Sorex fumeus (smoky shrew): 130035637
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Entry
130035637 CDS
T10594
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03082
ATP-dependent chromatin remodeling
sfum04714
Thermogenesis
sfum05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130035637 (SMARCD2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
130035637 (SMARCD2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
130035637 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfum03021
]
130035637 (SMARCD2)
03036 Chromosome and associated proteins [BR:
sfum03036
]
130035637 (SMARCD2)
Transcription machinery [BR:
sfum03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130035637 (SMARCD2)
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
130035637 (SMARCD2)
PBAF complex
130035637 (SMARCD2)
GBAF(ncBAF) complex
130035637 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
130035637
NCBI-ProteinID:
XP_055983432
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MSGRGAGGFPLPPLSPGGGAVAAALGAPPPPAGPGMMPVPALRGPGPAGGVVGPGAAAFR
PMGPAGPAAQYQRPGMSPGSRMPMAGLQVGLPAGAPFGAAAPLRPGMPPTMMDPFRKRLL
VPQAQPPMPAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEI
QEAIKKPLTQKRKLRIYISNTFSPSKVEGDSTGTAGTPGGTPAGDKVASWELRVEGKLLD
DPSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTL
LLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFR
QIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQM
SNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLK
IITDVIGNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccgtggcgcgggcgggttcccgctgcccccgctcagccccggcggcggcgcc
gtggccgcggccctaggggcgccgcctccgcccgcgggccccggcatgatgcccgtgccg
gcgctgagagggccggggccggccggcggcgtggtgggccccggggccgccgccttccgc
cccatgggccccgcggggcccgcggcgcagtatcagcggcctggcatgtcacctgggagc
cgcatgcctatggctggcctgcaggtgggactccctgctggcgccccgtttggtgcagct
gctccacttcgacctggcatgccacccaccatgatggacccattccgaaaacgcctgctc
gtgccccaggcccagcccccgatgcccgcccagcgccgggggctgaaaaggaggaagatg
gcagacaaggttctacctcagcgcattcgggaacttgtcccagagtctcaggcatacatg
gatctcttggcttttgagaggaagctggaccagaccattgctcgaaagcggatggagatc
caggaggccatcaaaaagcctctgacgcaaaaacgaaaactgcggatctatatttccaac
acgttcagtcccagcaaggtggaaggtgacagcacaggaactgcagggacccccggcgga
accccagcaggggacaaggtggcttcctgggagctccgagtggaggggaaactgctggat
gatcctagcaaacagaagaggaagttttcttccttctttaagagcctcgtcattgagctg
gacaaggaactctacgggcctgacaatcacctggtggagtggcaccggatgcccaccacc
caggagacggatggcttccaggtgaagagaccgggagacctcaatgtgaagtgcaccctc
ctgctcatgctggatcaccagcctccgcagtacaaactggacccccgactggcaaggctg
ctgggggtgcacacccagacgagggctgccatcatgcaggccctgtggctgtacatcaaa
cacaaccagctgcaggacggccacgagcgcgagtacatcaactgcaaccgttacttccgc
cagatcttcagttgtggccgtcttcgtttctctgagattcccatgaagctggccggtttg
ctgcagcatccagaccccattgtcatcaaccatgtcattagtgtggaccccaatgaccag
aagaagacagcctgttatgacatcgatgtggaggtagacgaccccctcaaggcccagatg
agcaatttcctggcctctaccaccaatcagcaagagattgcctccctggatgtcaagatc
catgagaccatcgagtccatcaaccagctgaagacccagagggatttcatgctcagcttc
agcactgacccccaggactttatccaggaatggctccgttcccagcgccgagacctcaag
atcatcactgatgtcatcgggaatcccgaggaggagaggcgagccgctttctatcaccag
ccctgggcccaggaagccgtggggagacacatctttgctaaggtgcagcagcgaaggcag
gaactggaacaggtgctgggaattcgcctgacctaa
DBGET
integrated database retrieval system
