Sorex fumeus (smoky shrew): 130035619
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Entry
130035619 CDS
T10594
Symbol
ABCA9
Name
(RefSeq) ATP-binding cassette sub-family A member 9
KO
K05651
ATP-binding cassette, subfamily A (ABC1), member 9
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
130035619 (ABCA9)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfum02000
]
130035619 (ABCA9)
Transporters [BR:
sfum02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
130035619 (ABCA9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
AAA_22
AAA_30
AAA_16
AAA_23
AAA_25
cobW
ABC2_membrane
Motif
Other DBs
NCBI-GeneID:
130035619
NCBI-ProteinID:
XP_055983410
LinkDB
All DBs
Position
Unknown
AA seq
1625 aa
AA seq
DB search
MCKRHIHVGQQTWALLCKNFLKKWRMKRETFLEWFFSFLLVLFAYLFFSNLHQVNDFPQL
PAKDLGRVDNFNDSNYVIAFTPESQTTQEIMNKVASAPFMKGRTIMGWPDEKSMDELDLN
YSTDAVRVIFNDTFSYHLKFSWGGRIPEVKEHRDHSAHCQAMDEKLVCEASMFWVKGFVA
FQAAINAAIIEITTNHSVMEELMSVTGINMKMSPFVAQAGLETDVFIFLCIISFSAFIYY
VSVNVTQERQYMKSLMTMMGLQESAFWFSWGLMYAGFICIMATLMALVVKSAHVVVLTGF
VVVFILFLLYGLSLITLAFLMSVLVKKPFLTGLVVFLLTVFWGTLGFTALYRHLPAFWEW
TLCLLSPFAFTSGMAQLIHLDYDVNSNEHLDPSSNPYLIIATLFMLIFDSLLYLVLALYF
DKILPTEYGRQQSPWFFLKSSFWFQHQRVDHMVLENETDSDSASNDSFEPVSPEFHGKEA
IRIKNLKKEYEKGKHEKVEALKGLILDIYEGQITALLGHSGAGKTTLLNTLSGLSVPTSG
SVTIYNNKLSEKSDLAAVSKLTGVCPQSNVQFGFLTVRENLRLFAKIKGIQPHEVEQEVQ
QVLRDLEMENIQDILAQNLSGGQKRKLTFGIAILGDPQVLLLDEPTAGSDPLSRHRVWNL
LKERKANRVILFSTQFMDEADILADRKVFISNGKLKCAGSSLFLKKKWGIGYHLSLHLNE
MCDPDNITSLVKQHIPEAKLTEQSEEKLVYILPLERTNKFPDLYRDLDRCSNQGIENYGV
SMTTLNEVFLKLEGKSAIDESDIGNWRQLQSDRTKDTGSLVELEQVLSSFNDSKKAITGM
SLWKQQLCAIAKVRFLKLKNEKKTLLTMLLLFGISFCPQLLEHLFYEIYRKSYSWELSPK
MYFLALGQPPQAPLTHLLVINKTESNIDNFIHSLRRQNIALEVDAFGTRSGPNESSYNGA
ITVSGGEKGLRFSIACNTKRLNCFPVLMDVISNGILGIFNSSEHIQTDRSTYFEEHMSYE
NGYLSNVFFWIPVAACFTPYIAMSSISDYKSKAHSQLWISGLYPSAYWFGQALIDIPLYF
SILLLMQIMDYVFSPDEIIFIIQNLLIQILCSIGYVSSLIFLTYVISFIFRNGRKNSGMW
SFFFLIVTIFSIVAIDINEFRFIGLVLCTILIPPFTLIGSLFIYSEISPDSLDYLGDSED
EIVFLALLIPYLHFFIFLFVLRCLEMNFRKKSMRKDPVFRISPRGNDVFPNPDELEGEDE
DVQTERARTANAVIVPDLDEKPVIIASCLRKEYAGKKKTCLAKRKKKVAIRNVSFCVKKG
EVVGLLGHNGAGKSTTIKMITGATKPTAGQVILKGSSGETPLEFLGYCPQENVLWPNLTV
KEHLEVFAAVKGLSKGDAAVTIPRLVDALKLQDQLKLPVKSLSEGIKRKLCFTLSILGSP
SVVLLDEPSTGMDPEGQLQMWQAIRATFRNTNRGALLTTQYMAEAEAVCDRVAVMVSGRL
RCIGSIQHLKSKFGKDYLLEMKVRTPEQGGTLHAEILRLFPQAARQERYSSLVVYKIPIE
DVQPLSQAFFKLEIVKQSFNLEEYSLSQSTLEQVFLELSKEQELDDFDEELHPSVRWKLL
PQEEL
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaaaaggcacatacacgtgggccagcaaacatgggcccttctctgcaagaacttt
cttaaaaaatggaggatgaaaagagagacctttctggaatggtttttctcatttcttcta
gtactgtttgcatacctatttttctcgaatttacatcaagttaatgactttcctcaattg
cctgcaaaagatctgggtcgtgtagataatttcaatgattcgaattatgtcattgcattt
acaccggaatcccaaacaacccaagagataatgaacaaagtggcttcagctccattcatg
aaaggaagaacaatcatgggatggcctgatgaaaaaagcatggatgaattggacttgaac
tattctacagatgcagtaagagttatttttaacgatactttttcttaccacttgaagttt
tcctggggaggaagaattcctgaggtgaaagaacacagagaccattcagctcattgtcaa
gcaatggatgaaaaactcgtgtgtgaagcttcaatgttctgggtgaaaggctttgtagct
tttcaggctgccattaatgctgctattatagaaatcacaaccaatcactcggtgatggaa
gaattgatgtcagtcactggtataaatatgaagatgtcaccatttgttgcccaagcaggg
ctggagactgatgttttcattttcctctgcattatctccttctctgctttcatctactat
gtatcagttaatgttacacaagaaaggcaatacatgaagtcgctaatgacaatgatggga
cttcaagaatcagcattctggttctcctgggggttgatgtatgctggcttcatctgtatc
atggccactttgatggcgcttgttgtaaaatctgcccacgtggttgttctgactggcttc
gtggtagtcttcatcctttttctcctctatgggctgtctttgataactttagctttcctg
atgagtgtgttggtaaagaagcctttcctcacggggctggtggtttttctcctaactgtc
ttttggggaactctgggattcacagcgttatacagacacctccctgctttttgggaatgg
accttatgtcttctcagcccctttgctttcacttctggaatggcacagctgatacacttg
gactatgatgtgaattctaatgagcatttggatccttctagcaacccatatttaataata
gctactctcttcatgttgatttttgattctcttctctacttggtcctggcattatacttt
gacaaaattttgcccactgaatatggacggcaacagtccccctggttttttctgaagtct
tcattttggtttcagcaccaaagagttgatcacatggtccttgagaatgaaacagattca
gattccgcatctaatgactcttttgaaccagtgtctccagaattccatggaaaagaggcc
atcagaataaaaaatcttaagaaagaatatgaaaagggaaagcatgaaaaagtagaagct
ttgaaaggtctgatattggacatatatgaaggccagatcacagccctgcttggtcatagt
ggggctgggaaaacgaccctgttgaacacgctcagtggactctcagttccaacctcaggt
tcggtcacgatctataataacaagctttccgaaaagtctgacttagcagctgtcagcaag
ctcactggtgtttgtccacaatccaatgtgcaattcggcttcctcacagtgagggaaaat
ctcaggctgtttgctaaaatcaaagggattcaaccccatgaagtggagcaagaggtacag
caagtgttacgggacttagagatggaaaatatccaagacattcttgctcaaaatttaagt
ggtggacaaaaaagaaaattaacatttgggattgccattttaggagatcctcaggtttta
ctattggatgaaccaactgctggatccgatccactttcaaggcacagagtatggaacctc
ttaaaagagagaaaggcaaacagagtcattctcttcagtacccagttcatggatgaggct
gacatcctggctgacaggaaggtatttatatctaatggaaagctgaagtgtgcaggttct
tctctattcctgaagaagaaatggggcattggctaccacttaagtttgcacctgaatgaa
atgtgtgatccagacaacataacatcacttgtaaagcagcatatcccagaggccaaatta
acagaacaaagtgaagaaaagcttgtctatattttgcctttggaaaggacaaacaaattt
ccagacctttacagggatcttgatagatgttctaaccagggcattgagaattatggagtt
tccatgacaactttaaatgaagtgttcttgaaattagaaggaaagtcagctattgatgaa
tcagatattggaaattggagacagttacagagtgacaggacaaaagacacaggaagtctt
gttgagctggaacaagttctgtcttcctttaatgacagtaagaaagcaatcaccggcatg
tctctctggaagcaacagctgtgtgcaatagcaaaagttcgcttcctaaagttaaaaaat
gaaaaaaaaactctattgaccatgttattgttgtttggcattagcttttgtcctcaactt
ttggaacatctattctatgagatttatcggaaaagttattcttgggaactgtctcctaaa
atgtacttccttgcactgggacaaccacctcaagctcctctgacccacttactagtcatt
aataaaacagagtcaaacattgacaactttatacattcactaagaagacagaacatagct
ttggaagtggatgcctttggaactagaagcggtccaaatgagtcttcatacaatggtgcc
atcactgtgtctggtggtgagaagggtctcagattttcgatagcatgtaatactaaaaga
ctgaattgttttcctgttctcatggatgtcattagcaatggtattcttggaatttttaat
tcttcagaacatatacagacagacagaagcacatattttgaagagcatatgtcttatgaa
aatgggtacctgagtaatgtcttcttctggatcccagtagcagcctgttttactccctac
atcgcaatgagcagcatcagtgactacaaaagcaaagctcactcccagctatggatttca
ggtctctacccttcagcttattggtttgggcaagcgctgatagatattccattatacttc
tccatccttcttctaatgcaaatcatggattatgtctttagcccagatgagattatattc
ataatccaaaacctgttaattcagatcctgtgcagtattggatacgtctcatctcttatt
ttcttgacatatgtgatttcattcatttttcgtaatggaagaaaaaatagtggcatgtgg
tcatttttcttcttaattgtcaccatcttctcaatagttgctattgatataaatgaattc
agatttataggactagttctctgcaccatattgataccaccctttacgttgattggctct
ctattcatttattctgagatttctcctgactctctggattatttaggagattcagaagat
gaaattgtattcctcgcattgctaattccttatctccattttttcattttcctttttgtt
ctacgatgcctggaaatgaactttaggaagaaatcaatgaggaaggaccctgtgttcaga
atttctccaagaggcaatgatgtttttccaaacccagatgaactcgaaggagaagatgaa
gatgttcaaacagaaagggcaagaacagcaaatgctgtgatcgtcccagatctggatgag
aaaccagtcatcattgccagctgtctacggaaggaatacgcaggcaaaaagaaaacctgc
ttggccaagaggaagaaaaaagtggccatcagaaatgtctctttctgtgtgaaaaaaggt
gaagtggtcggtcttctaggacacaatggagctggtaaaagcacaactattaagatgata
acaggagccacaaaaccaactgcagggcaggtgattttgaaagggagtagtggagagacc
cccctggagttcctggggtactgccctcaggagaatgtgctgtggcctaatttgactgtg
aaggagcacctggaggtatttgctgcagtgaagggtctgagcaaaggggatgcagccgtc
accatcccaaggttggtggatgcactcaagctgcaggaccagctgaagcttcccgtgaag
tccctgtcagagggaatcaagaggaagctgtgcttcacgctgagcatcttgggaagcccg
tccgtggtgcttctggatgagccatccacgggcatggaccccgaggggcagctgcaaatg
tggcaagccatcagagccaccttcagaaacacgaatcggggtgccctcctgactacccag
tacatggctgaggctgaagccgtgtgtgaccgagtggccgtgatggtgtcaggaagactg
agatgtatcggttccatccaacatctgaagagcaaatttggcaaagattacctattggag
atgaaggtgagaactcctgaacaaggggggactctccatgcagaaattctgagacttttc
ccccaagctgctcggcaggaaaggtactcctcactggtggtctacaagatacctattgaa
gatgtacaacctttatcgcaggctttcttcaaactagagatagtgaaacagagcttcaac
ctggaggagtacagcctctcacagtccactctggagcaggtattcctggagctttccaag
gagcaggaactggatgactttgatgaggaacttcacccctccgtgagatggaaactgctt
ccccaggaagagctttga
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integrated database retrieval system
