Sorex fumeus (smoky shrew): 130037732
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Entry
130037732 CDS
T10594
Symbol
BHLHE40
Name
(RefSeq) class E basic helix-loop-helix protein 40
KO
K03729
class B basic helix-loop-helix protein 2
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
130037732 (BHLHE40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfum03000
]
130037732 (BHLHE40)
Transcription factors [BR:
sfum03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
130037732 (BHLHE40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
Oscp1
Motif
Other DBs
NCBI-GeneID:
130037732
NCBI-ProteinID:
XP_055985630
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MERIPGAQPPPAGPEPGDLPGMDFAHMYQVYKSRRGIKRGDDSKETYKLPHRLIEKKRRD
RINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTNLIDQQQQRIIALQSDLQ
TGELSGRSIDAGQEMFCSGFQTCAREVLQYLAKHENARDLKSSQLVTHLHRAVSELLQGS
PSRKLAEAAPKGLDFKEKASPLARAAQGPGKNCVPVIQRTCAPSGGEQSGSDTDTDSGYG
GECEKGEPPCFRADAGRRPPAGERFGAIKQESEEPPAKRSRVQRADEEGRFAGGDLLGAP
FLGPHPHQPPFCLPFYLIPPSATAYLPMLEKCWYPTSVPLLYPGLNASAAALSSFMGADK
VSAPLLVPQRLPSPLPAHPALDSSALLQALKQIPPLSLETKD
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggagcggatccccggcgcgcagccgccccccgccggccccgagcccggagacctgccc
gggatggatttcgcccacatgtaccaggtgtacaagtcgcgacgcggcatcaagcgcggc
gacgacagcaaggagacctacaagctgccgcaccggctcatcgagaagaagaggcgcgac
cgcatcaacgagtgcatcgcgcagctcaaggacctcctgcccgaacacctcaaacttaca
accctgggccacttggagaaggccgtggttctcgagctcaccttgaagcatgtgaaggcg
ctgaccaacctcattgaccagcagcagcagagaatcatcgccctgcagagtgacctgcag
accggggagctgtctgggaggagcatcgacgcaggtcaggagatgttctgctcagggttc
cagacgtgcgcccgggaagtgctgcagtacctggccaagcacgagaacgcccgggacctg
aagtcctcgcagctggtcacccacctgcaccgcgccgtgtccgagctcctgcagggcagc
ccctcccggaagctggccgaggccgcgcccaaaggcctggacttcaaggagaaggccagc
cccctggcccgggccgcccagggccccggcaagaactgcgtgcccgtcatccagcggact
tgtgcgccgtcgggcggggagcagagcggcagcgacacggacacggatagcggctacggg
ggcgagtgcgagaagggggagccgccctgcttcagggccgacgccggccgcaggccccca
gcgggcgagcgcttcggggccatcaagcaggagtccgaggagccccccgccaaaaggagc
cgcgtgcagcgtgccgacgaagagggccgcttcgccgggggcgacctgctgggcgccccc
ttcctgggcccccacccgcaccagccccccttctgcctgcccttctatctcatccccccc
tcggccaccgcctacctgcccatgctggagaagtgctggtaccccacgtcggtgcccctg
ctctaccccggcctcaacgcgtccgccgccgcactcagcagcttcatgggcgccgacaag
gtctcggcgcccctgctggtgccccagagactcccctcgcccctgccggcccacccggcc
ctcgactcctccgccctgctccaggccctgaagcagatcccccccttaagcttggaaacc
aaagactga
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