Sorex fumeus (smoky shrew): 130035445
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Entry
130035445 CDS
T10594
Symbol
SCARF1
Name
(RefSeq) scavenger receptor class F member 1 isoform X1
KO
K24318
scavenger receptor class F member 1
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130035445 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfum04131
]
130035445 (SCARF1)
Membrane trafficking [BR:
sfum04131
]
Endocytosis
Phagocytosis
Scavenger receptors
130035445 (SCARF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_PEAR1L
EGF_Teneurin
EGF_2
Motif
Other DBs
NCBI-GeneID:
130035445
NCBI-ProteinID:
XP_055983134
LinkDB
All DBs
Position
Unknown
AA seq
831 aa
AA seq
DB search
MAPGLLSLLLLLAEGAPGSELDPTGQHVCRASSPSAELQCCPGWQQKDQECSIPICEGPD
ACRDEEVCVKPGLCRCKPGFFGARCDSRCPGQYWGPDCREICTCHPHGHCEPDTGVCHCQ
ADRWGERCEFPCACGPHGRCDPATGTCRCEPGWWSPTCRRPCQCNPAAARCDPASGACLC
EPGWWGRRCSFRCACHGSPCAQDSGRCACRPGWWGPECRQQCECVRGRCSAATGQCSCPA
GFRGARCELPCPPGTYGPQCRESCGHCRHKEACSADTGSCPSCEPGWNGTQCHQPCPAGT
FGESCRHQCPHCRLGEACQPDSGHCQHCDPGWLGPRCEDPCPAGSFGEACNSPCPTCVQG
ACDAVTGECICSAGYWGPSCNTSCPSGFHGNNCSVPCECPEGPCHPVSGACQLGSHSQDA
ALIVGILVPLLLLLLGIACCACCCWAARLAPKDRPVRDGAAVSRMKLQVWGALSSLGSAL
PCGSLSSHKLPWVTVSHHDPEIPFNHSFIEQPSTGWASDDSFSSDPESGEEDEGPTYCVP
PAEGMVPVVQAESPESSLAGGSFPPPEDASTPFAIPRTSSLARAKRPSVSFAEGTKFAPQ
SRQSSGELSSPLRKPKRLSRGAQPGPEGQEAEEGTALEQAEKDGEAPPGTASPQDSAAGR
RRLPLGGRMVAERVEAIEGNVQESSGTVTTIYMLAGTPRGAEGSVRSVLRRFGSFQKGQT
EPKIRSTIPKPPRRALSRNKGSPGLASTSASLSSGSAIPNEELPGALESAGARAEEVTRD
QGDGFRGSGTMLEPAPQGGPLEQEVQRLGGEEGKEEPQYENVAPVCGLPDP
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggctccagggctgctgtcgctgctgctgctgctggccgagggtgccccggggtccgag
ctggaccccacagggcagcacgtctgcagggccagtagcccctcggccgagctccagtgc
tgcccaggctggcagcagaaagatcaagaatgcagcatccccatctgcgaggggcccgac
gcctgccgggatgaggaggtgtgcgtgaagcctggcctctgtcggtgcaagcccggattc
ttcggggcccgctgcgactcccgctgcccgggccagtactggggccccgactgccgtgag
atctgcacctgccacccgcacggccactgcgagccggacaccggcgtgtgccactgccaa
gccgaccgctggggcgagcgctgcgagttcccgtgcgcctgcggcccgcacgggcgctgc
gaccccgcgacgggcacgtgccgctgcgagccgggctggtggtcgcccacgtgccgccgc
ccgtgccagtgcaacccggcggcggcgcgctgcgacccggccagcggcgcgtgcctgtgc
gagccgggctggtggggccgccgctgcagcttccgctgcgcctgccacgggtcgccgtgc
gcgcaggactcgggccgctgcgcctgccggcccggctggtggggccccgagtgccggcag
cagtgcgagtgcgtgcgcggccgctgcagcgccgccaccggccagtgcagctgccccgcc
ggcttccgcggcgcccgctgcgagctgccctgcccgcccggcacctacgggccgcagtgc
cgcgagagctgtggccactgcaggcacaaggaggcctgctctgcagacacaggcagctgt
ccgtcctgcgagccaggctggaacgggacccagtgccaccagccctgcccagctggtacc
tttggtgagagctgccggcatcagtgcccccactgccggcttggggaggcctgtcagccc
gactctggccactgccagcactgtgaccctggctggctggggcccaggtgtgaggacccc
tgcccggctggctcctttggggaggcctgtaactctccctgccccacctgtgtccaaggg
gcctgtgacgcggtgactggggaatgtatctgcagcgctggctactggggacccagctgc
aacacctcgtgtccatctggcttccatggcaacaactgctctgtaccctgcgagtgtcca
gaggggccctgccaccctgtctctggggcctgccagctgggctctcacagtcaggacgct
gccctcatcgtgggcatcctggtgcccctgctgctgctgctcctgggcattgcctgctgt
gcctgctgctgctgggcggcccgcttggcgccaaaggacaggccagtgagagatggggct
gccgtgtccaggatgaagctgcaggtgtggggagcactgagcagcctgggctcagcgctc
ccctgtgggtccctcagcagccacaagcttccctgggtgacagtctcacaccacgacccg
gagatacccttcaaccacagcttcatcgagcagccgtccacgggctgggcctctgacgac
tccttctcttcggatcccgagtctggagaggaagacgagggcccaacctactgcgttccc
cctgcagaaggaatggttcctgtggtgcaagcagagtcgccagagtccagcctggctggg
ggttccttccctcctcccgaggatgcgtccacgccttttgccatcccacgcacctccagc
ctcgcccgagccaagcggccgtctgtctcctttgctgaaggcaccaagtttgctccacag
agtcgccaaagctcaggggagctctccagccccctccgaaaacccaagaggctctcccgg
ggggcccaaccaggtcctgaagggcaggaggctgaggagggcaccgccctagagcaagca
gaaaaggacggcgaggcacctcctggcactgccagcccccaggactcagccgccggccgc
cgccgcctcccacttggtggccggatggtggcagagcgtgtggaagccatcgagggcaat
gtccaggagagctcaggcacggtaaccacaatctacatgttggcagggactccccgggga
gcagagggctcagtacggtcagtcctccgccgctttggaagtttccagaaagggcagaca
gagcccaagatcaggagcaccatccccaagcccccgcgccgggctctgagtcggaacaag
ggcagccctgggctggcctctacctctgccagtctgagctcgggctcagccatcccgaat
gaggagctccctggagccctggagtctgcaggagccagagcagaggaagtgaccagagat
cagggtgatggcttcagggggtccgggacgatgctggagccagccccccagggcggcccc
ctggaacaggaggtgcagaggctgggtggagaagaagggaaggaggagccccagtatgag
aacgtagcacctgtctgtgggctcccagacccttga
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