Sorex fumeus (smoky shrew): 130038391
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Entry
130038391 CDS
T10594
Symbol
GABRE
Name
(RefSeq) gamma-aminobutyric acid receptor subunit epsilon
KO
K05185
gamma-aminobutyric acid receptor subunit epsilon
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04080
Neuroactive ligand-receptor interaction
sfum04082
Neuroactive ligand signaling
sfum04519
Cadherin signaling
sfum04723
Retrograde endocannabinoid signaling
sfum04727
GABAergic synapse
sfum05032
Morphine addiction
sfum05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130038391 (GABRE)
04082 Neuroactive ligand signaling
130038391 (GABRE)
04519 Cadherin signaling
130038391 (GABRE)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
130038391 (GABRE)
04723 Retrograde endocannabinoid signaling
130038391 (GABRE)
09160 Human Diseases
09165 Substance dependence
05032 Morphine addiction
130038391 (GABRE)
05033 Nicotine addiction
130038391 (GABRE)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfum04040
]
130038391 (GABRE)
Ion channels [BR:
sfum04040
]
Ligand-gated channels
GABA-A
130038391 (GABRE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
130038391
NCBI-ProteinID:
XP_055986244
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MLAKVVRVLLLLTMILTAGIKAPHITSKIEPTAPNIVYGPMPKPPEEKKTSPEKKESYDF
TPVINKRMSEATRILDNMLANYDSSLRPGIGKEPTVVNFTFIIHSFGPLSVVNMEYTIDA
TFHQTWYDERLSFNGSFEDLLLNRHLVNQLWLPNIDIKNSKRIQDQGHDMNTRMARIYKN
GKVLHTTRMIIDIGCPMQLNKFPLDSHSCPLSFSSFFYPNSEVIFKWNKLDFNTTAAWKL
FEFELQGVTNTTEITDTEIGEYTVMTFYFHITRQLGFLTIHRYIPCSLSTMLSWLSFWIH
KDFSSARISLGITAILTLSTISSLIKRKVPNMTCGTVLDFYVATCFVFSFCSLLEFALIT
LVTYKRNKLHVPKIRHSRSFVRVHISARDSAYLRARARAATRLHLEGLLMDSDSSDTEGE
EQQRVEEWVEGGWERLACPRQVADYPDIAHRPASSCKWYQKFFCTFASCRGGIWQDGRIY
IHVYRLDAYSRIWFPLVFVIFNIVYWSGSDFSLRGAYQLLFSYRHLLRILGSKRMAREDQ
DL
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgttagcgaaagttgtgcgcgtgcttctgctcctgacaatgatcctgacagcggggata
aaagcaccacatattacatccaaaattgaacctactgctccaaatattgtctatggcccc
atgccaaagccccctgaggagaagaagacttcacctgagaaaaaagaatcttatgatttc
actcctgtcataaacaagagaatgtcagaagcaactagaatcctggacaacatgttggca
aactatgacagctcactgcggcctggcattggcaaggaacccactgtggtcaactttacg
ttcataatacattcatttggtccactctctgttgtaaacatggaatataccatcgacgcc
acctttcaccaaacttggtatgatgaacgcctcagttttaatggcagctttgaggacctt
cttttgaacaggcacttggtgaaccagttatggctcccaaacatcgatatcaaaaattct
aagaggatccaagatcaagggcatgacatgaacactcgtatggcccgcatctacaaaaat
ggcaaggtgctgcacacaactaggatgatcattgatattggatgcccaatgcaattgaac
aaatttccactggattctcactcttgccctctgtctttctctagttttttctatcctaat
agtgaggtgatctttaagtggaataagctagactttaataccactgctgcctggaagctg
ttcgagtttgagctccagggagtgaccaatacgactgaaatcaccgataccgagattggt
gaatacacagtaatgacgttttacttccatatcacccgccaactgggctttctgaccatc
caccgctatatcccttgttcattgtccacaatgctctcctggctttccttttggatccat
aaggatttttcttctgccaggatctctctggggattaccgctattctcactttgtccacg
ataagcagcttaatcaagaggaaagtacccaacatgacctgtggcactgtcttggatttc
tatgtcgccacttgcttcgttttttccttctgttctctgttggagtttgctctgattacc
ctcgtgacttacaaacgaaacaaactccatgttccaaaaattcgccattctcgttccttt
gtccgcgtacacatctcggcccgggacagtgcctatctccgcgcccgtgcccgtgccgcg
acccgactccatctcgaaggtttgctgatggattctgacagcagtgacaccgagggtgag
gagcagcagcgggtggaggaatgggtggagggagggtgggagcgcctggcttgccctaga
caggtggccgactatcctgacattgcccaccgccccgcgagctcctgcaagtggtaccag
aagttcttctgcaccttcgcctcctgccgtggtgggatatggcaggacggccgcatctat
attcatgtctaccgcctggatgcctactcgcggatttggttcccactggtcttcgtaatt
ttcaatattgtctactggtctggttctgacttcagccttcgaggcgcctatcaattgctc
ttctcttaccgacacctcctgaggatactgggcagcaagagaatggcccgggaggaccaa
gacctttag
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