Sorex fumeus (smoky shrew): 130035929
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Entry
130035929 CDS
T10594
Symbol
TSR1
Name
(RefSeq) pre-rRNA-processing protein TSR1 homolog
KO
K14799
pre-rRNA-processing protein TSR1
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfum03009
]
130035929 (TSR1)
Ribosome biogenesis [BR:
sfum03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
130035929 (TSR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
Tsr1_G-like
DUF6760
Motif
Other DBs
NCBI-GeneID:
130035929
NCBI-ProteinID:
XP_055983835
LinkDB
All DBs
Position
Unknown
AA seq
803 aa
AA seq
DB search
MAAHRSGPLKQQNKPHKSGRHRSRASAQQDNKGRLAPKTLSKKVRKELSRVDQRHRASQL
RKQKKEAVLAEKRQLGSKDGPPHQVLVIPLHNRISLPEAFRLLQDSDTGTVHLNAWGSTN
FMLLCPRFKHRWFFTSARPGDLHTVLDLAKVADTILFLLDPLEGWDSTGDYCLSCLFAQG
LPTYTLAIQGVSGLPPKKQIDAKKKLSKAVEKRFPDDKLLLLDTQQEAGILLRHLANQKQ
RHLAFRDRRAYLFAHAVDFVPGEENNLMGTLKISGYVRGQSLNVNSLLHIIGHGDFQMKQ
IDAPVDPFPLNPRMTKSQKNPAVVMEICATDTVADMEEDIKILMKADPNRQESLQTEVIP
DPMEGEQTWPTEEELSEANDRLKERSKVVKKVPKGTSSYQAEWILDEDGESSGEGDEDDD
IEHEHFMEEESQDESSEEGEEEQCETMTIGESVRDDLYDEKVDEEAEEEMMEKYKQERLE
EMFPDEVDTPRDVAARIRFQKYRGLKSFRTSPWDPKENLPRDYARIFQFQNFTNTRKRIF
KDIEEKEVEGAEVGWYVTLHVSEVPVSVLECFKQGNPLIAFSLLPHEQKMSVLNMVVSRH
PGNTEPVKAKEELIFHCGFRRFRASPLFSQHTAADKHKFQRFLTADTALVVTVYAPITFP
PASVLLFKQNNDGMHSLIATGHLLSVDPDRMVIKRVVLSGHPFKIFTKMAVVRYMFFNRD
DVLWFKPVELRTKWGRRGHIREPVGTHGHMKCSFDGKLKSQDTVLMNLYKRVFPKWTYDA
YVPEPVPWVKSEVSSTVPEVDME
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccatcgctccgggccgctgaagcagcagaataaacctcacaaaagcgggcgg
catcggagtcgcgcatctgcgcagcaggacaacaaaggacgtctagcaccgaaaaccttg
agcaagaaggtgagaaaagagctcagcagagtagaccagaggcaccgtgccagccagctc
cgaaagcagaagaaggaagcggttctggcagagaagagacaactaggcagcaaggatggt
cccccgcatcaggtgttggtgattcccctgcacaacaggatttctttgccggaggccttt
aggctgcttcaggatagcgacactggaactgtgcacttgaatgcttggggaagcaccaac
ttcatgctgttatgccctcgctttaaacatcgatggtttttcacatctgcaagaccaggg
gatctgcacactgtgttagacttggctaaagtggctgacaccatcctgtttctccttgat
ccgttagaaggctgggacagcacaggggattattgcctttcctgcctctttgctcagggc
cttcccacctacacattagctatccagggagtttctggccttccaccgaagaaacaaata
gatgccaagaagaagctaagtaaagcagtggagaagcgctttcctgatgacaaacttctc
ctgttagacactcagcaggaggcagggatactgctgaggcacttggctaaccaaaagcag
cggcatcttgcctttcgagatcgacgggcctacttgtttgcccatgctgttgactttgtg
cctggtgaagagaataacttgatggggaccttgaaaatctcaggttatgttcgtgggcag
agtttgaatgtaaatagcttgctgcatatcattggacatggtgatttccagatgaaacag
atagatgcccctgtggatcctttccctcttaatcctagaatgaccaaatcccaaaagaac
ccagctgtagtgatggagatctgtgctacagatacagtggctgatatggaggaagatatt
aagattctgatgaaggcagatcctaatagacaagaatctttgcaaacagaggttatccca
gatccaatggagggggagcagacttggcccactgaagaggaattgagcgaggcaaatgac
cgtttgaaggaaagatccaaggtggttaagaaggttcccaaaggaacatccagttaccag
gctgaatggattttggatgaagacggtgaaagtagtggggaaggagatgaagatgatgat
atcgaacatgagcattttatggaagaggaatctcaggatgagagtagtgaagagggagaa
gaggagcaatgtgaaacaatgaccataggggagtctgtgcgtgatgatttgtatgatgag
aaagtggatgaggaggccgaggaagaaatgatggaaaaatataaacaagaaagactggag
gagatgtttccagatgaagtagataccccccgagatgtggctgccagaattcgatttcag
aaatacagaggcctcaagagcttcaggacatcaccgtgggatcctaaggaaaatcttcca
cgagattatgctcggatctttcaatttcagaactttactaatactagaaaacgcatcttt
aaagacattgaggaaaaagaggttgaaggagctgaggttggctggtatgtcacactccat
gtctctgaagtgcctgtctcagtgcttgagtgctttaagcagggaaatcccttgattgca
ttctccttactacctcatgaacagaagatgtcagtgttgaacatggtggtgagccggcat
cctggcaacactgaacctgtgaaagcgaaagaggagctgatcttccactgtgggttccgc
cgctttcgagcctcgcctttgttctctcagcacactgcagcggataaacataaatttcag
aggttcctgactgctgacacagccctggttgtaacagtgtatgccccaatcacttttcct
cctgcatctgtactgcttttcaaacagaataatgacggaatgcacagtctcattgccacg
ggccatctcttatcagtggatccagacagaatggtcatcaaaagagttgttttaagtggt
catcctttcaaaatttttactaagatggcagtggtacgctacatgttcttcaatagagat
gatgtgctgtggtttaaaccagtggaactgagaacaaaatggggccgaaggggacacatc
agagaacctgtaggtactcatggccacatgaagtgcagttttgatggaaagctgaaatct
caggacacagtgctaatgaatctatataaacgagttttccctaaatggacttatgatgca
tatgtgccagaaccagtaccttgggtgaaaagtgaggtttcttcaacagtgcctgaagtg
gacatggagtaa
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