Sorex fumeus (smoky shrew): 130035033
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Entry
130035033 CDS
T10594
Name
(RefSeq) small nuclear ribonucleoprotein F-like
KO
K11098
small nuclear ribonucleoprotein F
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130035033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfum03019
]
130035033
03041 Spliceosome [BR:
sfum03041
]
130035033
03032 DNA replication proteins [BR:
sfum03032
]
130035033
Messenger RNA biogenesis [BR:
sfum03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
130035033
Spliceosome [BR:
sfum03041
]
Complex A
U1 snRNP components
Sm proteins
130035033
U2 snRNP components
130035033
Complex B
U1 snRNP components
130035033
U4/U6.U5 tri-snRNP components
130035033
Complex C
U2 snRNP components
130035033
DNA replication proteins [BR:
sfum03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
130035033
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
130035033
NCBI-ProteinID:
XP_055982494
LinkDB
All DBs
Position
Unknown
AA seq
141 aa
AA seq
DB search
MTLPLNPEHFLNELTEKPLMGKFKLGMEFQGYPESADGCMNVQLANTKGYRDGVLSGHLS
VVLIRCSNVLYTRNIEEEEEDGVIREQRSRPPAPPRLLARPGRSRPSRGPAPGEAPPPSR
ERAPLPPRTRHHREGPARAAP
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atgactttgcccctcaatcccgaacatttcctcaatgaattaacagaaaaaccattaatg
gggaaatttaagttgggaatggagttccagggctacccagagtctgcagatggctgcatg
aacgtgcagcttgcaaatacaaaagggtacagagacggagtattgtctggacatctgagt
gttgttttaataaggtgtagtaatgtcctttataccagaaatattgaagaagaggaagaa
gatggggtaataagagaacagcgaagtcggccccccgccccccctcgcctgctggcccgg
cccggccgctcccgcccctcgcgcggccccgcccccggcgaggccccgcccccgtcccgg
gaacgcgcgccgctcccgccgcgtacccgccaccatcgagagggcccggcgcgggcggcc
ccgtga
DBGET
integrated database retrieval system
