Sorex fumeus (smoky shrew): 130035183
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Entry
130035183 CDS
T10594
Symbol
DENND4A
Name
(RefSeq) C-myc promoter-binding protein isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfum04131
]
130035183 (DENND4A)
Membrane trafficking [BR:
sfum04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
130035183 (DENND4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_long
PPR_3
PPR
Papo_T_antigen
Motif
Other DBs
NCBI-GeneID:
130035183
NCBI-ProteinID:
XP_055982706
LinkDB
All DBs
Position
Unknown
AA seq
1915 aa
AA seq
DB search
MIEDKGPRVADYFVVAGLTDVSKPLEEEIHFNDACHKVAKPKEPITDVSVIMKSLGEEVP
RDYVCIDVTPSGLSADLNNGSLVGPQTYLCYKRGRDKPPLTDLGVLYDWKERLKQGCEII
ETTPYGRPANISGGTSSQRVYITYRRASENMTQNTLAVTDICIIIPSKGESPPHTFCKVD
KNLSNSMWGSAVYLCYKKSVAKTNTISYKAGLICRYPQEDYESFSLPESVPLFCLPMGAT
IECWPPNSKYPLPVFSTFVLTGASAEKVYGAAIQFYEPYPEENLAEKQRLLLGLTSSADG
KSDSSKTIQTNKCICLLSHWPFFDAFRKFLTFLYRYSISGPHVLPIEKHISHFMHKVPFP
SPQRPRILVQLSPHDNLILSQPVSSPLPLSGGKFSTLLQNLGPENAVTLLVFAVTEHKIL
IHSLRPSVLTSVTEALVSMIFPFHWPCPYVPLCPLALADVLSAPCPFIVGIDSRYFDLYD
PPPDVSCVDLDTNTISQIGDKKNVAWKILPKKPCKNLMNTLNNLHQQLAKLQQRPRDDGL
MDLATNDYDFNSGKRLHMIDLEIQEAFLFFMASILKGYRSYLRPITQAPSETATDASSLF
ALQAFLRSRDRSHQKFYNLMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKVDMDKSGE
VRLIELDESFKSEHTVFVTPPEIPRLPDGEEPPLQYSYNGFPVLRNNLFERPEGFLQTRK
SKLPSKASNPGSPSPMFRRTKQEIKSAHKIAKRYSSIPQMWSRCLLRHCYGLWFICLPAY
VKVCHSKVRALKTAYDVLRKMQSKKMDPPDEVCYRILMQLCGQYNQPVLAVRVLFEMHKA
GIDPNAITYGYYNKAVLESTWPSRSRSGDFLWTKVRNVILGVAQFKRVLKKHRHLSQTIL
SADGSDLDTVSHGSMDSARGTHTMEQAPLSTGLIKVYGTEDRASTGGQSDLGYNSLSKDE
IIPGTTSSEDIQGEKDKKGSDSSSVSESESAKGSADCLPKLNYQSTSSIVRSSKNSAEKL
SGESVESTSDLLLISSLKNANEIGSIPSRCFRKRHKSDNEPNLQSQMSWGNRNHSLSGGV
LMGLMLNRINQEADPGDMVEKLGADAKILSNAITENTRPNSLDIGKPPLRSKRDSLEKES
SDEDTPFDGSHSLMEKVDSPVIFDLEDIDSETDGAKVGYVMSQHPKKLQHMNSSFSVKPF
EKTNVVTGFDPLSLLVAETEQQQKEEEEEEEDDSKSVSTPSARRDLAEEIVMYMNNMSSP
LTSRTPSVDLQRACEDKGTTKKSPTLVKTCRRSSLPPNSPRPARLTKSKSYTKSDDRPRD
RLWSSPAFSPTCPFREDSQDALTHSSPSFNLDTLIVPKLDVLRNSMFTAGKGVAEKASKW
YSRFAMYTTSSKDQSSDRTSLSSAGAQDSESASLTDEDACHDLEGATSSQEISTTSGTKG
TDINRISLESSASLEGSLSKFALPGKSEVASSCSTSNANIFQNYAMEVLISSCSRCRTCD
CLVHDEEIMAGWTADDSNLNTTCPFCGNLFLPFLNIEIRDLRRPGRYFLKSSPSAENLHL
PSSLSSQTRQSCISASASGLNTSVVSVQGNFDLNRKSKLLESSCARSIQIPTDRSNAALS
KCPIFPMARSVSTSCSLDKDDTGRQKLIPTGSLPATLQGATDSLGLEWHLPSPDPITVPY
LSPLVVWKELESLLENEGDHAITVADFVDHHPIVFWNLVWYFRRLDLPSNLPGLILSSEH
CNKYSKIPRHCMSEDSKYVLIQMLWDNMKLHQDPGQPLYILWNAHSQNRTLLFETQKYPM
VHLLQKGDNSFNQELLKNMVKSIKMNDVYGPMSQILETLNKCPHFKRQRSLYREILFLSL
VALGRENIDIDAFDKEYKMAYDRLTPSQVKSTHNCDRPPSTGVMECRKTFGEPYL
NT seq
5748 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagacaagggccctcgagttgctgactattttgtggtggcaggattgactgat
gtctcaaagcctctggaagaggaaattcacttcaatgatgcctgccacaaagtagctaag
ccaaaggaacctatcactgatgtttcagttattatgaaatctcttggggaggaagttccg
cgggattatgtttgtattgatgtcaccccaagtggactatccgctgacctcaataatgga
agtcttgtgggtccacagacttacctctgctataaaagaggaagagataaacctccactt
acagatctgggggtcttgtacgactggaaagaacgcttgaaacaaggctgtgaaatcatt
gagactactccctacggacgccctgccaacatcagcgggggcacgtcttcacagcgggtc
tacatcacttaccggagagcctctgagaacatgacccaaaacacgctggctgtcacagac
atatgcattatcatacccagtaagggagaaagccctccacacacattctgtaaggtggac
aagaacctcagtaatagtatgtgggggtcagctgtgtacttatgttataaaaaatcggtg
gcaaagactaatactatatcatacaaagctggtctaatttgtaggtatcctcaagaagat
tatgagtcattctcactaccagaatctgttcccctattttgtttaccaatgggcgcaacc
attgaatgttggccaccaaatagcaaataccctctcccagtattttctacttttgtgtta
actggagcctcagctgaaaaggtctatggtgctgctattcagttctatgaaccataccct
gaagaaaatctcgcagaaaagcagagacttcttttgggcttaacttcatcagcagatggg
aagtctgacagttccaaaacaatccagactaataagtgcatctgtctcctttcccactgg
cctttctttgatgcgttcagaaaatttctgactttcctgtatcgttattccatctctgga
cctcacgtgcttcccattgagaagcatatttctcattttatgcataaagttccttttcca
tctcctcagagaccacggattttagttcagttatcaccacatgataatctgattctcagc
cagcctgtgtcgtcacctcttccactcagtggtggaaagttttcaacactactccagaat
ttaggccctgaaaatgctgtgactctgctggtgtttgcagtgaccgagcacaagattctc
attcattccctgcggccctccgtgctcactagtgtaacagaggccctggtatccatgatt
ttccctttccactggccgtgtccctatgttcctctctgcccactggctctagccgacgtc
ttgagtgcaccgtgccctttcatagtaggaattgattccagatactttgatctctatgac
cccccaccagatgttagttgtgttgatctagataccaacaccatttcacaaattggtgac
aagaaaaatgtagcctggaagatacttccaaagaagccatgtaaaaatctgatgaacaca
ctgaataatttgcatcagcaactggcaaagttgcagcagagaccaagagacgacggactg
atggatctcgccacgaatgactatgattttaattccggaaagagattgcatatgatagat
ttggaaatccaagaggcatttttgtttttcatggcttcaattttaaaaggctacaggtca
tacttaagaccaataactcaagccccgtctgagacagccacggatgccagctctctgttt
gctcttcaagctttcttaagaagccgggaccggtcacatcaaaaattttataacttgatg
accaaaacacaaatgttcattcgcttcattgaggaatgttcttttgtcagtgataaagat
gcgagcctggcgttttttgatgattgtgtagataaagtggatatggataagagcggtgaa
gtccgactgatagaactagatgagtctttcaaaagtgaacatactgtttttgtgacccca
cctgagatcccccgccttcccgatggtgaagaacctccgctacagtacagctataatgga
tttccagttcttaggaacaatttatttgagagacctgaaggttttctgcaaacacgaaag
agcaagttgccttccaaagcaagtaatccaggcagtccgtcacccatgttcaggagaacc
aaacaggaaattaaatcagcccataaaattgccaagaggtattcgtccatcccgcagatg
tggtctcggtgtctgctgaggcactgttacgggctgtggtttatctgtctcccagcgtat
gtgaaagtctgtcactcgaaagtcagggctctgaaaaccgcatatgatgtgctccggaaa
atgcagtcaaagaagatggatcctcccgatgaggtgtgctacagaatcctcatgcaactc
tgcggacagtacaatcagcctgtacttgcagtccgagtgctttttgaaatgcataaagct
ggtattgaccccaatgccattacatatggttattataataaggctgttttggaaagcacc
tggccttcccgaagccgtagtggcgattttctttggacaaaagtaagaaatgttatttta
ggagtagcacagttcaaaagagtgctgaagaaacaccggcatttatcacaaacaattctc
tcagcagatggcagtgacctggacaccgttagtcacggcagcatggacagtgctcgtgga
actcacactatggaacaggcacctttgagcacgggtttaatcaaagtgtatggtactgag
gatagagctagtacaggtggccagtctgatcttggatataattcattatccaaagatgaa
attataccagggactacatctagtgaagacattcagggagaaaaagataagaaagggagt
gattctagttccgtgtcagagagtgagagtgcaaaaggaagtgccgattgtcttcctaaa
ctcaattaccaaagtacttccagtatagttcgctcaagtaagaacagcgctgaaaaacta
tcaggagaaagtgtggaaagcacctcagacctgctcttaatatcatctcttaagaatgca
aacgaaataggaagcattccaagtagatgcttcaggaaaagacataaaagtgacaatgaa
cctaatttgcaatcacaaatgtcctggggaaatcggaaccacagtctcagtggtggagtt
ctgatgggacttatgctcaacagaattaaccaggaagcagaccctggtgatatggtagag
aaattaggagccgatgcaaagatcctctcaaatgctatcacagaaaacacaaggccaaat
agccttgatattggaaagccgcctttaagatcaaaaagagacagtctcgaaaaggaatcc
agtgatgaggacaccccttttgatggttctcattctctcatggagaaagtagattcaccc
gtgatttttgacctcgaagacatagacagtgaaaccgatggagcgaaagtggggtatgtt
atgagccagcaccccaagaaacttcagcatatgaacagcagcttttcggtgaagcctttt
gaaaaaaccaatgtggtgacgggatttgaccccctctctcttttggttgctgagacagaa
caacagcaaaaagaggaggaggaagaggaggaagacgatagcaaaagcgtttcaaccccc
tcagctcggcgggatctagctgaggagattgtgatgtacatgaacaacatgagcagccct
ttgacaagccggaccccaagtgttgatttacagcgggcatgtgaggataaagggaccaca
aagaaaagtccgactttggtcaagacgtgtaggaggtcgagcctgcctccgaattctccc
aggccagccaggcttaccaaatctaaaagttacaccaaaagtgacgacaggccacgggat
agactctggtcttctccagccttctcaccaacttgtccatttcgggaagactctcaggat
gcattaacccattcgtcaccttcctttaatttagataccctgatcgtacctaaattggat
gttctgaggaacagtatgtttactgcaggaaaaggagttgcagagaaagcaagcaaatgg
tattcaagatttgccatgtacaccacatcatctaaggatcaaagttctgatcgtaccagt
ctttcttcagcgggagcccaggactctgaatctgcctctctaacagatgaagatgcctgc
catgacctggaaggagccacttcttcccaggagatcagcaccacttccgggacgaaggga
actgatatcaacagaataagcctggaaagttctgcctccttagaaggatccctgtcaaag
tttgccttgcctggaaaatcagaagtagcgtcttcctgcagcacaagcaatgcaaacatc
ttccagaactacgcaatggaggttctcatctccagttgctctcggtgtagaacttgtgac
tgtcttgtccatgatgaggaaatcatggctggctggaccgcagatgactcaaatctcaac
acgacttgtccgttttgtggcaatcttttcctaccctttctgaatattgaaataagagat
ttaagaagacctggaagatactttctgaaatcgagcccatcagcagaaaacctgcatctt
ccgtcctctctgtccagtcagacaaggcagtcctgcatctctgcatcagcctccggtctc
aacacatctgtggtctctgttcaagggaattttgatctaaatcgcaaatctaaactgctg
gaaagttcatgtgcccgaagtattcagatccctacggataggtcaaatgcagctctgtca
aaatgtccaatattcccaatggccaggagtgtaagcacttcctgttctttggataaggat
gacactgggagacagaagctcatcccaacaggcagcctgccagccactctacaaggagct
acagattccttggggttggaatggcacctccctagcccagaccctatcactgttccatac
cttagtcctttggtggtatggaaggaacttgaaagcttactggaaaatgaaggcgatcac
gcaataacggtggcagactttgtggaccatcatccaattgtattttggaacctggtgtgg
tattttagacgtcttgatttgcccagtaacttacctggattgattctttcttctgagcac
tgtaacaagtattcaaagattcctcgccactgtatgtctgaagatagtaaatatgtcctg
atccagatgttgtgggacaatatgaagttgcatcaggaccccggccagcccctgtacatc
ctctggaatgcgcacagtcaaaatcgtactcttttgtttgagacccagaagtatccaatg
gtccacttattgcaaaaaggtgataattcatttaaccaggagctcttgaaaaatatggta
aaaagcataaaaatgaatgatgtctatgggccaatgagtcaaattttagaaacactgaat
aagtgtcctcactttaaaagacagaggagtttatatagagaaatactatttctgtcactt
gtggcattgggaagagaaaacattgatatcgatgcttttgataaagagtacaagatggcg
tacgaccggctcaccccaagtcaggtcaagagcacccacaactgtgacaggcccccgagc
acgggtgtgatggaatgccgcaagaccttcggagaaccttatctttag
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