Sorex fumeus (smoky shrew): 130036808
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Entry
130036808 CDS
T10594
Symbol
NEO1
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04350
TGF-beta signaling pathway
sfum04360
Axon guidance
sfum04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
130036808 (NEO1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130036808 (NEO1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
130036808 (NEO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfum04515
]
130036808 (NEO1)
Cell adhesion molecules [BR:
sfum04515
]
Immunoglobulin superfamily
DCC/UNC5 family
130036808 (NEO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
C2-set_2
Ig_5
fn3_2
SusE
EphA2_TM
Herpes_UL74
TM_ErbB1
TMEM154
Motif
Other DBs
NCBI-GeneID:
130036808
NCBI-ProteinID:
XP_055984674
LinkDB
All DBs
Position
Unknown
AA seq
1483 aa
AA seq
DB search
MAAARGAPRLRGAASRLRWLLLLLLLLLARGAPGAAAARTPPQPPGASIRTFTPFYFLAE
PVDTLSVRGASVILNCSAYSEPSPKIEWKKDGTFLNLVSDDRRQLLPDGSLLISNVVHSK
HNKPDEGYYQCMATVESLGTIVSRTAKLTIAGLPRFTSQPEPSSVYAGNSAVLNCEVNAD
LVPFVRWEQNRQPLHLDDRIIKLPSGTLVISNATEGDEGLYRCVVESGGPPKYSDEAELK
VLPDAEVAANLAFLKQPSSLVRVVGQNVVLPCVASGLPTPVIRWMKNDEVLDTQSSGRLA
LLAGGSLEIIELTEDDAGTYFCIAESGNETIEAHAELTVQAEPEFLKQPTNIYAHESMDI
VFECEVTGKPTPTVKWVKNGDMVIPSDYFKIVKEHNLQVLGLVKSDEGFYQCIAENDVGN
AQAGAQLIILEHDVAIPTLPPTSLTSATTDHLAPAATGPLPSAPRDVVASLVSTRFIKLT
WRTPASDPPGDNLTYSVFYTKEGIARERVENTSRPGEMQVTIQNLMPATVYIFRVVAQNK
HGSGESSAPLRVETQPEVQLPGPAPNIRAYATSPTSITVTWETPLSGNGEIQHYKLYYME
KGTDKEQDIDVSSHAHTINGLKKYTEYSFRVVAYNKHGPGVSTQDVAVRTFSDVPSAAPQ
NLSLEVRNSKSVVIHWQPPPPATQNGQVTGYKIRYRKASRKSDVTETVVAGSQLSQLVEG
LDRGTEYNFRVAALTVNGTGPATDWLSAETFESDLDETRVPEVPSSLHVRPLVTSIVVSW
TPPENQNIVVRGYAIGYGIGSPHAQTIRVDYKQRYYTIENLDPNSHYVITLKAFNNVGEG
VPLYESAVTRPHTDTSEVDLFVINAPYTPVPDPTPMMPPVGVQASILSHDTIRITWADNS
LPKHQKITDSRYYTVRWKTNIPANTKYKNANATTLSYLVTGLKPNTLYEFSVMVTKGRRS
STWSMTAHGTTFELVPTSPPKDVTVVSKEGKPRTIIVNWQPPSEANGKITGYIIYYSTDV
NAEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPKADSSD
KMPNDQASGSSGKGSRLPELGSDYRPPMSGSNSPHGSPTSPLDSNMLLVIIVSVGVITIV
AVVIVAVFCTRRSTSHQKKKRAACKSVNGSHKYKGNSKDVKPPDLWIHHERLELKPIDKS
PDPNPIMTDTPIPRNSQDITPVDNSMDSNIHQRRNSYRGHESEDSMSTLAGRRGMRPKMM
MPFDSQPPQPVVSAHPIHSLDNPHHHFHSSSLASPARSHLYHPGSPWPVGTSMSLSDRVS
STESVRNTPSTDTMPASSSQTCCTDHQDPEGATSSSYLASSQEEDSGQSLPTAHVRPSHP
LKSFAVPAIPPPGPPGYDPALPSTPLLSQQALNHHLHAVKTASIGTLGRSRPPMPVVVPS
APEVQETTRMLEDSESSYEPDELTKEMAHLEGLMKDLNAITTA
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgcggggcgccccaaggctccggggcgcggcgtcccggctccgctggctg
ctgctgctgctgctgctgctgctggcgcgcggggcgccgggcgcggcggccgccaggacc
ccgccgcagcccccaggagccagcattcggacgttcactccattttatttcctcgcggag
ccagtggacacactttcagtgagaggtgcttctgtcatactaaactgctcggcctactca
gaaccttccccaaaaattgaatggaaaaaagatggaacctttttaaacttagtatcagat
gatcgccgccagctcctcccagatgggtctttacttatcagcaacgtggtgcattccaaa
cacaacaagccggatgaaggttactatcagtgtatggccaccgtggaaagtcttgggact
atcgtcagcagaacagccaagctcacgatagcaggtcttccaagatttaccagccaacca
gaaccttcttctgtttatgctgggaatagtgcagttctgaattgtgaagtgaatgcagat
ttggttccatttgtaagatgggaacagaacagacagcctcttcatctggatgatagaatt
atcaaactcccaagtggaacactggtcatcagcaatgcaactgaaggagatgagggactg
tatcgctgtgtggttgaaagtgggggccctcccaagtacagcgatgaagctgaactaaaa
gttcttccagatgctgaagttgcagcaaacttggcatttttgaagcagccttcctccttg
gtcagagttgttggtcagaatgtggtgctgccgtgtgtcgcttctggacttccaactcca
gtcatccggtggatgaaaaatgacgaggttcttgacacacaaagctccggaagactggca
ttactggcagggggctcactggagatcatcgaactcacagaggacgatgcagggacttac
ttctgtatagcggagagtggaaatgagaccattgaagctcatgcagagctcacagtacaa
gccgaacctgaattcctgaagcagcctacaaatatatatgctcatgaatcgatggatatt
gtatttgagtgtgaagtgactgggaaaccaactccaactgtgaagtgggtcaagaatggg
gatatggtcataccaagtgattactttaagattgtaaaggaacataatcttcaagttttg
ggtctggtgaaatcagatgaaggcttttatcagtgcattgctgagaacgatgttggaaat
gcacaagctggagcccagctgatcattcttgagcatgatgttgccatcccaacattacct
cccacttcactgaccagtgccactactgaccatctagcgccagccgccacggggccactg
ccttcagcgccgcgggacgtcgtggcctccctggtctccacccgcttcatcaaactgaca
tggcggacgcctgcgtcagacccccccggggacaacctcacctactctgtcttctacacc
aaggagggcattgccagggaacgtgttgagaataccagccgcccgggagaaatgcaggtg
accattcagaacctgatgccggccaccgtgtacatcttcagagtcgtggctcagaacaag
cacggctccggagagagctcagccccgctccgcgtggaaacacaacctgaggtccagctt
cctggcccggcacctaacatccgagcatacgcaacttcgcctacctctatcactgtgacg
tgggaaactccgctctctggcaatggggaaattcagcattacaagctgtactacatggag
aaagggacggacaaagagcaggatattgatgtttctagtcatgcccacaccattaacgga
ttgaaaaaatacacggagtacagtttccgagtggtggcttacaacaagcatggtcccggc
gtctccacacaagacgtggctgtccgaacattctccgacgttcccagtgctgctcctcag
aatctatctttagaagtaagaaattcaaagagcgttgtcatacactggcagccacctcct
ccggccacacagaacgggcaggtcactggctacaagatccgctaccgaaaggcgtctcga
aagagcgacgtcaccgagaccgtggtggccgggagccagctgtcccagctggtcgaaggt
cttgatcggggaactgagtataatttccgagtggctgctctcaccgtcaatggcacgggc
ccagcaactgactggctgtctgctgagacgtttgaaagtgacttagatgaaacccgtgtt
cccgaagtgcccagttctctgcacgtccgcccccttgtcactagcatcgtggtgagctgg
actccacccgagaaccagaacatcgtggtcagaggctacgccatcgggtacggcattggc
agcccccatgcccagaccatcagggtggattataagcagcgctactacaccatcgaaaat
ctggaccccaattctcactacgtgatcaccctgaaggcattcaacaatgtgggcgaaggt
gttcccttgtacgagagtgccgtgaccagaccccacacagacacttctgaagttgattta
tttgttattaatgccccatacactccagtgccagatcccacccccatgatgcctcccgtg
ggggtccaggcttccattctgagtcacgacaccatccggattacctgggcggacaactcc
ctgcccaaacaccagaagatcacagactcccgctactacacagtccgctggaaaaccaac
atcccggctaacaccaagtacaagaatgcaaatgccacaactttgagttacttggtgact
ggtttaaaaccaaatacactctacgaattttctgtgatggtcaccaaaggccgaaggtcc
agcacatggagtatgacagcccatgggaccacctttgaattagttcctacttctccaccc
aaggacgtgacagttgtgagtaaagaggggaaaccgaggaccatcattgtgaattggcag
ccaccctctgaagccaatggcaaaattacaggttacatcatctattacagcactgacgtg
aatgcagagattcacgactgggtcattgaaccagttgtgggaaacaggctcactcaccaa
atccaggagttaaccctggacacaccatactacttcaaaatccaagcccggaactccaaa
ggcatggggcccatgtccgaagccgtccagttcagaacgcctaaagcggactcctctgat
aaaatgcctaatgaccaagcctcagggtcttcgggaaaagggagtcgacttccagaactc
ggatccgactacagacctccgatgagcggcagcaacagcccacacgggagccccacgtca
cccctggacagcaacatgctcctggtcattatcgtctctgtgggcgtcatcaccatcgtg
gcggtcgtgatcgtggccgtcttctgcacccgccgcagcacctctcaccagaagaagaaa
cgagcagcttgcaagtccgtgaacggctcccacaagtacaaagggaactccaaagacgtc
aaaccgccagacctctggatccatcacgagaggctggagctgaagcccatcgacaagtcc
ccagacccaaaccccatcatgaccgacacgccaattccccggaactcgcaggacatcacg
cctgtcgacaactccatggacagcaacatccaccagaggcggaactcctacagagggcat
gaatcagaagacagcatgtccacactagctgggaggcgaggaatgcgtcccaagatgatg
atgccgtttgactcccagccaccccagcctgtggttagtgcccatcccatccattccctc
gataaccctcaccaccatttccactccagcagcctcgcttctccagcccgcagtcatctc
taccacccgggcagcccatggcccgtgggcacgtccatgtccctttcagacagggtcagt
tccacagagtccgtccgcaacacccccagcaccgacaccatgccagcctcctcgtcccag
acgtgttgcacggaccaccaggaccccgaaggtgctaccagctcttcctacctggccagc
tcccaggaggaagactcgggccagagtctccccacggcccacgtccgcccctcccacccc
ctgaagagcttcgcggtgcccgccatccctcccccgggacctcctggctacgaccccgcc
ctgcccagcaccccattgctgtcccagcaagccctcaaccatcacctccacgcggtgaag
acggcctccatagggacgctggggcggagccggccccccatgccagtggtggtccccagt
gcccccgaagtgcaggaaaccacacggatgctggaggactcggagagtagctacgaacca
gatgagctgaccaaagagatggcccacctggaaggactcatgaaggacctcaatgccatc
acgacggcatga
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integrated database retrieval system
