaaacagttggaagaagccagg
cgtcttgctgctctccaaaagaggcgagaacttcgagcagctggcatagaaattcagaag
aaaagaaaaaagaagagaggcgttgattataatgctgagattccatttgaaaaaaagcct
gctcttggtttctatgatacttctgaggaaaactaccaggctcttgatgcagatttcaga
aaattaagacagcaggatcttgatggggaactaagatctgaaaaagaaggaagagataga
aaaaaagataagcaacatttgaaaaggaaaaaagaatctgatttaccatcagctattctt
caaactagtggtgtttctgagttcactaaaaagagaagcaagttagtacttcctgcccct
cagatttcagatgcggaactccaggaagttgtaaaagtaggtcaagcaagtgaaattgca
cgtcagactgctgaggaatctggcataacgaactctgcttccagtacccttttgtctgag
tacaatgtcaccaacaacagcattgctcttagaacaccacgaactccagcttcccaggac
agaattctgcaggaagctcaaaacctcatggccctgaccaatgtggataccccattgaaa
ggtggacttaacacccctttgcacgagagtgacttctcaggtgtgacaccacagcggcaa
gttgtacagactcctaacacggttctttccaccccgttcagaactccttctcaaggttct
gaagggctaactcctcgcagtggaacaactcccaaaccagttattaactccacccctgga
agaactcctcttagagacaagttaaacattaatcctgaggatggaatggcagactacagt
gatccctcttacgtgaagcagatggaaagagagtctcgtgaacacctgcgtttgggcttg
atgggccttcctgctcccaagaatgactttgaaatcgttctgccagaaaatgccgagaag
gagctggaagagcgtgaagtagatgatacttacattgaagatgctgccgatgtggatgca
cgaaagcaggccatacgagaagctgagcgtgtaaaggaattgaaaagaatgcacaaagcg
gtacagaaagatctgccaagaccctcagaagtaaatgaaactattttaagacccttaaat
gtggaaccacctctaacagatttacagaagagtgaagaactaatcaaaaaggaaatgatc
acaatgcttcattatgatcttctacatcatccttacgaaccatctggaaataaaaaaggg
aaaacagtaggatttggtaccaataattcagagcacattgcctatctggaacataaccct
tacgaaaagttctctaaagaagagctgaaaaaggcccaggacattctggtacaggagatg
gaagtggtcaaacagggaatgagccatggagaactctccagtgaagcttacaaccaggtg
tgggaagaatgctacagtcaagtgttgtatcttcccgggcagagccgctacactcgggcc
aatctagctagcaaaaaggacagaatcgagtcgcttgaaaagagacttgagataaatagg
ggtcatatgacaacagaagccaaaagagctgcaaagatggaaaagaagatgaaaatcttg
cttgggggttaccagtctcgtgccatggggctcatgaaacagttaaatgacttgtgggac
caaattgagcaggcctacttggagttacgcacttttgaagaactcaagaaacatgaagat
tctgccatcccccggaggctagagtgtctgaaagaagatgttcagcgacagcaggacaga
gaaaaggaacttcagcatagatatgctgatttgctggtggaaaaggaatctttgaagtcc
aaattctga

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