Sorex fumeus (smoky shrew): 130035638
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Entry
130035638 CDS
T10594
Symbol
PSMC5
Name
(RefSeq) 26S proteasome regulatory subunit 8
KO
K03066
26S proteasome regulatory subunit T6
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03050
Proteasome
sfum05010
Alzheimer disease
sfum05012
Parkinson disease
sfum05014
Amyotrophic lateral sclerosis
sfum05016
Huntington disease
sfum05017
Spinocerebellar ataxia
sfum05020
Prion disease
sfum05022
Pathways of neurodegeneration - multiple diseases
sfum05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
130035638 (PSMC5)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
130035638 (PSMC5)
09164 Neurodegenerative disease
05010 Alzheimer disease
130035638 (PSMC5)
05012 Parkinson disease
130035638 (PSMC5)
05014 Amyotrophic lateral sclerosis
130035638 (PSMC5)
05016 Huntington disease
130035638 (PSMC5)
05017 Spinocerebellar ataxia
130035638 (PSMC5)
05020 Prion disease
130035638 (PSMC5)
05022 Pathways of neurodegeneration - multiple diseases
130035638 (PSMC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sfum03051
]
130035638 (PSMC5)
Proteasome [BR:
sfum03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
130035638 (PSMC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_2
AAA_5
AAA_16
AAA_22
AAA_lid_PRS2_C
nSTAND3
PRS7_OB
RuvB_N
TIP49
AAA_18
AAA_28
Mg_chelatase
AAA_3
AAA_33
NPHP3_N
AAA_14
Parvo_NS1
ATPase
AAA_17
PhoH
FapA
IstB_IS21
AAA_24
AAA_7
AAA_25
DUF815
DUF7006
Sigma54_activat
bpMoxR
DUF5906
RNA_helicase
ABC_tran
Zeta_toxin
AAA_11
AAA_19
TsaE
HR1
Prominin
Motif
Other DBs
NCBI-GeneID:
130035638
NCBI-ProteinID:
XP_055983434
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MALDGPEQMELEEGKAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLR
EELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDS
YTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGI
AQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMARE
HAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDI
LDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVK
GVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgacggaccagagcagatggagctggaagaggggaaggcaggcagcggtctc
cgccagtactacctgtccaagatcgaagagctccagctgattgtgaatgataagagccag
aaccttcggaggctgcaggcacagagaaatgagcttaatgcaaaagttcgcctgttgcgg
gaagagctgcagttgctgcaggaacaaggttcctacgtgggcgaagtcgtccgggccatg
gataagaagaaagtgctagtgaaggtacatcctgagggcaagttcgtggtggatgtggac
aagaacatcgatattaacgatgtgacacccaactgccgggtggccctaagaaacgacagc
tacactctacacaagatcctgccaaacaaggtagacccactggtgtctttgatgatggtg
gagaaggtgccagactccacctatgagatgatcggggggctggacaagcagataaaggag
attaaggaggtgatcgagctgcctgtgaaacatcctgagctcttcgaggcgctgggcatc
gcacagcccaagggagtgctgctctatggaccccctggcaccgggaaaacgctattggcc
cgggccgtggctcatcacacagactgtacctttattcgtgtgtctggctccgagttagtg
cagaagttcatcggggaaggagcgagaatggtgcgggagctgttcgtcatggcccgggaa
cacgcgccgtccatcatctttatggacgaaatcgactccattggttcctctcggctggag
gggggctccggaggggacagtgaagtacagcgcaccatgctggagctcctcaaccagctg
gatggctttgaggccaccaagaacatcaaggtgatcatggccactaataggattgatatc
ctggactctgcgctgctccgcccaggccgcatcgacagaaagattgagttcccacccccc
aatgaggaggctcggctggacattctgaaaattcattctcggaaaatgaacctgacccgc
ggcattaacctgaggaaaattgcagagcttatgccaggagcatcgggggctgaagtgaag
ggcgtgtgcacagaagctggcatgtatgcgctgcgggaacggcgagtgcacgtcacccag
gaggacttcgagatggccgtggccaaggtcatgcagaaggatagtgagaaaaacatgtcc
atcaagaagctatggaagtga
DBGET
integrated database retrieval system
