Sorex fumeus (smoky shrew): 130035119
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Entry
130035119 CDS
T10594
Symbol
HDAC5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04371
Apelin signaling pathway
sfum04613
Neutrophil extracellular trap formation
sfum05034
Alcoholism
sfum05203
Viral carcinogenesis
sfum05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
130035119 (HDAC5)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
130035119 (HDAC5)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
130035119 (HDAC5)
05203 Viral carcinogenesis
130035119 (HDAC5)
09165 Substance dependence
05034 Alcoholism
130035119 (HDAC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfum03036
]
130035119 (HDAC5)
Enzymes [BR:
sfum01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
130035119 (HDAC5)
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
130035119 (HDAC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
TFIIA
Motif
Other DBs
NCBI-GeneID:
130035119
NCBI-ProteinID:
XP_055982581
LinkDB
All DBs
Position
Unknown
AA seq
1116 aa
AA seq
DB search
MLLVPKAQGLVEMLQTIYETESCFSADGMSGREPSLEILPRTPLHSIPVAVEVKPVLPGA
MPSSMGGGGGGSPSPVELRGALAGPVDPALREQQLQQELLALKQQQQLQKQLLFAEFQKQ
HDHLTRQHEVQLQKHLKQQQEMLAAKRQQELEQQRQREQQRQEELEKQRLEQQLLILRNK
EKSKESAIASTEVKLRLQEFLLSKSKEPTPGGLNHSLPQHPKCWGAHHASLDQSSPPQSG
PPGTPPSYKLPLLGPYDSRDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGTVI
STFKKRAVEIAGAGPGVTSVCSSAPGSGPSSPNSSHSTIAENGFTGSVPNIPTEMLPQHR
ALPLDSSPNQFSLYTSPSLPNISLGLQATVTVTNSHLAASPKLSTQQEAERQALQSLRQG
GALTGKFLSTSSIPGCLLGVALEGDPGPHGHASLLQHVLLLEQARQQSTLIAVPLHGQSP
LVTGERLATSMRTVGKLPRHRPLSRTQSSPLPQSPQALQQLVMQQQHQQFLEKQKQQQLQ
LGKILTKTGELSRQPTTHPEETEEELTEQQEALLGEGALTIPREGSTESESTQEDLEEEE
EEEEEEEDCIQVKDEGESGAEEGPDLESSTAYKKLFSDAQQLQPLQVYQAPLSLATVPHQ
ALGRTQSSPAAPGGMKSPADQPTKHLFTTGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSI
WSRLQETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKLDSKKLLGPISQK
MYAMLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVAAGELKNGFAIIRPPGHHA
EESTAMGFCFFNSVAITTKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHR
YDNGNFFPGSGAPEEVGGGPGMGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSP
DVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDA
SEACVSALLSVELPPLDEAVLQQKPNVNAVATLEKVIEIQSKHWSCVQRFAAGLGRSLRE
AQAGETEEAETVSAMALLSVGAEQAQAAAAREHSPR
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggtgcccaaggctcaggggctcgtggagatgctgcagaccatctatgagacg
gaatcgtgtttctcagcagatgggatgtcaggccgggaaccgtccctggagatcctgccg
cggacccccctccacagcatccctgtggcagtggaggtgaagccggtgctgccgggggcc
atgcccagctccatggggggcgggggcggaggcagccccagccccgtggagctgcggggg
gcgctggcaggtcccgtggaccccgcgctgcgggagcagcaactgcagcaagagctgctg
gccctgaagcagcagcagcagctgcagaagcagctcctgttcgccgagttccagaaacag
cacgaccacctgacccggcagcatgaggtccagctccagaagcacctcaagcagcagcag
gagatgctggccgccaagaggcagcaggagctggagcagcagcggcagcgggagcagcag
cggcaggaggagctggagaagcagcggctggagcagcagctgctcatcctgcggaacaag
gagaagagcaaagagagcgccatcgccagcactgaggtgaagctgcggctgcaggaattc
ctcctgtccaagtcaaaggagcccacgccaggcggcctcaaccattccctcccacagcac
cccaaatgctggggagcccaccatgcttctttggaccagagttcccctccccagagcggc
cccccagggacgcctccctcctacaaactgcctttgctcgggccctatgacagccgggac
gacttccccctccgcaagacagcctctgaacccaacctgaaggtgcgttcgaggctaaag
cagaaggtggcggagcggcggagcagtcccctcctgcgccgcaaggacggcacggtcatc
agcaccttcaagaagagagccgtggagatcgccggggccgggcccggggtgacctctgtg
tgcagcagcgcccccggctctggccccagctcccccaacagctcgcacagcaccatagcc
gagaacggctttaccggctccgtccccaacatccctaccgagatgctcccccagcaccgg
gccctccctctggacagctcccccaaccagttcagcctctacacgtccccctctctgccc
aacatctccctagggctgcaggccacggtcaccgtcaccaactcgcacctcgctgcctcc
ccaaagctgtccacgcagcaggaggccgagaggcaggccctccagtccctgcggcagggc
ggcgcactgaccggcaagttcctgagcacctcgtccatccccggctgcctgctgggcgtg
gcgctggagggcgacccgggcccccatgggcacgcctccttgctgcagcacgtgctgctc
ctggagcaggcccggcagcagagcaccctcatagccgtgccgctccacgggcagtcccca
ctggtgacgggtgaacgcttggccaccagcatgcggacggtgggcaagctcccccggcac
cggcccctgagccgcacgcagtcctcgccgctccctcagagcccccaggccctgcagcag
ctggtcatgcagcagcagcaccaacagttcctggagaagcagaagcagcagcagctgcag
ctgggcaagatcctcaccaaaaccggggagctgtcccggcagcccaccacccaccccgag
gagactgaggaggagctaacggagcagcaggaggccttgctcggggagggagccctgacg
atcccccgggagggctccacggagagcgagagcacacaggaagacctggaggaggaggag
gaggaggaagaggaggaggaagactgcattcaggtcaaggatgagggcgaaagtggcgcc
gaggagggtcctgacctggagtccagtactgcgtacaaaaagctcttctcagatgcccag
cagctgcagcccctacaggtgtaccaggcacccctcagcctggccactgtaccccaccag
gccttgggccgcacccagtcctcccctgctgcccccgggggcatgaagagccccgcagac
cagcccaccaaacacctcttcactacaggtgtggtctacgacacgttcatgctgaaacac
cagtgcatgtgtgggaacacacatgtgcaccccgagcacgccggccgcatacagagcatc
tggtcgcggctgcaggagacgggcctgctcagcaagtgtgagcggatccgggggcgcaaa
gccacgctggacgagatccagacggtgcactcggagtaccacaccctgctctatgggacc
agcccccttaaccgacagaagctggacagcaagaagctgctcggccccatcagccagaag
atgtacgccatgctgccttgtgggggtattggggtagatagtgacacggtgtggaacgag
atgcactcctccagtgccgtgcgcatggcggtgggctgcctggtggagctggccttcaag
gtggcggccggagagctcaagaatggatttgccatcatccgacccccaggacaccacgcc
gaggagtccacagccatgggattctgcttctttaactctgtagccatcacaaccaaactc
ttgcagcagaagctgaacgtgggcaaggttctcattgtggactgggacattcaccatggc
aacggcacacagcaggccttctacaatgacccctccgtgctctacatctccctgcatcgc
tatgacaacgggaacttctttccaggctctggggctcccgaagaggttggcggagggccg
ggcatggggtacaatgtgaacgtggcatggacgggaggtgtggacccccccatcggagac
gtggagtacctaacggccttcaggacagtggtgatgcccattgcccacgagttctcaccg
gacgtcgtcctggtctctgctgggtttgacgctgtcgagggacacctgtctccgttgggt
ggctactcggtcaccgccagatgttttggtcacttgaccaggcagctgatgacgctggca
gggggccgggtggtgctggctctggagggaggccacgatctgaccgccatctgtgacgcc
tctgaggcctgcgtctcggctctgctgagtgtggagctcccgcccttggacgaggcagtc
ctgcagcagaagcctaatgtcaacgcggtggccacgctcgagaaagtcattgagatccag
agcaaacactggagctgtgtgcagaggttcgctgccggcctaggtcgatccctgcgcgag
gcccaggccggggagacggaggaggccgagactgtgagtgccatggccttgctgtcggtg
ggggccgagcaggcccaggcggcggcagcgcgggaacacagccccaggtaa
DBGET
integrated database retrieval system
