Sorex fumeus (smoky shrew): 130035768
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Entry
130035768 CDS
T10594
Symbol
VARS2
Name
(RefSeq) valine--tRNA ligase, mitochondrial
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
130035768 (VARS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfum01007
]
130035768 (VARS2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfum03016
]
130035768 (VARS2)
Enzymes [BR:
sfum01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
130035768 (VARS2)
Amino acid related enzymes [BR:
sfum01007
]
Aminoacyl-tRNA synthetase
Class I (U)
130035768 (VARS2)
Transfer RNA biogenesis [BR:
sfum03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
130035768 (VARS2)
Prokaryotic type
130035768 (VARS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
tRNA-synt_1f
Motif
Other DBs
NCBI-GeneID:
130035768
NCBI-ProteinID:
XP_055983648
LinkDB
All DBs
Position
Unknown
AA seq
1062 aa
AA seq
DB search
MPHLPLAPFRPPLRVLRPSRAFPRSQPHSTQSEPYGSPISRKNREARQKRLREKQAALEA
GLVGRSKSPAESSKAWTPKEVVLYEIPTEYGEKKDVTQPLPPAYSPRYVEAAWYPWWVRE
GYFKPEYQARLPQATKETFSMCIPPPNVTGSLHIGHALTVAIQDAIVRWHRMRGDQVLWV
PGSDHAGIATQAVVEKQLWKERGVRRHELSREDFLREVWKWKEEKGGEICEQLRALGASL
DWDRECFTMDAGSSAAVTEAFVRLYKAGLLYRSRQIVNWSCALRSAISDIEVENRSLPGR
TELRLPGCPSPVTFGLLFSVAFPVDGLPDAEVVVATTRPETLPGDVAVAVHPADDRYTHL
HGRQLHHPLTGQLLPLITDSAVQPHLGTGAVKVTPAHSPVDAELGARHGLSPLSVISEDG
TMTALCGDWLQGLHRFVAREKIMSALRERGLYRGLQNHPMVLPICSRSGDVVEYLLKSQW
FVRCQEMGARAAKAVESGLLELSPPFHQKNWHHWFSHIGDWCVSRQLWWGHQIPAYLVVQ
EPVEGDREDCWVVGRTEAEAREAAAELTGRPAAELTLERDPDVLDTWFSSALFPFSALGW
PRETQDLKHFYPLSLLETGSDLLLFWVGRMVMLGTQLTGQLPFRKVLLHSMVRDKQGRKM
SKSLGNVLDPRDIISGVELQVLQEKLKDGNLDPAELTFAATAQRKEFPHGIPECGTDALR
FALCSHGALGGDLNLSVSEVLSTRHFCNKIWNALRFILNALGENFVPQPVEELAPTCPMD
AWILSRLARTAVECERGFRARELSHVTHSLHHFWLHSLCDVYLEAVKPVLRRSPPPAEPP
QVLFSCADVALRLLAPLMPFLAEELWQRLPPKPGGLPAPSICVAPYPSASSLEHLHQPEL
EGNFSQVQEAIQALRALRATYQLAKVRPQVLLWSSEPAERRLFETFLEPMATLGQCGAVG
LLAPGTAPPSSWAQTSLSATAQAYMELQGLVDPQTHLPLLAARRNKLQKQLDGLLARSPA
GEEAETLRQQRLSSLQLELVKLDQAALHLEKLLAACPRPREP
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgcctcacttgccgctggccccttttcgaccaccactccgggttctgaggccctcacgg
gccttccccaggtcgcagccccattccacgcagtcagaaccctatgggtcccccatctcc
aggaagaaccgggaagccagacagaagcgcctgcgagagaaacaggcggctctggaagct
gggctggtggggagaagtaagtcccctgcagaatccagtaaggcctggactcccaaggag
gtagtgttgtatgaaatccctacagaatacggcgaaaagaaagatgtcactcagcctctg
cctcctgcgtacagcccccgctatgttgaggcggcctggtacccttggtgggtgcgagag
ggctacttcaaacccgagtatcaggccagattgccccaggccaccaaggagaccttttct
atgtgtatcccaccgcctaacgttactggctccttgcacattggacatgcactcaccgtg
gccatacaggatgccatcgtgcgctggcatcgcatgcgtggggatcaggtcctgtgggtc
cctggctcagatcatgcaggaattgctacccaagctgtggttgagaaacagctgtggaaa
gagcgaggagtgaggagacatgagctgagtcgggaagacttccttcgggaggtgtggaaa
tggaaggaagagaaaggtggagagatctgtgagcagctccgtgcgctgggggcctccttg
gactgggaccgggagtgcttcactatggatgctggctcctcagcggccgtgactgaagct
tttgtgcgactctacaaggcagggttgttgtaccggagccggcagattgtcaactggtcc
tgtgctttacgatcagccatttcggatattgaggtggagaaccggtccctgcctggccgc
accgagctccggctacctggctgccccagccccgtgactttcggcctcctcttttctgtt
gccttccccgtggatggactgcctgatgctgaggttgtggtagcaaccaccaggccagag
accttgcctggagacgtggctgtggccgtccatcctgctgatgaccgatacacgcatctg
cacgggcgacagcttcatcaccccttgacaggacagcttctacccctcatcacagactct
gctgttcagccacacctgggcacaggggcagtgaaggtgactccagctcacagcccagtt
gacgctgagttgggggcccggcatggcttgagccccctgagtgtcatctctgaggatggg
accatgaccgccctctgcggggactggctgcagggccttcaccgatttgtggcccgagag
aagattatgtctgcactcagggagcggggcctgtaccggggtctccagaaccaccccatg
gtgctgcctatctgcagccgttccggggatgtggtggagtacctcctgaagagccaatgg
tttgtccgctgccaggaaatgggggcgcgcgctgccaaggctgtggagtcggggctcctg
gaactcagcccgcccttccaccagaagaactggcatcactggttctcccacattggggat
tggtgtgtctcccggcagttgtggtggggtcatcagattccagcctacttggtggttcag
gagcccgtggagggtgacagggaggactgttgggtggttggaaggaccgaggctgaggcc
agagaagcagctgcagaactgacagggcggccggcagcggagctaaccctggagagagac
cctgatgtcttggacacctggttctcctcggctctttttcccttttctgccttgggctgg
ccccgagagacgcaagacctgaagcatttctacccgctgtcccttctggagacgggcagt
gacctcctgctgttctgggtgggccgcatggtcatgctgggaacgcagctcactggacaa
ctccccttcaggaaggtgcttcttcactccatggttcgggataagcagggccggaagatg
agcaagtccttggggaacgtactggacccacgggacatcatcagcggggtggagctgcag
gtgctgcaggagaagctgaaagatgggaacttggaccctgcggagctgacatttgcagcc
acagcacagagaaaggaattccctcatgggatccctgagtgcgggacagatgccctgaga
ttcgccctgtgctcccatggagccctggggggcgacttgaacctgtctgtttctgaggtc
ctcagcactcgtcatttctgcaacaagatctggaatgccctgcgctttatcctcaatgcc
ctaggagagaacttcgtgccccagcccgtggaggagctggccccaacatgccccatggac
gcctggatcctgagccgcctcgcacgcactgccgtggagtgtgagcgaggcttccgcgcc
cgggagctgtcgcatgtcacccacagcctgcaccacttctggctgcacagtctctgtgat
gtctacttggaagctgtgaagccggtgctgcggcgttctccgccccctgcagagcctccc
caggtcctgttctcctgtgccgatgttgctctgcgccttctggctccactgatgcccttc
ctggctgaggagctctggcagaggctgccccccaagcctggtgggctccctgcccctagc
atctgtgttgccccctaccctagtgcctctagcttggagcacctgcaccagcctgagctg
gaaggaaacttctcccaagtccaggaggccattcaggcactgagggctctgcgagccacc
tatcagctagccaaagtccggccccaagtgctgctgtggagctccgagcctgccgagcgg
cgcctctttgagaccttcctagagcccatggccaccctgggccagtgtggggctgtgggg
ctcttagccccgggcacagcacccccctccagctgggctcagacctcactcagtgccacc
gctcaggcctacatggagctgcagggcctggtggacccccagacccatctccctctcctg
gctgcccggagaaacaagttgcagaagcagcttgatggactcttagcccggagcccagca
ggggaagaggcggagaccctgaggcagcagaggctctcttccctgcagctggagctggtg
aaactggaccaggcggccctgcacctggaaaagctgctggctgcgtgccccagaccccgc
gagccctga
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