Sorex fumeus (smoky shrew): 130038050
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Entry
130038050 CDS
T10594
Symbol
APEX2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfum03400
]
130038050 (APEX2)
Enzymes [BR:
sfum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
130038050 (APEX2)
DNA repair and recombination proteins [BR:
sfum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
130038050 (APEX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-GeneID:
130038050
NCBI-ProteinID:
XP_055985958
LinkDB
All DBs
Position
Unknown
AA seq
518 aa
AA seq
DB search
MLRIVSWNINGIRSPLPGVFNEDPGNCTTMALGRILDKLDADIICLQETRVTRDALTEPL
AIIEGYNSYFSFSRNRSGYSGVATFCKDSATPVAAEEGLSGLLASQSENVGCYGNMDAFT
EEELRDLDSEGRALLTQHKIRTQEGKEKTLILINVYCPHADPGKPERLAFKIRFYHLLQI
RAEALLAAGSHVIILGDLNTAHRSIDHWDSGNLECFEEDPGRKWMNKLLSTLGCQSGSHR
IGLFIDSYRYFQPEQEGAFTCWSTITGARHFNYGSRLDYVLGDRNLVIDTFKDSFLLPEV
MGSDHCPVGAVMSVSPVPAKQCPSLCTCFLPEFAGTQLKILNFLVRLDQDPVFKQSMLPL
FNQTQTKTHQSKARVRLTRPRQSQVDSSKGQKNLKSYFLPSSRCSQASPNLELPSLSSFV
TPKMQKEAMMDKVGEGQTKVSDSKNKDEKELQISFWKSVLGGPLPMPLCGGHKEPCVRRI
VKKPGPNLGRHFYICARPQGPPTDPSSRCNFFLWSRPT
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgtatagtgagctggaatatcaacggaattcggagccctttgccaggagttttt
aacgaggatcccggcaactgtactactatggctttgggacgcatattggataaactggat
gctgatataatttgtctccaggaaaccagagtgaccagggatgcgctgacagagcccttg
gcaatcattgaaggttataactcttatttcagcttcagccgcaacagaagtggctattct
ggtgtagccaccttctgtaaggacagtgctacccctgtggctgctgaagaaggcctgagt
ggcttacttgccagccagagtgagaatgtgggttgctatggaaacatggatgcattcact
gaagaggagcttcgagacctggatagcgaaggtcgggccctccttacacagcacaagatt
cgcacacaggaaggaaaggaaaagaccttgatcttaatcaatgtgtactgccctcatgca
gaccctgggaaacctgaacgcctggcctttaagatacgcttctatcacttactacagatc
cgagcagaagccctcctggcagctggcagccacgtgattattttgggtgacctgaataca
gcccatcgttccattgaccactgggattcaggtaacctggaatgctttgaagaggatcca
gggcgcaaatggatgaataagttgctcagtaccctagggtgccagtctgggtcccaccgc
atagggcttttcattgatagctaccgttacttccagccagagcaagagggtgcttttacc
tgctggtcaaccatcactggcgcccgacatttcaactatggctcccggcttgactatgta
ctgggggacaggaacttggtgatagacactttcaaggattcattcctgctgcctgaggtt
atgggctctgaccactgccctgtaggtgcggtcatgagtgtatcccctgtgcctgcaaaa
cagtgcccatctctttgtacctgtttccttcctgaatttgcaggtacccagctcaagatc
cttaactttcttgttcgtctggatcaagatcctgtgtttaagcagtcgatgctgccactc
ttcaatcaaacacagacaaagacacaccaaagtaaagctcgtgtgcgattaaccaggcct
cgacaaagtcaggttgactccagcaaaggccagaaaaacttgaagagctattttctgcca
tcttctcgctgttcccaagcttctcctaacttggaacttccttccttgagttcctttgtg
actccaaagatgcagaaagaggcgatgatggacaaagttggggagggacagaccaaggta
tcagattcaaagaacaaggatgagaaggagttacagatctcattctggaaatctgttctt
ggggggcccttgcccatgcccctctgtgggggtcacaaggagccatgtgtgaggagaatt
gtgaagaaaccaggaccaaatttgggtcgccacttctacatttgtgctaggccccagggt
cctcccactgacccctcctcccgttgcaacttctttctctggagtaggcctacctaa
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