Sorex fumeus (smoky shrew): 130036543
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Entry
130036543 CDS
T10594
Symbol
BRAT1
Name
(RefSeq) BRCA1-associated ATM activator 1 isoform X1
KO
K23112
BRCA1-associated ATM activator 1
Organism
sfum Sorex fumeus (smoky shrew)
Brite
DNA repair and recombination proteins [BR:
sfum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
130036543 (BRAT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_2
HEAT
RTP1_C1
HEAT_EZ
Cnd1
Motif
Other DBs
NCBI-GeneID:
130036543
NCBI-ProteinID:
XP_055984381
LinkDB
All DBs
Position
Unknown
AA seq
809 aa
AA seq
DB search
MDPECSRLLPALCALLADPRQPVADDTCLEKLLDWFKAETEAGSSVLLLQDHPCLLELLL
QVARDPGLSDRVVSFVLRLAGLLAAEESGFRCLQQGDLLIQLFGEGCAPSRASWAAPSVR
SGWVQGLRSLARHPSALDFLDVLGAVETIFSLQGDPSLFVASAAEQLLAQLLALSLRGSQ
SSEWPPRALQIVAHLEESLRSSATERVTQALHVLTTTFGNSHEPWTQALWAQLSPLVASL
LEEDPIPAAHALVDLLLSVARSPACSSDVGLWEVLAQTLNCLSPTHAGPLALGVLKLQEC
PQALKVQAFGVLLQPLACVLEAAADTPGLEGLPAGAVGDSATVATLLSSKAACAGLLCRT
LAHVELLQPLPQRPEPWPQAALLAATLTVLRLCDGSAEPVSDMKGRLGTLLVGCVRVQRA
ALDFLGTLALGTGPPELVARVFAVLLEYLQSPDCSPTVLKKTFQAALDWLAGAPEMASCH
DLDPPAQLFLGGLLRALQKRLLSPSWEVRDSGLEFLSQAARRLGGQASFTQVLLVSEIPA
LAHQLLQDPESYVRASAVTALGQLSSRGLYGAPGGQQGLLEDLLHVLTTDVDGFPRRAAM
QVLTQWARDSHAARVDPPEPLVARALRAAGQDVDWEVRAQGLELAQVLVSQTLGAPSPPC
PYAPLPLPVTAPQLSPAQALETLCRMHVFHFAFRALLDCDRPVARKSCALLLFLKARTAP
PALGPEAGDSPEPTALEAALQGWQAGEQDPLQEDLGPKAALAALRALDLDRLQDTLAASS
DHTERSARSLLQDMLASAGTWGENEADCY
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggacccggagtgctcccggctgctcccggccctctgcgccctcctggcggaccctcgg
cagcccgtggccgacgacacctgtctggagaagctgctggactggtttaaggcggagacg
gaggcagggtccagtgttctgttgctgcaggaccacccttgcctgctggagctgctgctg
caggtggcgcgcgacccgggcctcagcgacagggtcgtgtcctttgtgctgcgcctggca
gggctcctggcagccgaagagagtggcttccggtgtctgcagcagggcgacctactgatc
cagctctttggggaggggtgcgccccctctcgagcctcctgggcggcccccagcgtgcgc
agtggctgggtccagggactgcgctccctcgcgcggcacccctctgccctggactttctg
gatgtccttggtgctgtggagaccatcttctccctgcagggagaccccagcctgtttgtg
gcctcggccgctgagcagctccttgcccagctcctggctctgtctctgcgcggctcgcag
tcctccgagtggccgccccgtgccctgcagattgtggcccacctggaggagtccctgcgc
tcctcagccaccgagcgggtcacgcaagccttgcacgtgctgaccaccacgtttggcaac
agtcacgagccctggacacaggccctgtgggcacagctgagtcccctggttgccagtctg
ctagaggaggaccccatcccagccgctcacgcactcgtggacctgctcctcagcgtggcc
cgctcccctgcgtgcagttccgatgttggcctgtgggaggtgctggcgcagactctgaac
tgcctgagccccacacacgcagggcctctggccttgggggtcttgaaactgcaggaatgc
ccacaggccctgaaggtgcaggccttcggcgtcctcctccaaccgctggcctgtgttctt
gaagctgcagcggacacccctggacttgagggcttgccggcgggggcggtgggggactcg
gcgacggtggccactctcctgtcctccaaggcggcctgtgcggggttgctgtgccggacg
ctggcccacgtggagctgctgcagcccctgccccagcgccctgagccctggccgcaggct
gcgctgctggccgccaccctgacggttctacgcctctgtgatggttcggccgagcctgtg
tctgacatgaaaggccggctgggcaccctgctggtgggctgcgtgcgggtgcagcgggca
gccctggatttcctgggcacgctggctctgggcacaggtcccccggagctggtggcacga
gtgtttgctgtgctcctggagtacctgcagagcccagactgcagccctacggttctgaag
aagaccttccaggctgcgctggactggctggccggcgcccccgagatggccagctgccat
gacctggaccctcccgctcagctctttcttggaggactcctccgggcactgcagaaacgc
ctgctcagcccgagctgggaggtgcgtgactctggcctggagtttctgagccaggccgcc
cggcgcctgggaggacaggccagcttcacacaggtgctcctggtatcagagatccctgcg
ctcgcccaccagctcctgcaagaccctgagagctatgtccgagccagtgcagtgacagcc
ctggggcagctgtccagcagggggctctacggcgccccggggggccagcagggcctgctg
gaggacctactgcatgttctcactaccgatgtggacggcttcccgcgccgggcggccatg
caggtgctcacacagtgggcgcgggatagccacgccgccagggtcgatcccccggagccc
ctggtggccagagcgctgcgggcagccggccaggatgtggactgggaggtgcgggcgcag
ggcctggagctggcacaggtgcttgtgtcgcagaccttgggtgcacccagccctccctgc
ccctacgcccctctgcccctgccagtgaccgccccgcagctatcccccgcccaggccctt
gagaccctctgccgcatgcacgtcttccactttgcctttcgtgccttgttggactgtgac
cggcccgtcgcccgcaagtcctgtgccctcctccttttcctgaaggcccgcaccgccccc
ccggccctgggcccagaggctggagacagcccggagcccaccgccctggaggccgctctg
caggggtggcaggcgggcgagcaggacccactgcaggaggacctggggcccaaggcagca
ctggccgcgctgcgggcactggacctggacaggctgcaggacacgctggccgcaagcagc
gaccacacagagaggagtgctcggtccctgctgcaggacatgctggcctcggcaggcacg
tggggcgagaatgaggctgactgctactga
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