Sorex fumeus (smoky shrew): 130037633
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Entry
130037633 CDS
T10594
Symbol
EXOSC7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130037633 (EXOSC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfum03019
]
130037633 (EXOSC7)
Messenger RNA biogenesis [BR:
sfum03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
130037633 (EXOSC7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
130037633 (EXOSC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
130037633
NCBI-ProteinID:
XP_055985501
LinkDB
All DBs
Position
Unknown
AA seq
291 aa
AA seq
DB search
MASVALSEAEKVYIVHGVQEDLRVDGRGCEDYRCIEVETDVVSNTSGSARVKLGHTDILV
GVKAEMGTPKLEKPNEGYLEFFVDCSANATPEFEGRGGDDLGTEIANTLYRIFNSKNSVD
RKSLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDEEGSKDI
ELSDDPYDCIRLSVENVPCIVTLCKIGYRHVVDATLQEEACSLASLLVSVTSKGVVTCMR
KVGKGSLDPESIFEMMETGKRVGKVLHVSLQSLLHKEESLGAQRQKVGFLG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggtggcgctgagcgaggcggagaaggtgtacatcgtgcacggcgtccaggaa
gacctccgcgtggatggccgtggctgtgaggactatcggtgcatcgaggtggaaaccgac
gtggtgtccaacaccagtgggtctgccagggtcaaactgggtcacacagacatcttggtg
ggagtgaaagcagaaatggggacccccaagctggagaaaccaaacgaaggctacttggag
ttctttgtcgactgttctgccaacgccacccctgaatttgaaggtcgaggaggtgatgac
cttggcacagagattgctaacaccctctaccggatattcaacagcaagaacagcgttgac
cggaagtccctctgcatcagtcctcgggagcactgctgggttctctatgtggacgtgcta
ctgctggaatgtggtgggaatctgtttgatgccatctccattgcggtcaaggctgctctt
ttcaatacaaggataccaagagtccgtgttctggaagatgaagaggggtcaaaagatatt
gaattgtcagacgacccttatgactgcatccgactgagtgtggagaatgtcccctgcatt
gtcaccctgtgcaagatcggctatcggcatgtggtagatgctacgctgcaggaggaggcc
tgctccttggccagcctgctggtgtccgtgaccagcaaaggagtcgtgacgtgcatgagg
aaagtggggaagggcagtctggacccagagagcatcttcgagatgatggagactggcaag
cgagtgggcaaggtgctgcacgtgtccctacagagcttgctgcacaaagaagagagcctg
ggcgcccagagacagaaagtcgggttcctggggtga
DBGET
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