Sorex fumeus (smoky shrew): 130037429
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Entry
130037429 CDS
T10594
Symbol
EDEM1
Name
(RefSeq) ER degradation-enhancing alpha-mannosidase-like protein 1
KO
K10084
ER degradation enhancer, mannosidase alpha-like 1
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130037429 (EDEM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
sfum04091
]
130037429 (EDEM1)
Lectins [BR:
sfum04091
]
M-type lectins
130037429 (EDEM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_47
Motif
Other DBs
NCBI-GeneID:
130037429
NCBI-ProteinID:
XP_055985247
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MDGPRVPPAPHGARRDDAALRLCEAPRAQRPQGLPSRASGRAPSGRPASGADGSGHVRIR
RAARGGGAGGPEAQDARGPARPCPGERSCWRCCCCAWACTRRSGWRSARARRPPARPGRG
PARRPRAPRGRRPPPPPPRGAPWGAGRGRDEYERRYAGAFPPGLRARMRDRARGMFVFGY
DNYMAHAFPQDELNPIDCRGRGPDRGDPSNLNINDVLGNYSLTLVDALDTLAIMGNSSEF
QKAVRLVIDTVSFDRDSTVQVFEATIRVLGSLLSAHRIITDTKQPFGDMAIKDYDNELLH
MAHDLAVRLLPAFENTKTGIPYPRVNLKTGVPPDSNNETCTAGAGSLLVEFGILSRLLGD
STFEWVARRAVKALWSLRSNDTGLLGNVVNIQTGHWVGKQSGLGAGLDSFYEYLLKAYIL
FGEDDDLHMFNAAYRSIQSYMRRGREACNEGEGDPPLYVNVNMFSGQLMNTWIDSLQAFF
PGLQVLIGDVEDAICLHAFYYAIWKRYGALPERYNWQLQAPDVLFYPLRPELVESTYLLY
QATKNPFYLHVGMDILQSLEKHTKVKCGYATLHHVIDKSKEDRMESFFLSETCKYLYLLF
DEENPVHKSGTRYMFTTEGHIMSVDKHLRESPWKELFAEGGRPGPGAKASELRILNSSSN
CNRVPDERRYSLPLKSVYMRQIDQMVGLL
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggacggaccccgggtccccccggccccccacggggcgcgcagagacgacgcagcactc
cggctctgcgaggccccccgggcccagcggccgcaggggctgccctcccgggcctccggg
cgcgcgccctcgggccggccggcctcgggggcggacgggtcgggccacgtccgcatccgg
cgggccgcgcgcggcggcggcgcgggcgggcccgaggcgcaggatgcccgcgggccggcg
cggccatgccctggcgagcgctcgtgctggcgctgctgctgctgcgcctgggcctgcacg
cggcgctctggctggcgctcggcccgggcccgccgccccccggcccggcctggccgcggc
cccgcccggcgcccgcgggccccgcgcggccgccgccccccgcccccgcccccgcggggg
gcgccgtggggcgcgggccgcgggcgcgacgagtacgagcggcgctacgcgggcgccttc
ccgccggggctgcgcgcccgcatgcgcgaccgcgcgcggggcatgttcgtcttcggctac
gacaactacatggcgcacgccttcccgcaggacgagctcaaccccatcgactgccgcggc
cgcggccccgaccgcggggacccttcaaacctgaatatcaatgatgtcctcgggaactac
tccttgacgctggtcgacgcgctggacacgctggcaataatggggaattcctccgagttc
cagaaagccgtcaggctggtgatcgacaccgtctccttcgaccgagactccaccgtgcag
gtgtttgaggccacgataagggtcctgggcagcctcctctccgcacacaggatcatcacc
gacaccaagcagcccttcggggacatggccatcaaggactacgacaacgagctgctgcac
atggcccacgacctggctgtgcggctgctgccggccttcgagaacaccaagaccgggatc
ccctacccgcgggtgaacctcaagacgggcgtcccccctgacagcaacaacgagacgtgc
acggcgggcgcgggctccctcctggtggagttcgggatcctgagccgcctgctgggggac
tccacgttcgagtgggtggcccggcgggcagtgaaggccctctggagtctgcggagcaac
gacacgggcttgttaggcaacgtcgtgaacatccagacgggccactgggtgggcaagcag
agcggcctgggcgccggcctggactccttctacgagtacctgctcaaggcctacatcctc
tttggcgaggacgacgacctgcacatgttcaacgccgcctaccgcagcatccagagctac
atgcgcagaggccgggaagcctgcaacgagggtgaaggggacccgccgctctacgtcaac
gtgaacatgttcagcgggcagctgatgaacacgtggatcgactccctgcaggccttcttc
ccgggactgcaggtcctgattggggacgtggaggacgccatctgcctgcacgccttctac
tacgccatctggaagcgctatggggccctccctgagcgctacaactggcagctgcaggcg
cccgacgtgctcttctacccgctgcggcccgagctggtggagtccacctacctgctctac
caggccaccaagaaccccttctacctccacgtgggcatggacatcctgcagagcctggag
aagcacacgaaagtcaagtgtgggtacgcgacgctgcaccacgtcatcgacaagtccaag
gaggaccgcatggagagcttcttcctcagcgagacctgcaagtacctctacctgctgttt
gacgaggagaacccggtgcacaagtctgggaccagatacatgttcacgacggagggccac
atcatgtccgtggacaagcacctgcgcgagtctccctggaaggagctgttcgccgagggc
ggcaggcccggcccgggggccaaggcgtctgagttacgcatcctcaactccagctccaac
tgcaaccgcgtccccgacgagaggcgctactcgcttcccctgaagagcgtctacatgcgg
cagatcgaccagatggtcggcctgctctga
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