Sorex fumeus (smoky shrew): 130035107
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Entry
130035107 CDS
T10594
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04142
Lysosome
sfum04144
Endocytosis
sfum04721
Synaptic vesicle cycle
sfum04961
Endocrine and other factor-regulated calcium reabsorption
sfum05016
Huntington disease
sfum05100
Bacterial invasion of epithelial cells
Brite
Membrane trafficking [BR:
sfum04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
130035107 (CLTC)
Exosome [BR:
sfum04147
]
Exosomal proteins
Proteins found in most exosomes
130035107 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130035107
NCBI-ProteinID:
XP_055982567
LinkDB
All DBs
Position
Unknown
AA seq
1682 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWGSVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNYFS
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQE
EKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDAIKEKVDKL
DASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGY
SM
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattctgccaattcgttttcaggagcatctccagctccagaacctgggtata
aatccagcaaacattggattcagtaccctgactatggagtcagacaaattcatctgcatt
agagagaaagtaggagagcaggcccaggtggtaatcattgatatgaatgatccgagtaat
ccaattcgaagaccaatttcagcagacagtgccatcatgaatccagcaagcaaagtaatt
gcgctaaaagctgggaaaactcttcagatatttaacattgaaatgaaaagtaaaatgaag
gcgcataccatgactgatgatgtcaccttctggaagtggatctctttgaatacagttgct
cttgtgacggataatgccgtttatcattggagtatggaaggagagtctcagccagtgaaa
atgtttgatcgccattccagccttgcgggatgccagattatcaattatcgtacagatgca
aaacaaaagtggttacttctaactggtatatctgcacagcaaaatcgtgtggttggagcg
atgcagttatattcagtggataggaaagtgtctcagcccattgaaggacacgcagccagt
tttgcacaatttaagatggaaggaaatgcagaagaatcaacgttgttttgttttgcagtc
cggggtcaagctggaggaaagttacatattattgaagttggcacaccacctacagggaac
cagccttttccaaagaaggcagtggatgttttctttcctccagaagcacaaaatgacttt
cccgttgctatgcagataagtgaaaagcatgatgtagtattcttgattactaagtatggt
tacatccacctctacgatcttgagactggaacctgcatctacatgaatagaatcagtgga
gaaacaatctttgttactgcacctcatgaagccactgctggaataattggagtaaacaga
aagggacaagttctgtctgtgtgtgtggaagaagaaaacataattccttatatcactaat
gtcttacaaaatcctgatttggctctgagaatggctgtacgtaacaacttagctggagct
gaagaactctttgcccggaaatttaacgctctctttgcccagggaaattactcagaggca
gcaaaggtggctgctaatgccccaaagggaatccttcgtaccccagataccatccgtcgg
ttccagagtgtcccagcccagccaggtcaaacttctcctttacttcagtactttggaatc
cttttggaccagggccagttaaacaaatatgaatctttggaactgtgtaggcctgtactt
cagcaggggcggaaacagcttttggaaaaatggctaaaagaagacaagctggagtgttct
gaagaactcggtgaccttgtgaaatctgtggaccctacactggcacttagtgtataccta
cgggccaatgtccccaataaagtcattcagtgttttgcagaaacaggtcaagtccagaag
attgttttatatgctaaaaaagtgggatatactccagactggatcttcctgctgagaaat
gtcatgcggatcagcccagatcaaggacagcagtttgctcaaatgttagttcaggatgaa
gaacctcttgctgatatcactcagattgtggatgtcttcatggaatacaatctaattcag
cagtgtactgcattcttgcttgatgctttgaagaacaaccgcccatctgaaggtccttta
cagacacggttgcttgagatgaatcttatgcatgcacctcaagttgcagatgctattcta
gggaaccagatgttcacccattatgaccgagctcatattgctcagctgtgtgagaaggct
ggtcttctgcagcgtgcattggaacacttcactgatctgtatgatataaagcgtgcagtt
gttcatacccatcttcttaaccctgagtggcttgtgaattactttgggtccttatcagta
gaagactccctggaatgtctcagggccatgctttctgccaatatccgtcagaatctacag
atctgtgttcaggtggcttctaagtatcatgaacaactgtcaactcagtctctgattgaa
ctttttgaatctttcaagagttttgaaggtctcttttattttctgggatccattgttaac
tttagtcaggacccagatgtgcactttaaatatattcaggcagcttgcaagactgggcag
atcaaagaagtagaaagaatctgtagagaaagcaactgctatgatcctgagcgagtcaag
aattttctcaaggaagcaaagctaacagatcaactgccacttatcattgtgtgtgaccga
tttgacttcgttcatgatttggtgctctatttatatagaaataatctccagaagtatata
gaaatatatgtacagaaggtgaatcccagtcgacttcctgtggttattggagggttactt
gatgttgattgttcagaagatgtcatcaaaaatttgattcttgttgtaagaggtcaattc
tctactgatgagcttgttgcagaagttgaaaagagaaacagactgaaactgcttctgcct
tggctagaggccagaattcatgagggctgtgaggaacctgctactcacaatgcattagcc
aaaatttacatagacagtaataacaacccagagaggtttcttcgagaaaatccttactat
gacagccgtgttgttggaaagtattgtgagaaaagagatccacatctggcctgtgttgct
tatgaacgtggccagtgtgatctggaacttatcaatgtttgcaatgagaattcccttttc
aaaagtctttcccgctatctggttcgccgaaaggatccagaattgtggggtagtgttcta
ctggaaagcaatccctacaggagaccccttattgaccaggttgtacagacagcattgtct
gagactcaagaccctgaagaagtatcagtgactgtcaaggcttttatgactgcagatctg
cctaatgaactcattgaactgctagagaaaattgtccttgataactctgttttcagtgaa
cacaggaatcttcaaaacctcctcatcctcacggcaattaaggctgaccgtacacgcgtt
atggagtatattaaccgcctagataattatgatgctccagatattgctaatatcgccatc
agcaatgagctctttgaagaagcatttgctattttccggaaatttgatgtcaatacttca
gcagtgcaggtcttgattgaacatattgggaacttggatcgggcatatgaatttgctgaa
cgctgcaatgagcctgcagtctggagtcagcttgcaaaagcccagctccagaaaggcatg
gtgaaagaagccattgattcttatatcaaagcagatgatccttcatcctacatggaagtt
gttcaggctgccaatacaagtggaaactgggaggaactggtgaagtacttgcagatggcc
cgtaagaaggctcgagaatcctatgtggagacagaattgatattcgcactggccaaaaca
aaccgccttgcagaattagaagaattcatcaatgggccaaataatgctcatatccagcaa
gttggagaccgttgttatgatgaaaaaatgtatgatgctgctaagttgttgtacaataat
gtttccaattttggacgcttggcatctaccctggttcacctgggtgaatatcaggcagct
gttgatggagctaggaaagctaatagtacacgaacatggaaagaggtctgctttgcttgt
gtagatgggaaagagttccgtcttgctcagatgtgtggacttcatattgtagtacatgca
gatgaattggaagaactcatcaactactatcaggatcgtggatattttgaagaacttatt
accatgttggaagcagcactgggacttgagcgtgcacacatgggaatgtttaccgaatta
gctattttatattctaaatttaagccacagaaaatgagagagcatctggaactgttctgg
tcaagagtgaatattcctaaggtgctaagagctgcagaacaagctcatctttgggcagaa
ttggtgtttttgtatgacaaatatgaagagtatgataatgccatcattactatgatgaat
catccaactgatgcatggaaagaaggacagttcaaagatatcattaccaaggttgccaat
gtggaactatactacagggcaatacagttctacttagaattcaagcctcttttgttaaat
gatttgctgatggtgctgtctccacggttggatcatactcgtgcagtcaattatttcagc
aaggttaaacagctaccattggtgaaaccatatttgcgttcagttcagaatcacaacaac
aaatctgtgaatgaatcactgaacaacctctttattacagaagaagattatcaggctctg
cggacatcgatagatgcttacgataactttgacaacatctcgcttgctcagcgtttggag
aagcatgagctcattgaattcagaagaattgctgcttatctcttcaaaggcaacaatcgt
tggaaacagagcgtagaactgtgcaagaaagatagcctgtacaaggatgcaatgcagtat
gcctctgaatcaaaagacactgagttggctgaagaactactacagtggtttttgcaggaa
gaaaaaagagagtgctttggagcttgtctctttacctgttacgatcttttaaggccagat
gttgtcttggaaactgcctggaggcacaatatcatggattttgcaatgccctatttcatc
caggtcatgaaggaatacttgacaaaggttgatgcaataaaggaaaaggtggataaatta
gatgcttcagaatcactgagaaaagaagaagaacaggctacagagacgcaacctattgtt
tatggtcagccccagttgatgctgacagcaggacccagtgttgcagttcctccccaggca
ccttttggctatggttatactgcaccaccctatgggcagccacagcctggctttgggtac
agcatgtga
DBGET
integrated database retrieval system
