Sorex fumeus (smoky shrew): 130036110
Help
Entry
130036110 CDS
T10594
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03030
DNA replication
sfum03420
Nucleotide excision repair
sfum03430
Mismatch repair
sfum03440
Homologous recombination
sfum03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130036110 (RPA1)
03420 Nucleotide excision repair
130036110 (RPA1)
03430 Mismatch repair
130036110 (RPA1)
03440 Homologous recombination
130036110 (RPA1)
03460 Fanconi anemia pathway
130036110 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfum03000
]
130036110 (RPA1)
03032 DNA replication proteins [BR:
sfum03032
]
130036110 (RPA1)
03400 DNA repair and recombination proteins [BR:
sfum03400
]
130036110 (RPA1)
Transcription factors [BR:
sfum03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
130036110 (RPA1)
DNA replication proteins [BR:
sfum03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
130036110 (RPA1)
DNA repair and recombination proteins [BR:
sfum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
130036110 (RPA1)
MMR (mismatch excision repair)
130036110 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
130036110 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Motif
Other DBs
NCBI-GeneID:
130036110
NCBI-ProteinID:
XP_055984059
LinkDB
All DBs
Position
Unknown
AA seq
618 aa
AA seq
DB search
MAGHLSEGALAAIMQQGDTSIKPILQVINIRPITTGNSPPRYRLLMSDGVNTLSSFMLAT
QLNSLVEQELLSSNCICQINRFIVNTLKDGRRVIILMELDVLKSADAVGAKIGNPVPYNE
GHAQQQQQAAPPAVSAANPPASKPPQPNEGSGTGTFATKAGGASKIFGKSGGSSVMSTPG
GTQAKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDETGEIRATAF
NEQVDKFFPLIDVNKVYYFSKGNLKIANKQFSAVKNDYEMTFNNDTSVVPCEDGQHLPTV
KFDFIGIDDLENKPKDSLIDIIGVCKSCEDATKITVKSNNREVSKRNIYLMDTSGKVVCT
TLWGEDADKFDGSRQPVMAIKGARLSDFGGRSLSVLSSSTIIVNPDIPEAYKLRGWFDSE
GQTLDGVSISDLKSGGTVGSSTNWKTLYEVKSENLGHGDKADYFSSVATVVFLRKENCMY
QACPTPDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSANIADFHDNQWVTCFQESAEA
ILGQSTGYLGELKEKNEHAFEEVFQNANFRSFTFKIRVKLETYNDESRIKATVMDVKPVD
YREYSRRLITSIRRNAAM
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggcgggccacttgagcgagggcgccctggcggccataatgcaacagggagatacatct
ataaaacccatcctccaagtcattaacattcgtcctattactacagggaatagtccaccc
cgttatcgactgcttatgagtgatggagtgaacactttgtcctctttcatgttggcaaca
cagttgaactctcttgttgagcaggaactattgtctagcaactgtatttgccagattaac
cgattcattgtgaacactctaaaagatggaaggagagtcattattttgatggagttagat
gttttaaaatcagctgacgcagttggagcaaagattggcaacccagtaccttacaatgaa
ggacacgcacagcagcagcagcaggctgctccccccgcagtttcagcagccaatccccct
gccagcaagcccccacagccaaacgagggttcgggaacaggcacctttgcaaccaaggca
ggtggagcctcaaagatatttggaaaatccggaggatccagtgtaatgagcactcccggt
ggcacccaggccaaggtggtgcccattgccagtctcacaccttaccagtccaagtggact
atttgtgcaagggttaccaacaaaagtcagatccgcacctggagcaattcccgaggggag
gggaaacttttttccctggaactagtggatgaaactggtgaaattcgagctactgctttc
aatgaacaagtggacaagttcttcccccttattgatgtgaacaaggtctattacttctcg
aagggcaacctgaagatcgccaacaaacaattctcagctgttaagaacgactacgagatg
accttcaacaacgacacttctgtagttccctgtgaagacggccagcatttgccgacagtt
aagtttgactttatagggattgatgacctggagaacaagcccaaagactcgctcatcgac
ataattggggtctgcaagagctgcgaagatgccaccaaaatcacggtgaagtccaacaac
agagaagtttctaagagaaatatttatttgatggacacgtcagggaaggtggtgtgtacg
accctgtggggtgaggatgctgataaatttgatggttctagacaacctgtgatggctatc
aaaggagccagattgtctgattttggtggccggagcctctctgtcctatcttcaagcaca
atcattgtgaatcctgacatcccagaggcctataagcttcgtggctggtttgactcagag
ggacaaaccttagatggtgtgtctatctctgatctcaagagtgggggaacagtggggagc
agcaccaactggaaaaccttatacgaagttaaatcggagaacctgggccatggagacaag
gcagactattttagctctgtggcgacagtggtgtttctgcgcaaagagaactgtatgtac
caggcctgcccgactccagactgcaataaaaaagtgatcgatcagcagaatggattatac
cgctgtgaaaagtgtgaccgtgaatttccgaatttcaagtatcgcatgatactgtcagca
aacattgctgattttcatgacaaccagtgggtcacttgtttccaggagtctgcagaagct
atcctcgggcagagcaccggttaccttggagagctaaaggagaagaatgaacacgcgttt
gaggaagtcttccagaatgccaattttcgatctttcacattcaagatcagggtcaaactc
gagacatacaatgatgagtctagaatcaaggccaccgtgatggatgtgaagcccgtggac
taccgagagtacagcagacggctgatcacgagcatcaggagaaacgccgccatgtga
DBGET
integrated database retrieval system
