Sorex fumeus (smoky shrew): 130037371
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Entry
130037371 CDS
T10594
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03082
ATP-dependent chromatin remodeling
sfum04714
Thermogenesis
sfum05225
Hepatocellular carcinoma
Brite
Transcription machinery [BR:
sfum03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130037371 (SMARCC1)
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
130037371 (SMARCC1)
PBAF complex
130037371 (SMARCC1)
GBAF(ncBAF) complex
130037371 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130037371
NCBI-ProteinID:
XP_055985185
LinkDB
All DBs
Position
Unknown
AA seq
1106 aa
AA seq
DB search
MAAAAGSGGPGAATGAAGAGGAAAAAGLAAYRRKDGGPASKFWESPETVSQLDSVRVWLG
KHYKKYVHADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKSGGTLCH
ILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQSNCLTRPNIYLIPDIELKL
ANKLKDIIKRHQGTFTDEKSKASHHVYPYPSSQEDEEWLRPVMRKEKQVLVHWGFYPDSY
DTWVHSNDVDAEIEDPPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDENRKPVSFRQRI
STKNEEPVRSPERRDRKASANARKRKHSPSPPPPAPTESRKKSGKKGQASLYGKRRNQKE
EEEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEEAVTTGG
KEDEDPGKGDQSRSVDTGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNK
SKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVD
PESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQIPAAQQMLNFPEKNKEKPIDLQNFG
LRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILH
FLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALE
EFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEAAEEEK
MEPDTDGQQPEKAEIKGENEIDENDKAQDGENEKNSEKEQDSEVSEDAKSEEKETEENKE
LTDTCKERENDVGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLV
ETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQ
QQHGQNPQQAHPHSGGPGLAPLGAAGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQIPGP
GSMIPGQPMPGRMIPTVAANIHPAGTGPAPPGMPPMPGNILGPRVPLTAPNGMYPPPPQQ
QQPLPPPPADGVPPPPAPGPPASAAP
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcggctggcagtggcgggccgggggcggcgacgggcgccgcgggcgcggga
ggtgcggcggcggccgcgggcctagccgcgtatcggcggaaggacgggggcccggccagc
aagttttgggagagcccggagacggtgtcccagctggattccgtgcgcgtctggctgggc
aagcactacaagaagtatgttcatgcagatgctcctaccaataaaacactagctgggcta
gtagtgcaacttctccagttccaggaagatgcctttgggaagcatgtcaccaacccagct
tttaccaaactccctgcgaaatgtttcatggatttcaaatctggaggcaccttgtgtcat
attcttggggctgcttacaagtataaaaatgaacagggatggcggaggtttgatctacag
aatccatcccgaatggatcgtaatgttgaaatgtttatgaacattgaaaaaacattggta
cagagtaattgtctgaccagacccaacatctacctcattccagacattgagctgaagttg
gctaacaaattgaaagatatcatcaaacggcatcagggtacatttactgatgagaagtca
aaagcttcacaccatgtttatccatatccttcctcacaagaggatgaagagtggttgaga
cctgtgatgagaaaagagaagcaggtgttagtgcactgggggttttacccagacagctat
gatacatgggtccatagtaatgatgttgatgcagaaattgaagacccaccaattccagaa
aagccatggaaggttcatgcaaaatggattttggacactgatgttttcaatgaatggatg
aatgaggaggattacgaggtagatgaaaacaggaaacctgtgagttttcgtcagcgaatt
tcaacgaagaatgaagagccagtcagaagtccagagagaagagatagaaaagcatcagcg
aatgctcgtaaaaggaaacattccccttccccaccacctccagctcccacagaatcacgg
aagaagagtgggaagaaagggcaagctagtctttatgggaagcgcagaaatcagaaagaa
gaggaggagcaagaagatcttaccaaggacatggaggacccaacacctgtacccaacatc
gaggaagttgtacttccaaaaaatgtaaatccaaagaaagattctgaaaacacaccggtt
aaaggaggaacagtagcagatctagatgagcaagatgaagaagcagtcacaacaggagga
aaggaagatgaagatcctggcaaaggtgatcagagtcgttcagtggatactggtgaagat
aatgtgacagagcagactaatcacattatcattcctagctatgcatcatggtttgattat
aactgtattcacgtgattgagcggcgtgctctccccgagttcttcaatgggaaaaacaaa
tccaagactccagaaatatatttggcatatcgaaattttatgattgatacatatcgccta
aacccacaggagtatttaaccagcactgcttgtcgtaggaatttaactggagatgtttgt
gcggtgatgagggttcatgcctttttggagcagtgggggctcgttaattaccaagtagat
cctgaaagtagacccatggctatgggacctcctcctactcctcatttcaatgtattggct
gataccccctctgggcttgtgcctctgcatcttcgatcccctcagatacctgctgctcag
cagatgttaaattttcctgagaaaaacaaggaaaaaccaattgatttacagaactttggt
ctacgtactgatatttattccaagaaaaccttagcaaagagtaaaggtgcaagtgctgga
agagaatggactgaacaggagacccttctgctcctggaggccctggagatgtacaaggat
gattggaacaaagtgtcagaacatgtgggaagtcgtactcaggatgaatgcatcctccat
tttttgagacttcccattgaggacccataccttgagaattccgatgcttcccttggacct
ctcgcctaccagcctgttccattcagtcagtctggaaacccagtcatgagcactgttgct
tttttggcgtctgtagtagaccctcgtgtggcatctgctgcagcaaaagcagctttggag
gagttttctcgagtccgggaagaggtaccactggaattggttgaagctcatgtcaaaaaa
gtgcaagaagcagcacgagcctctgggaaagtggatcccacttatggcctggaaagcagc
tgcattgcaggcacaggtcctgatgagccagagaagcttgaagctgcagaggaagaaaaa
atggagccagatactgatggtcagcagcctgaaaaggcagaaatcaaaggagaaaatgaa
atagatgaaaatgataaagcacaagatggagaaaatgaaaaaaatagtgagaaggaacaa
gatagtgaagttagtgaagatgccaaatcagaagaaaaggagactgaagaaaacaaggaa
ctcacggatacttgtaaagaaagagaaaatgatgttggaaagaagaaagtagaacatgaa
atttctgagggaaatgtcgctacagccgcagcagctgctcttgcctcagctgcaaccaaa
gccaagcacctggctgccgtagaagagcggaagatcaagtctctagtcgctctcctggtt
gagacacagatgaagaaactggagatcaaacttcgacattttgaggagctggaaactatc
atggacagagagaaagaagctttagaacaacagagacagcagttgcttactgaacgccag
aacttccacatggaacagctgaaatacgctgaattacgagcccgacagcaaatggaacag
cagcagcatgggcaaaacccacagcaggctcacccgcactcgggagggcctggcctagcg
ccacttggagcagcagggcacccaggcatgatgcctcatcagcagccacctccctaccct
ctgatgcaccaccagatgccaccacctcatccaccccagccaggtcagataccaggccca
ggttccatgattcctgggcagcctatgccaggccgcatgattcccactgttgcagccaac
attcatcctgctgggactggccctgcccctcctggtatgcctccaatgccaggaaacatc
ttaggaccccgggtgccactcacagcacctaatggcatgtacccccctccaccgcagcag
cagcagccactgccaccaccgcctgcagacggggtcccgccacctcctgctccaggccca
ccagcctcggccgctccctag
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