KEGG   Sorex fumeus (smoky shrew): 130035445
Entry
130035445         CDS       T10594                                 
Symbol
SCARF1
Name
(RefSeq) scavenger receptor class F member 1 isoform X1
  KO
K24318  scavenger receptor class F member 1
Organism
sfum  Sorex fumeus (smoky shrew)
Pathway
sfum04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:sfum00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    130035445 (SCARF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sfum04131]
    130035445 (SCARF1)
Membrane trafficking [BR:sfum04131]
 Endocytosis
  Phagocytosis
   Scavenger receptors
    130035445 (SCARF1)
SSDB
Motif
Pfam: EGF_laminin EGF_TEN EGF_PEAR1L EGF_Teneurin EGF_2
Other DBs
NCBI-GeneID: 130035445
NCBI-ProteinID: XP_055983134
LinkDB
Position
Unknown
AA seq 831 aa
MAPGLLSLLLLLAEGAPGSELDPTGQHVCRASSPSAELQCCPGWQQKDQECSIPICEGPD
ACRDEEVCVKPGLCRCKPGFFGARCDSRCPGQYWGPDCREICTCHPHGHCEPDTGVCHCQ
ADRWGERCEFPCACGPHGRCDPATGTCRCEPGWWSPTCRRPCQCNPAAARCDPASGACLC
EPGWWGRRCSFRCACHGSPCAQDSGRCACRPGWWGPECRQQCECVRGRCSAATGQCSCPA
GFRGARCELPCPPGTYGPQCRESCGHCRHKEACSADTGSCPSCEPGWNGTQCHQPCPAGT
FGESCRHQCPHCRLGEACQPDSGHCQHCDPGWLGPRCEDPCPAGSFGEACNSPCPTCVQG
ACDAVTGECICSAGYWGPSCNTSCPSGFHGNNCSVPCECPEGPCHPVSGACQLGSHSQDA
ALIVGILVPLLLLLLGIACCACCCWAARLAPKDRPVRDGAAVSRMKLQVWGALSSLGSAL
PCGSLSSHKLPWVTVSHHDPEIPFNHSFIEQPSTGWASDDSFSSDPESGEEDEGPTYCVP
PAEGMVPVVQAESPESSLAGGSFPPPEDASTPFAIPRTSSLARAKRPSVSFAEGTKFAPQ
SRQSSGELSSPLRKPKRLSRGAQPGPEGQEAEEGTALEQAEKDGEAPPGTASPQDSAAGR
RRLPLGGRMVAERVEAIEGNVQESSGTVTTIYMLAGTPRGAEGSVRSVLRRFGSFQKGQT
EPKIRSTIPKPPRRALSRNKGSPGLASTSASLSSGSAIPNEELPGALESAGARAEEVTRD
QGDGFRGSGTMLEPAPQGGPLEQEVQRLGGEEGKEEPQYENVAPVCGLPDP
NT seq 2496 nt   +upstreamnt  +downstreamnt
atggctccagggctgctgtcgctgctgctgctgctggccgagggtgccccggggtccgag
ctggaccccacagggcagcacgtctgcagggccagtagcccctcggccgagctccagtgc
tgcccaggctggcagcagaaagatcaagaatgcagcatccccatctgcgaggggcccgac
gcctgccgggatgaggaggtgtgcgtgaagcctggcctctgtcggtgcaagcccggattc
ttcggggcccgctgcgactcccgctgcccgggccagtactggggccccgactgccgtgag
atctgcacctgccacccgcacggccactgcgagccggacaccggcgtgtgccactgccaa
gccgaccgctggggcgagcgctgcgagttcccgtgcgcctgcggcccgcacgggcgctgc
gaccccgcgacgggcacgtgccgctgcgagccgggctggtggtcgcccacgtgccgccgc
ccgtgccagtgcaacccggcggcggcgcgctgcgacccggccagcggcgcgtgcctgtgc
gagccgggctggtggggccgccgctgcagcttccgctgcgcctgccacgggtcgccgtgc
gcgcaggactcgggccgctgcgcctgccggcccggctggtggggccccgagtgccggcag
cagtgcgagtgcgtgcgcggccgctgcagcgccgccaccggccagtgcagctgccccgcc
ggcttccgcggcgcccgctgcgagctgccctgcccgcccggcacctacgggccgcagtgc
cgcgagagctgtggccactgcaggcacaaggaggcctgctctgcagacacaggcagctgt
ccgtcctgcgagccaggctggaacgggacccagtgccaccagccctgcccagctggtacc
tttggtgagagctgccggcatcagtgcccccactgccggcttggggaggcctgtcagccc
gactctggccactgccagcactgtgaccctggctggctggggcccaggtgtgaggacccc
tgcccggctggctcctttggggaggcctgtaactctccctgccccacctgtgtccaaggg
gcctgtgacgcggtgactggggaatgtatctgcagcgctggctactggggacccagctgc
aacacctcgtgtccatctggcttccatggcaacaactgctctgtaccctgcgagtgtcca
gaggggccctgccaccctgtctctggggcctgccagctgggctctcacagtcaggacgct
gccctcatcgtgggcatcctggtgcccctgctgctgctgctcctgggcattgcctgctgt
gcctgctgctgctgggcggcccgcttggcgccaaaggacaggccagtgagagatggggct
gccgtgtccaggatgaagctgcaggtgtggggagcactgagcagcctgggctcagcgctc
ccctgtgggtccctcagcagccacaagcttccctgggtgacagtctcacaccacgacccg
gagatacccttcaaccacagcttcatcgagcagccgtccacgggctgggcctctgacgac
tccttctcttcggatcccgagtctggagaggaagacgagggcccaacctactgcgttccc
cctgcagaaggaatggttcctgtggtgcaagcagagtcgccagagtccagcctggctggg
ggttccttccctcctcccgaggatgcgtccacgccttttgccatcccacgcacctccagc
ctcgcccgagccaagcggccgtctgtctcctttgctgaaggcaccaagtttgctccacag
agtcgccaaagctcaggggagctctccagccccctccgaaaacccaagaggctctcccgg
ggggcccaaccaggtcctgaagggcaggaggctgaggagggcaccgccctagagcaagca
gaaaaggacggcgaggcacctcctggcactgccagcccccaggactcagccgccggccgc
cgccgcctcccacttggtggccggatggtggcagagcgtgtggaagccatcgagggcaat
gtccaggagagctcaggcacggtaaccacaatctacatgttggcagggactccccgggga
gcagagggctcagtacggtcagtcctccgccgctttggaagtttccagaaagggcagaca
gagcccaagatcaggagcaccatccccaagcccccgcgccgggctctgagtcggaacaag
ggcagccctgggctggcctctacctctgccagtctgagctcgggctcagccatcccgaat
gaggagctccctggagccctggagtctgcaggagccagagcagaggaagtgaccagagat
cagggtgatggcttcagggggtccgggacgatgctggagccagccccccagggcggcccc
ctggaacaggaggtgcagaggctgggtggagaagaagggaaggaggagccccagtatgag
aacgtagcacctgtctgtgggctcccagacccttga

DBGET integrated database retrieval system