Sorex fumeus (smoky shrew): 130035808
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Entry
130035808 CDS
T10594
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04080
Neuroactive ligand-receptor interaction
sfum04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130035808 (TRPV1)
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
130035808 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfum04040
]
130035808 (TRPV1)
Ion channels [BR:
sfum04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
130035808 (TRPV1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
YVC1_C
Ion_trans
Ank_3
Ank_5
Ank_4
Motif
Other DBs
NCBI-GeneID:
130035808
NCBI-ProteinID:
XP_055983699
LinkDB
All DBs
Position
Unknown
AA seq
835 aa
AA seq
DB search
MKKWESSDFEESEDQPQEDSCPDSMDGDPNSRPATNNPHIFPKNQSQRFGKCDWEGASAM
DCSPEEGKLASCPTIRISPAIIIQRSTDGPTYSRLLPQNSIHAGTKNFQLYDRRKIFEAV
AQNNCEELENLLLFLQRSKKHLMDSEFKDPETGKTCLLKAMLNLHDGQNDTIPLLLEIAR
QTNSLKEFVNASYTDSYYRGQTALHIAIERRNMALVTLLVENGADVQAAANGDFFKQTKG
RPGFYFGELPLSLAACTNQLGIVKFLLQNSWQRADISAKDSVGNTVLHALVEVADNTADN
TKFVTSMYNEILILGAKLHPTLKLEELTNKKGLTPLSLAARSGKIGVLAYILQREIREPE
CRHLSRKFTEWAYGPVHSSLYDLSCIDTCENNSVLEVIAYSSSDTPNRHDMLLVEPLNRL
LQDKWDRFVKRIFYFNFFVYCLYMIIFTTAAYYRPVEGLPPFELKHTVEDYFRVVGEILS
VLGGVYFFFRGIQYFLQRRPSLKSLFVDSYSEILFFVQSLFMLGTVVLYFSRCKEYVASM
VFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMILRDLCRFMFVYLVFLFGFSTAVVTLIED
GKNTSVVSDFPLPRRGCRPPDSNYNSLYFTCLELFKFTIGMGDLEFTENYNFKAVFIILL
LAYVILTYILLLNMLIALMGETVNKIAQESKNIWKLQRAITILDTEKSFLKSMRRAFRSG
KLLQVGYTPDGKDDYRWCFRVDEVNWTTWNNNVGIINEDPGNCEGVKRTLSFSLRSGRVS
GRNWKNFALVPLLRDTSARERQPAQPEEVQMRHFAGSLKPEDAELFKDPATLGEK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatgggagagttcagactttgaagaatctgaggaccagccccaagaggactcc
tgcccagactctatggatggagaccccaactccaggccagctacaaacaatccccacatc
ttccccaagaaccagagccagcgatttgggaaatgtgactgggagggggcttctgccatg
gactgttcacctgaagaaggcaagttggcatcctgcccgaccataagaatcagtcctgct
atcatcatccagaggtctacagatggccccacctactccaggctgctgccccagaattcg
atccacgcggggaccaagaacttccagctctatgatcgcaggaagatctttgaagcggtg
gcccagaataactgtgaggagctggagaacctgctgctcttcctgcagaggagcaagaag
cacctcatggacagcgagttcaaagacccggagacggggaagacctgtctgctgaaagcc
atgctaaacctgcacgatgggcagaacgacaccatccccctgctcctggagatcgcccgg
cagaccaacagtctgaaggagtttgtcaacgccagctacacggatagctactacaggggc
cagacggcgctgcacattgccatcgaacggcggaacatggctctggtgacactcctggtg
gagaacggggcagatgtccaggctgcagccaacggtgacttcttcaagcaaaccaaaggg
cgacctggcttctattttggtgagctgcctctctccctggctgcatgcaccaaccagctg
ggcatcgtgaagttcctgctgcagaactcctggcagcgggcagacatcagtgccaaggac
tctgtgggcaacacagtgctgcacgcgctggtggaggtggctgacaacacggccgacaac
accaagtttgtgacgagcatgtacaacgagatcttgatcctgggggccaagctccaccct
acgctgaagctggaggagctcaccaacaagaaggggctgacgccgctgtctctggctgcc
aggagcgggaagattggggttctggcttacattctgcagagggagatccgggagccagag
tgtaggcacctgtccaggaagtttaccgagtgggcctacgggcctgtccattcctcgctc
tacgacctgtcctgtattgacacttgtgagaacaactcggtgttggaggtgattgcctac
agcagcagcgacacacctaatcgccatgacatgctcttggtggagccactgaaccgactc
ctacaggacaaatgggaccgatttgtcaagcgcatcttctacttcaacttttttgtctac
tgcttgtacatgatcatcttcaccacagcagcctactacaggcctgtggaaggcttgcct
ccctttgaactgaaacacaccgttgaagactatttccgagtcgttggagagattctttca
gtgttggggggagtctacttttttttccgagggattcagtattttctgcagaggcggccg
tcactgaaatccttgtttgtggacagctacagtgagattctattctttgtgcagtcactg
tttatgctgggaactgtggtactgtacttcagccgctgcaaggagtatgtggcctccatg
gtgttctccctggccatgggctggaccaacatgctctactacacccgtggcttccagcag
atgggcatctatgctgtcatgattgagaagatgatcctgagagacctgtgtcgcttcatg
tttgtctacctcgtattcttgttcgggttttccacagctgtggtgacgctgattgaagat
gggaagaatacctcagtggtgtcagacttcccgttgcccaggcgaggatgccggcccccc
gacagcaactacaacagcctgtacttcacatgcctggagcttttcaagttcaccattggc
atgggggacctggagttcaccgagaactataacttcaaggctgttttcatcatcttgctg
ctggcttacgtgatcctcacttacattctcctgctcaacatgctcattgccctcatgggc
gaaactgtcaacaagattgcgcaggaaagcaagaacatatggaagctgcagagagccatc
accatcctggacacggagaagagcttccttaagagcatgaggcgggccttccgctcaggc
aagctgttgcaggtgggatacacacctgacggcaaggatgactaccggtggtgcttcagg
gtggacgaggtgaactggactacctggaacaacaatgtgggcatcatcaatgaagaccca
ggcaactgtgagggcgtcaagcgcaccctgagcttctccctacgctcaggcagagtttca
gggagaaactggaagaactttgccctcgttcctcttttaagagatacgagtgcccgagaa
agacaacctgctcagccggaggaagttcagatgaggcactttgcagggtccctcaagcca
gaagatgctgagctcttcaaggaccctgctaccttaggggagaagtga
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