KEGG   Sorex fumeus (smoky shrew): 130038365
Entry
130038365         CDS       T10594                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL2-like
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
sfum  Sorex fumeus (smoky shrew)
Pathway
sfum03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:sfum00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    130038365
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sfum01009]
    130038365
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sfum03021]
    130038365
Protein phosphatases and associated proteins [BR:sfum01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     130038365
Transcription machinery [BR:sfum03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     130038365
    Little elongation complex (LEC)
     130038365
SSDB
Motif
Pfam: ELL Occludin_ELL UBR1-like_wing
Other DBs
NCBI-GeneID: 130038365
NCBI-ProteinID: XP_055986226
LinkDB
Position
Unknown
AA seq 642 aa
MFTKVFSCLNLDPYRYHFMENSEEMDQMLYQDGQVEMEAANGMGPYQDSFSVLPMNPTGE
VSQPIDYYGNLENRLCPQASHQFQGHTGPIQQPPINPPTQECNFNLQNSSDSILRYSSEY
SHLYHRSQNAPYYGPSESSCLPLMSETPMVCGKNDTYQNTDIKAQEEEVPYKQQKNIRKT
RAPTWKDSQSIIDIVPERKKTTPMNPAYAIRKSRITNSVYKWPFRDRIIHLLALKNYRKT
DLLVRLQKDGIPENDKNTLGRILQEVAILNTDFSYSLKDSVFKEIRKDWPGYNNLDRQSL
ELILANKAESFQKSSSNTQPQFSSRDGTLSFSQDQSSNPGFIDPLRRRKVRISHLATASR
PTLNRENSTLIRPPPSATTVSSVASPELTATIPISNSMPVASSSASNGTAQGLGTQHHTF
RQKSRISESQVKTTNLKMLASSSFAAKKRKSVRNPCLRSINKFKRMFLKYRVKNRMCSTT
TMKKEKTETKPQREDTEMNPAEEAPTACSASATAPALPDYLTKYVTVDSPEQREHFVQDF
YAEYDEYQTLHAKMVDLSRIFFQLDAERNQLTPGSKEYQDIDEKVILEYQKMIELNPNFK
EEKRRCLYLYDKLSHIKRLVSEYDQQNLMETSSSSSGSCSPE
NT seq 1929 nt   +upstreamnt  +downstreamnt
atgtttactaaagtattttcctgtttgaaccttgatccttacagatatcactttatggag
aactctgaagaaatggaccaaatgctctatcaggatggacaggtggaaatggaggcagcc
aatggtatggggccatatcaggacagtttctcagtattgcccatgaaccctactggagaa
gtcagccagccaattgactattatggaaacctcgagaaccgattgtgtcctcaagcttcc
catcaatttcaaggacatacaggccccatccagcagcctccaatcaacccacccactcaa
gaatgcaacttcaatttgcaaaactcgagtgactctatattgagatactcaagtgaatac
agtcacttatatcatcgttcccaaaatgccccatattatggtccctcggaatcttcttgc
ctgcccttaatgtctgaaacaccgatggtgtgcgggaaaaatgacacttaccagaacaca
gacataaaggcccaggaagaagaggtaccctacaaacagcagaaaaatattagaaagaca
agagcgcccacttggaaagactctcaaagcatcatagatatagttccggagaggaaaaag
acaactcccatgaatcctgcatatgcgatccgaaagtcacgaattaccaacagtgtatac
aaatggccattcagagacagaataatccatctgttggcactgaagaactatagaaagact
gatctgctcgttcgacttcagaaagatggcattccagaaaatgacaagaacacccttggg
agaattctgcaagaagtagccattctaaacactgatttttcatatagcctaaaggactct
gtctttaaagagatcaggaaagactggcctggatacaataacctagacaggcagtcactg
gagttgatccttgccaacaaggcagagtcattccagaaatccagcagtaacacccagcca
caattttctagtagagatggcaccttatctttttcccaggatcaatcatccaatccaggt
tttattgatcctctaaggagaaggaaagtcagaatatctcacctagcaacggcaagccgg
ccaacactaaacagagaaaactccactcttattcgtcctccaccatctgcaacaactgtg
agctctgtcgcatcaccagaactcacagctaccattcctatttcaaattcaatgcctgta
gcttccagctctgcttctaatggcactgcacaaggactgggcactcaacaccacaccttc
agacaaaagagtcgaatctctgagagtcaagtaaaaaccaccaatttgaaaatgttagcc
tcttcttcatttgccgcaaaaaagcgtaaaagtgtaagaaatccatgtttgagatctatt
aataaatttaaacgtatgtttttaaaatacagagtcaagaaccggatgtgcagtaccaca
acaatgaagaaagagaagacagaaacaaaaccccagagggaagacacggagatgaatcct
gctgaagaagctccgacagcttgcagtgcgtctgctacagcacctgcacttccagattat
ttgactaaatatgtcactgtagatagccctgagcagcgcgagcattttgtacaggacttt
tatgcagaatatgatgagtatcagaccttgcatgctaagatggtagatttatccagaata
ttttttcaactagatgcagaaagaaaccagctgactccaggctcaaaggagtatcaggat
attgatgaaaaagtaatactagagtaccaaaagatgatagagcttaaccccaattttaag
gaagaaaaacgtagatgcttgtatctgtatgacaagttatctcacattaaaagactagta
agtgagtatgatcaacaaaacctcatggaaaccagtagcagttctagtggaagttgttca
ccagagtaa

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