Sorex fumeus (smoky shrew): 130036859
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Entry
130036859 CDS
T10594
Symbol
CSPG4
Name
(RefSeq) chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
sfum Sorex fumeus (smoky shrew)
Brite
Proteoglycans [BR:
sfum00535
]
Cell surface proteoglycans
Others
130036859 (CSPG4)
Lectins [BR:
sfum04091
]
C-Type lectins
Others
130036859 (CSPG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130036859
NCBI-ProteinID:
XP_055984752
LinkDB
All DBs
Position
Unknown
AA seq
2319 aa
AA seq
DB search
MRCGRRSGPRAPALALAVTLALWATLESASAASFFGESHLEVPVAAALTHVDLRLQFSTT
QPEGLLLLAAGPTDHLLLQLFSGRLQVRLVLGQEEVALRTPAETALSDSALHSVELSLAD
NWAVLSVDGVLNTSAPAPAAPLEVPYGVFVGGTGNLDLAYLRAISRPLRGCIHAATLNGR
NLLRPLNPGVLEGCAEEFSAGDDVALGFSGPHSLAAFPAWGTRDEGTLEFTLVTRSQQAP
LAFQAGGRQGDFIYVDVFKGHLRAVVEKGQGTVLLHNSVPVADGQPHEVSVHVDTHQLEI
SVDQYPTRTSNRGVPSYLEPQGSLLLGGLDAEATRHLQEHRLGLAPEALQLSLLGCLEDL
SVNGRRLGLREAVLTRGMAAGCRLEEEEYEEDAYGPYEAFSTLAPDVWEVMELPEPCAPE
PGLPPVFANFTQLLTISPLVVAEGGTAWLEWRHVQPTLDLSLAELRKSQVLFSVSGGARH
GQLELDIPGAQARKMFTLLDVVNRKARFVHDGSEDTSDQLVLEVSVTARGPVPSCLRKGQ
TYLLPIQVSPVNDPPRVVFPNGNLMVILEHTQKPLGPEIFQAYDPDSACEGLTFQFLGAP
AGLPVERRDQPGQPATEFSCRELQAGGLVYVHRGGPAQDLTFRVSDGLLASAPATLKVVA
VRPAIQALQNTGLWVEQGSAAPILPANLSVETNAVGQQVSVLFRLTSPPRLGELQKQGAG
GAEGAEWRPAQAFHQHDVEQGRVRYLSTDPQHHAQDPREELGLEVQVGQEVLRNLTFPVH
VRRATVTLLRLEPLLARSTQQEPLTAAHLEASLEEGAAGPAPASFHYEVVQAPRKGNLRL
RGARLSDGQGFSQDDVRAGRVTYAATARAAQAAEDTFRFRVTAPPGRFSPLYTFRVRIGG
DPDAPVLTNALLAVPEGGQAVLSADHLFVESRSSASYVYEVMEQPRHGRLAWRGAQGAAP
VRAFTNDDLLHGRLLYLHDDSETTEDDIPFVATRQGEGSGGLAWEEVRGVVRVAVQPVND
HAPVQTVSRALRVARGGRRLLTTEHVAFSDADAGFADAQLVLTRKDLLFGSVVAADEPSR
PLYRFTQDDLRRRRVLFVHSGADRGWIQLQVSDGRHQATAQVEVQASEPYLRVANGSRLV
VPQGGRGAIDTDVLPLDTNLDIRSGDEVRFRLTGGPRWGQLLREDQPVAAFTLQDLKAGA
LVYSHNGSLSARDSLAFSVEAGPLQAEASLQVTVTLEGPLAPLRLVQHKKIYVFQGEAAE
IRRDQLEAAQEAVVPADIVFTVTRPPRAGSLVLLSHGPAAAEPPSLEPVQSFSQEAVNGG
RVLYLHSGPPTWGDTFSLDVTSGLGAPLEDIRVELEVLPADIPLEVQNFSVPEGGTRTLA
PPLLRVAGPYFPTMPGLELQVLEGPQHGVLRREDGPAHGTLSTFSWAEVEQQLVRYVHDG
SETWADSFVLVANASQMDRQSRPVTVAITVLPVNDQPPVLIVNTGLQVWEGATVPIPPEA
LQATDEDSGPEDLVYTVEQVSSGQVALRSEPGTAVSSFTQAQLNAGQVLFSHRGALDGGF
RFSLSDGEHASPGHVFRVAAQRQLVLSLDGSRTLSVCPGSVQPLGSQNLQARSSGHTDAR
LLLYHVLRGPQLGRLLHAQQASAEESLGNFTQAEVSSGQILYEHVMPPEPFWEAQDTVEL
RLSSPPAPDLDATLTVTVSFEAACPQRPSRLWKNQGLWVPEGQRAEITVAALDASNFLGS
VPAPRRAEHDVLFQVTQFPVRGQLLLSGEPLHAGRAHFLQSALAAGQLAYAHGGGGTQPD
GFRFRAHLRGPAGTPAAGPQTSEAFAVTVTVAVRDDGSAPGPWASTPLRLPRGSRAPVSR
AQLSAPDPDAAPAEIQYEVRRAPPHGFLSLVGAGAGPVRRFTQADVDAGRLLFTANGSSV
PGAFQLSVSDGAGPPRPVTLAVDVLPAGIEVQLRAPLEVPQALGRRALSRQQLRVVSDRE
EPDAEYRLAQAPRFGRLLVAGQPAAAFSQRQVEQGQVVFAFTDLSSPRDRFRVEARARGA
NASATVNVTVAALLRVGAGGPWPQGATLRLDPSVLDAGELANRTGSVPRFRLLAGPRRGR
LVRVPRAGAERVEQFTQRDLEDGRLGLELAAPEPGAAGPAGDSLTLELWARGVPPAVASL
PFTTEPYDAGRAYRVALLRLPAPARADAGQPTGGPRPAASSPAPTAARGGLLGFLEANMF
SVIIPVSLVLLLLALVLPLLFYLRKRNKTGKHDVQVLAAKPRNGLAGDAETFRKVEPGQA
IPLTAVPGQGAPPGTQPDPELLQFCRTPNPALKNGQYWV
NT seq
6960 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgtggccggcggtccgggccacgcgcgcctgccctggccctggcggtgaccttg
gcgctgtgggccaccctggagtccgcgtccgcagcctccttcttcggggagagccacctg
gaggtgcccgtggccgcggctctgacccacgtagacctccggctgcagttctccaccacc
caacccgaaggcctgcttctcctggccgcgggccccacagaccacctcctcctgcagctc
ttctccggacgcctgcaggtcagactggtcctgggccaggaggaggtggcactgcgaaca
cctgcagagacggccctgagtgactcggccctgcacagcgtggagctgagcctggccgac
aactgggccgtgctgtccgtcgacggggtcctgaacacctccgccccggccccggcagcc
cccttagaggtcccctatggggtcttcgtggggggcacagggaacctggacttggcctac
ctgagggcaatcagccgacccctgaggggctgcatccacgcggccaccctcaacgggcgc
aacctcctgcggccgctgaacccgggcgtgctggagggctgcgccgaagagttttctgcc
ggggacgacgtggccttgggcttctcgggaccccactccctggctgccttccctgcctgg
ggcacccgggacgagggcaccctggagttcacgctcgtcacacgcagccagcaggcgccc
ctggccttccaggcgggcggccggcagggggacttcatctacgtggacgtgttcaagggc
cacctgcgggccgtggtggagaagggccagggcaccgtcctgctgcacaacagcgtgccc
gtggccgacgggcagccccacgaggtcagcgtccacgtggacacgcaccagctggaaatc
tcagtggaccagtaccccacgcgcacctccaaccgcggcgtccccagctacctggagccc
caaggcagcctgctcctgggcgggctggacgccgaggccacgcgccacctgcaggagcac
cgcctgggcctggcccccgaggcgctccagctgtccctgctgggctgcctggaggacctg
agcgtcaacggccgccggctgggactgcgggaggccgtgctgacccggggcatggcggcc
ggctgcaggctggaggaagaggagtacgaggaagacgcctacggcccctacgaggccttc
tccacgctggcgcccgacgtctgggaggtcatggagctgcccgagccctgcgcgccggag
ccggggctgcccccggtcttcgccaatttcacccagctgctgaccatcagcccgctggtg
gtggccgaggggggcaccgcctggctcgagtggcgccacgtgcagcccaccctggacctg
agcctggccgagctgcgcaagtcccaggtgctgttcagcgtgagcggcggggcccgccac
gggcagctggagctggacattcccggggcgcaggcgcggaagatgttcaccctcctggac
gtggtgaaccgcaaggcgcgcttcgtccacgacggctccgaggacaccagcgaccagctg
gtgctggaggtgtccgtcaccgcccgggggcccgtgccgtcctgcctgcgcaagggccag
acctacctgctgcccatccaggtcagcccggtcaacgacccaccccgcgtcgtcttcccc
aacggcaacctcatggtcatcctggagcacacgcagaagccgctggggcccgagatcttc
caggcctacgaccccgactcggcctgtgaggggctcaccttccagttcctgggcgccccc
gccggcctgcccgtggagcgccgtgaccagccggggcagccggccaccgagttctcctgc
cgggagctgcaggcgggcggcctggtgtacgtgcaccggggtgggccggcccaggacctg
acgttccgggtcagcgacgggctgctggccagcgccccggccacgctgaaggtggtggcc
gtccggccggccatccaggcgctgcagaacacggggctgtgggtggagcagggctccgcc
gcccccatcctgcccgccaacctgtcggtggagaccaacgcggtgggccagcaggtcagc
gtgctgttccggctcaccagcccgccccggctcggggagctgcagaagcaaggcgccggc
ggggccgagggcgccgagtggcggcccgcgcaggccttccaccagcacgacgtggagcag
ggccgcgtgaggtacctgagcaccgacccgcagcaccacgcgcaggacccgcgggaggag
ctggggctggaggtgcaggtgggccaggaggtgctccgcaacctgaccttcccggtgcac
gtgcgccgggccacggtgacgctgctgcggctggagccgctgctcgcgcggagcacccag
caggagcccctcaccgcggcgcacctggaggccagcctggaggagggcgcggccggcccg
gcgccggccagcttccactacgaggtggtgcaggccccgcgcaagggcaacctgcggctg
cggggcgcgcggctgtcggacgggcagggcttcagccaggacgacgtgcgcgccgggcgg
gtgacctacgcggccacggcgcgcgcggcgcaggcggccgaggacacgttccgcttccgc
gtcacggcgccgccgggccgcttctcgccgctctacacgttccgcgtgcgcatcggcggc
gaccccgacgcgccggtgctcaccaacgcgctcctggccgtgcccgagggcggccaggcc
gtgctctcggccgaccacctcttcgtggagagccgcagcagcgccagctacgtgtacgag
gtgatggagcagccgcgccacgggcgcctggcgtggcgcggggcgcagggggccgcgccg
gtccgcgccttcaccaacgacgacctgctgcacggccggctgctctacctgcacgacgac
tcggagaccacggaggacgacatccccttcgtggccacgcggcagggcgagggcagcggc
ggcctggcctgggaggaggtgcgcggcgtggtgcgcgtggccgtgcagcccgtcaacgac
cacgcgcccgtgcagaccgtcagccgcgcgctgcgcgtggcgcgcggcggccggcggctg
ctcaccaccgagcacgtggccttcagcgacgccgacgcgggcttcgccgacgcgcagctg
gtgctgacccgcaaggacctgctgttcggcagcgtcgtggcggccgacgagccctcgcgg
cccctctaccgcttcacccaggacgacctgcggcggcggcgcgtcctgttcgtgcactcg
ggcgccgaccgcggctggatccagctgcaggtgtcggacggccggcaccaggccacggcg
caggtggaggtgcaggcctccgagccctacctgcgggtggccaacggctcccgcctcgtg
gtgccccaggggggccggggggccatcgacacggacgtgctgccgttggataccaacctg
gacatccgcagcggggacgaggtccgcttccggctcaccggcggcccacgctggggccag
ctgctccgggaggaccagcccgtcgcggccttcaccctgcaggacctgaaggccggggcc
ctcgtgtacagccacaacggcagcctcagcgcccgggacagcctggccttctccgtggag
gcggggcccctgcaggccgaggccagcctgcaggtgacggtcactctggaggggccgctg
gccccactgcgcctggtgcagcacaagaaaatctacgtcttccagggcgaggccgcggag
atcagaagggaccagctggaggcagcccaggaggccgtggtgcctgcggacatcgtgttc
acggtgacgcgtccccctcgcgctggctcgctggtgctgctgtctcacggcccagcagcg
gccgagccgcccagcctggagcccgtgcagagcttctcccaggaggcagtgaacggaggc
cgggtcctgtacctgcattcgggaccgccgacctggggtgacaccttctccctggatgtg
acctcgggattgggggccccgctggaggacatccgtgtggagctggaggtgctgccggct
gacatccccttggaggtgcagaacttcagcgtccctgagggcggcacccgcaccctggcg
cccccgctgctccgggtggccgggccctacttccccaccatgccggggctggagctgcag
gtgctggaggggccccagcacggggtcctgcggagagaggatggccctgcccacgggacc
ctcagcaccttctcctgggcagaggtggagcagcagctggtccgctatgtgcacgacggc
agcgagacgtgggcagacagctttgtcctcgtggccaacgcctcgcagatggaccgccag
agccgcccggtcactgtggccatcaccgtcctccccgtcaacgaccagccccccgtcctc
atcgtgaacacgggcctgcaggtgtgggaaggggccactgtgcccatccccccagaggcc
ctccaggccacggatgaggactcgggccctgaggacttggtctacaccgtggagcaggtc
agcagtgggcaggtggcactgcgctcagagccgggcacggccgtgagcagcttcacgcaa
gcccagctgaatgcagggcaggtgctgttctcacacagaggagcactggacggcggcttc
cgcttcagcctctctgacggtgagcacgcgtctccgggacacgtcttccgcgtggcggct
cagaggcagctggtcctctcgctggacggtagccggacgctgagcgtgtgcccagggtcc
gtccagccgctcggcagccagaacctacaggccaggtccagcggccacacggacgcccgc
ctcctgctgtaccacgtgctgcgggggccccagctgggccggctactgcacgcccagcag
gccagcgccgaggagtccctggggaacttcactcaggccgaggtctccagcgggcaaatc
ctctacgagcacgtgatgccccccgagcccttctgggaggcccaggacaccgtggaactg
cggctgtcctcgccacccgcccccgacctggacgccaccctcaccgtgaccgtgtccttt
gaggccgcgtgtccccagcgccccagccgcctctggaagaaccaaggtctctgggtcccc
gaaggccagcgcgccgagatcaccgtggccgcgctggacgcctccaacttcctgggcagc
gtgccggccccgcggcgcgccgagcacgacgtcctcttccaggtcacgcagttccccgtg
cgggggcagctgctgctgtccggggagcccctccacgccgggcgcgcccacttcctgcag
tcggcgctggccgcggggcagctggcctacgcgcacggcggcggcggcacgcagcccgac
ggcttccgcttccgcgcgcacctgcggggccccgcggggacccccgcggcggggccgcag
acctccgaggccttcgccgtcaccgtcaccgtcgccgtgcgcgacgacgggagcgcgccc
gggccgtgggcctcgacgccgctgcggctgccgcggggctcccgcgcgcccgtgtcccgc
gcgcagctgagcgcgccggaccccgacgcggcgcccgcggagatccagtacgaggtgcgg
cgcgcgcccccgcacggcttcctgagcctggtgggcgcgggcgcggggcccgtgcgccgc
ttcacgcaggccgacgtggacgcgggccggctgctgttcacggccaacggcagcagcgtg
ccgggcgccttccagctgagcgtgtccgacggcgcgggcccgccgcggcccgtcacgctg
gccgtggacgtgctgcccgcgggcatcgaggtgcagctgcgcgccccgctggaggtgccg
caggcgctcggccgccgcgcgctgagccgccagcagctgcgggtggtgtcggaccgcgag
gagccggacgccgagtaccgcctggcccaggcgccgcgcttcgggcgcctgctggtggcc
gggcagccggccgccgccttcagccagcgccaggtggagcagggccaggtggtcttcgcc
ttcaccgacctctcctccccgcgcgaccgcttccgcgtggaggcgcgcgcgcgcggcgcc
aacgcctcggccacggtgaacgtcaccgtcgcggcgctgctgcgcgtgggcgccggcggg
ccgtggccgcagggcgccacgctgcgcctggacccgtccgtgctggacgcgggcgagctg
gccaaccgcacgggcagcgtgccccgcttccggctgctggcggggccccggcgcggccgc
ctggtgcgcgtgccgcgggccggcgcggagcgggtggagcagttcacgcagcgggacctg
gaggacgggcggctggggctggagctggccgcgcccgagcccggggcggccgggcccgcc
ggcgacagcctcacgctggagctgtgggcgcggggcgtgccgcccgccgtggcctcgctg
cccttcaccacggagccctacgacgccggccgcgcctaccgcgtggccctgctccgcctc
cccgcgccggcccgggcggacgcgggccagcccacgggcgggccgcgcccggccgcctcc
agcccggcgcccacggcggccaggggcggcctcctgggcttcctggaggccaacatgttc
agcgtcatcatccccgtgagcctggtcctgctgctgctggcgctcgtcctgccgctgctc
ttctacctccgcaaacgcaacaagacgggcaaacacgacgtccaggtgctggcggccaag
ccccgcaacggcctggccggcgacgccgagaccttccgcaaggtggagccgggccaggcc
atcccgctcacggccgtgcccggccagggcgccccgccggggacccagcccgaccccgag
ctgctgcagttctgccggacacccaaccctgccctcaagaacggccagtactgggtgtga
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