Sorex fumeus (smoky shrew): 130038165
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Entry
130038165 CDS
T10594
Symbol
EDA
Name
(RefSeq) ectodysplasin-A isoform X1
KO
K05480
ectodysplasin-A
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04060
Cytokine-cytokine receptor interaction
sfum04064
NF-kappa B signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
130038165 (EDA)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
130038165 (EDA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
sfum04052
]
130038165 (EDA)
Cytokines and neuropeptides [BR:
sfum04052
]
Cytokines
Tumor necrosis fators
130038165 (EDA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNF
Collagen
Motif
Other DBs
NCBI-GeneID:
130038165
NCBI-ProteinID:
XP_055986070
LinkDB
All DBs
Position
Unknown
AA seq
391 aa
AA seq
DB search
MGYPEVEHREPLPAAARRERGSQGCGCRGAPARSGEGNSCRLFLGFFGLSLALHLLTLCC
YLELRSELRRERGAESRLGGPSTPGTSGTLTGPGGLDADGPITRHFGQSSPQQQPMEPGE
IIRPQESQDGHQMALLNFFFPEEKSFTEEESRRVHRNKRSKSSEGTDGPVKNKKKGKKAG
PPGPNGPPGPPGPPGPQGPPGIPGIPGIPGTTVMGPPGPPGPPGPQGPPGLQGPSGAADK
TGTRENQPAVVHLQGQGSAIQVKNDLSGGVLNDWSRITMNPKVFKLHPRSGELEVLVDGT
YFIYSQVEVYYINFTDFASYEVVVDEKPFLQCTRSIETGKTNYNTCYTAGVCLLKARQKI
AVKMVHADISINMSKHTTFFGAIRLGEAPAS
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgggctaccccgaggtggagcatagggaacccctgcccgcggcagcgaggcgggaacgg
ggaagccagggctgcggctgtcgcggggcccctgcccggtctggtgaagggaacagctgc
aggctcttcctgggtttctttggcctctctctggccctccacctgctgacgttgtgctgc
tacctagagttgcgctccgagttgcggcgggaacgaggagccgagtcccgcctgggcggc
cccagcacccctggcacctctggcaccctaaccggtcccggtggcctcgacgctgacggt
cccatcacccgccactttggacagtcgtcccctcagcagcagccaatggagccgggagaa
atcatacgtccccaggagtcccaggacgggcaccagatggcccttttgaatttcttcttc
cctgaagaaaagtcattcactgaagaagagagtaggcgtgttcaccggaataaaagaagc
aaaagcagtgaaggaacagatggaccagttaaaaacaagaaaaagggaaaaaaggcagga
cctcctgggcccaatggccccccaggacctccaggacctccaggaccccaaggaccccca
gggattccagggattcctgggattccagggacaactgtaatgggacctcctggccctcca
ggtcctcctggacctcaaggaccccctggtctccaaggaccgtctggtgctgctgataaa
actggaactagagaaaaccagccagctgtggtgcacctacagggccaggggtcagcgatt
caagtcaagaatgatctttcaggtggagttctcaatgactggtctcgcatcactatgaac
cccaaggtgtttaagctgcatccccgaagtggggagctggaggtactggtggacggcacc
tacttcatctatagtcaggtagaagtctactacatcaacttcactgactttgccagctat
gaggtggtggttgatgagaagcccttcctgcagtgtacccgaagtattgaaacaggaaag
accaactacaacacttgttacaccgcaggcgtctgcctcctcaaagcccggcagaagatt
gctgtgaagatggtgcatgccgacatctcgatcaatatgagcaagcacaccaccttcttt
ggggccataaggctgggcgaggcccctgcatcctag
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