Sorex fumeus (smoky shrew): 130038626
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Entry
130038626 CDS
T10594
Symbol
BTAF1
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
sfum Sorex fumeus (smoky shrew)
Brite
Transcription machinery [BR:
sfum03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
130038626 (BTAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130038626
NCBI-ProteinID:
XP_055986436
LinkDB
All DBs
Position
Unknown
AA seq
1849 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLIYLRSTNWDTRI
AAGQAVEAIVKNVPEWNPVPRTKQESASESAVEDLPTTDRLNFDRFDICRLLQHGASLLG
SAGAEFEVQDEKSGEVDPKERIARQRKLLQKKLGLNMGEAIGMSTEELFNDEDLDYNPTS
AALVNKQPTLQAAELIDSEFRTGMSNRQKNKAKRMAKLFAKQRSRDAVEANEKSNDSTDG
EPEEKRRKIANVVINQPANDSKVFIDNISDSSSLIEETNEWPLESFCEELCNDLFNPSWE
VRHGAGTGLREILKAHGKSGGKMGDSTLEEMIQQHQEWLEDLVIRLLCVFALDRFGDFVS
DEVVAPVRETCAQTLGVVLKHMNETGVHKTVDVLLKLLTQEQWEVRHGGLLGIKYALAVR
QDVINTLLPKVLTRIIEGLQDLDDDVRAVAAASLVPVVESLVYLQTQKVPFIINTLWDAL
LELDDLTASTNSIMTLLSSLLTYPQVQQCSIQQSLTVLVPRVWPFLHHTISSVRRAALET
LFTLLSTQDQNSSSWLIPILSDMLRHIFQFCVLESNQEILDLIHKVWMELLNKASVQYVV
AAACPWMGAWLCLMMQPSHLPIDLNMLLEVKARAKEKTGGKVRQGQSQSKEVLQEYIAGA
DTIMEDPATRDFVVMRARMMAAKLLGALCCCICDPSVNVVTQEIKPAESLGQLLLFHLNS
KSALQRISVALVVCEWAALQKECKAVTLAVQPRLLDILSEHLYYDEIAVPFTRMQNECKQ
LISSLADAHIEVGNRVNNSVFTIDQANDLVTTVFNEVTSSFNLNPQVLQQLDSKRQQVQM
TVTETNQEWQVLQLRVHTFAACAVVSLQQLPEKLNPIIKPLMETIKKEDNTLVQNYAAQC
IAKLLQQCTTRTPCPNSKIIKNLCSSLCVDPYLTPCVTCPVPTQSGQENSKGSNSEKDGM
HHTVTKHRGIITLYRHQKAAFAITSRRGPTPKAVKAQIADLPAGSSGNILVELDEAQKPY
LVQRRGAEFALTTIVKHFGGEMAVKLPHLWDAMVGPLRNTIDINNFDGKSLLEKGDGPAQ
ELVNSLQVFEIAAASMDSELHPLLVQHLPHLYMCLQYPSTAVRHMAARCVGVMSKIATME
TMNIFLEKVLPWLGAIDDNIKQEGAIEALACVMEQLDVGIVPYIVLLVVPVLGRMSDQTD
SVRFMATQCFATLIRLMPLEAGIPDPPNMSEELIQLKAKERHFLEQLLDGKKLENYKIPV
PINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQEYARSK
LAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKRHNLIV
ASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNV
LELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMDALHRQVLPFL
LRRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAKCDVDETVSSAALSEDTEKP
KLKATGHVFQALQYLRKLCNHPALVLTPQHPEFKSTTEKLAVQNSSLHDIQHAPKLSALK
QLLLDCGLGNGSTSESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGS
IPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRA
HRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTL
DKDGKAEKADASTSGRASMKSILENLSDLWDQEQYDSEYSLENFMHSLK
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtccaggcttgaccgtctttttatcttactggatactggcactactccagtt
acaagaaaagctgctgcacagcaacttggagaagtggtgaagcttcatccacatgaatta
aataatctgttatctaaagtattgatatatttacggagtacaaattgggatacccggatt
gcagcaggacaagctgttgaagctatagtgaaaaatgtacctgagtggaatccagtgcca
agaaccaaacaagaatctgcttcagaaagtgctgtggaagatttacctactacagatcgg
ttgaattttgacagatttgatatatgtagattgctacaacatggggcatcacttttggga
tctgctggtgcagaatttgaagtgcaagatgaaaaatcaggagaagtggatcctaaagag
aggatagcacgccaacgaaaactattgcagaagaaacttggccttaatatgggagaagcc
attggaatgagtactgaggaactcttcaatgatgaagatttggattacaacccgacttct
gcagcccttgtaaacaaacagcctactctccaggcagctgaattgattgactcagaattt
cgaacaggaatgagcaatagacagaagaacaaagctaaaagaatggccaagttatttgca
aaacagaggtctagggatgcagtggaagcgaatgagaagagcaatgatagcactgatggt
gaaccagaagaaaagagacgaaaaatagcaaatgttgttattaatcagcctgcaaatgat
tccaaagtcttcattgataatatttcagacagttcttctttaattgaagagacaaatgaa
tggcctctggagagcttttgtgaagaactttgcaatgacctttttaatccttcatgggag
gttcgacatggtgcaggcactggacttagagaaatccttaaagctcatgggaaaagtggt
ggtaaaatgggagatagcactttagaagagatgatacagcagcatcaagagtggttggaa
gacttggttattagactcctatgtgtttttgcattagatagatttggagattttgtttct
gatgaagttgtggcaccagttcgtgaaacttgtgctcaaacattaggtgtggtgttaaaa
cacatgaatgaaacaggagttcataagactgtggatgtgctacttaaattactgacacaa
gagcaatgggaagttagacatggtggtttgctgggaataaaatatgctttagcagttcgt
caggatgtaattaatactttattgcctaaagttttaactagaataatagaaggactccag
gatcttgatgatgatgtcagagctgttgcagcagcatctttagtacctgtggtagaaagt
cttgtgtatcttcagacacaaaaggtgcccttcattataaatacactgtgggatgctctt
ctggaactagatgacctaacagcttcaacaaatagtattatgactcttctttcatcttta
ttaacttatcctcaggttcaacaatgcagtattcaacagtcacttacagttttggtacca
cgtgtttggccttttttgcatcacactatatcatcagtacgaagagcagcattggaaact
ctttttacattattatcaacccaggaccagaattcttcatcttggcttattcctatcctg
tctgatatgctgcgacacatttttcaattttgtgttttagaaagcaatcaggaaattctg
gacctcattcacaaggtgtggatggaattgttgaacaaagcttcagttcagtatgtggta
gcagctgcttgtccttggatgggtgcttggctttgtttaatgatgcagccttctcattta
cctattgatttaaatatgttactggaagtaaaagctagagccaaggaaaagactggtggt
aaggtgcgccaaggccaaagccagagtaaagaggtccttcaggagtacattgcaggtgca
gataccattatggaagatcctgccactagggattttgtggtcatgagagccagaatgatg
gcagccaagttattgggagcactttgttgctgtatttgtgacccaagtgtaaatgtggta
acccaggaaattaaaccagctgaatcccttggtcagttactactattccatttgaactcc
aaatctgccttacagagaattagtgttgctttggtagtctgtgaatgggctgccttacaa
aaggagtgtaaagctgttaccctagctgtgcagccacgtttacttgatatcctttcagaa
catttgtactatgacgaaattgctgttccattcacacgaatgcagaatgagtgtaaacag
cttatttcatcattagctgatgcacatattgaagttggtaatagagtaaacaacagtgtt
tttacaatcgatcaagctaatgacctggtcactactgtttttaatgaagtcacatcatct
ttcaatttaaatcctcaagtgttacagcagttagatagtaaacgacaacaggtccagatg
acagttacagagaccaaccaggagtggcaagtgttacagttgagagttcatacttttgct
gcatgtgcagttgtgagcttgcagcaacttccagagaaattaaatcctatcataaaacca
ttaatggaaacaattaaaaaagaagataatacactggtgcaaaactatgccgctcagtgc
atagcgaaactacttcagcagtgcacaacaaggacaccttgccccaattcaaaaattatc
aaaaacctctgtagctctctttgtgtcgacccctatctaactccctgcgttacatgtcca
gtaccaacacaaagtggccaggaaaattctaaaggctctaactccgaaaaagatggaatg
caccatacagtcaccaaacacagaggtataattacactctataggcatcagaaagctgct
ttcgctattacaagtagacgaggtcctacccccaaagctgtaaaagctcaaatagcagat
cttcctgcaggaagtagtggaaatatccttgttgaacttgatgaggcccagaagccctat
ctggtacaacggagaggagctgagtttgccttgactactatagtgaaacattttggtggt
gaaatggcagtgaagttgccacatctttgggatgctatggttggaccattaagaaataca
atcgacataaataattttgatggaaagtccctccttgaaaagggtgatggccctgcccaa
gaattagtgaattctctccaagtttttgaaatagcagcagcttcgatggattctgaactt
catcctttgttggtacagcatttgcctcatctatatatgtgtcttcagtaccccagcact
gcagtaagacacatggctgctcgttgtgtaggtgttatgagcaaaatagctaccatggaa
acaatgaacatttttttggagaaggttcttccttggctgggagcaattgatgacaatatc
aagcaagagggggcaattgaagcacttgcatgtgtaatggaacaactggatgttggtatt
gttccatatattgtgcttttagttgtacctgtgttgggaagaatgagtgatcagacagac
agtgtaagatttatggctacgcagtgctttgcaacacttattagactgatgcctcttgag
gcaggtattccagatcctccaaatatgtcagaagaattaatccaattgaaagccaaggag
cgacactttttggaacaattgttagatgggaagaaattagaaaattataaaattccagta
ccaatcaatgctgaattaagaaaatatcagcaggatggcgttaactggttagcatttctt
aataagtataaacttcatggaattctttgtgatgatatgggattaggaaaaactttacag
tccatctgcatcctagcaggagatcattgtcacagggcccaggaatatgcaagatcaaaa
ctggcagaatgtatgccacttccttcattggtggtctgtccaccaacattgacaggacat
tgggtggatgaagtaggtaaattttgctccagggaatatctcaatccattgcactatact
ggacctcctactgaaagaataaggttacaacatcaagtaaaaagacacaatctaatagtg
gcttcatatgacgttgtgaggaatgacatagatttctttagaaatattaagtttaactac
tgtatccttgatgaaggccatgtcatcaaaaatggaaaaacaaaattgtcaaaagcagta
aagcaactgactgcgaattatagaattattctctctgggacaccaattcagaacaacgtt
ttggagctctggtcattatttgatttcctaatgccaggatttttggggactgaacgccag
tttgctgctcgatatggtaaaccaatattagcaagtagagatgctcgaagttccagtcgt
gaacaagaagcaggtgttcttgcaatggatgcgctgcaccgccaggttctaccatttctt
ttgagaagaatgaaagaggacgttttgcaggatcttcctcccaaaatcattcaagactat
tactgtactcttagtcctctccaggttcagctttatgaagattttgccaagtctcgtgcc
aaatgtgatgttgatgaaacagtttcttcagctgcactttctgaagacactgaaaaacca
aagcttaaagctacaggccatgtatttcaggcattacagtacttacgtaaactctgcaac
catccagcattagtcttaacacctcaacatccagaattcaagagtactactgaaaaattg
gcagttcaaaattcttctcttcatgatattcaacatgcccctaaactttcagcattgaaa
cagttgctgttggattgtggtttgggaaatggcagcacttcagagagtggtacagagtct
gttgtggcccagcacagaatattgatcttctgtcagcttaaaagcatgcttgatatagtg
gaacatgatcttctcaaacctcacttaccctctgtcacttatttgagattagatggcagc
ataccacctggccagaggcattccattgtttcacgatttaacaatgatccatccatagat
gttctgttacttacaactcacgttggtggcctggggctaaacttaacaggcgctgacaca
gtggtatttgtggagcatgactggaatcccatgcgtgatctacaagcgatggatcgggcc
catcgcattgggcagaaacgagtggttaatgtgtatcgattgataaccagaggaacattg
gaagagaaaataatgggtttgcaaaaattcaagatgaacatagcgaatactgttattagc
caagagaattctagtttgcagagtatgggtactgatcagcttcttgaccttttcactctt
gataaggatggcaaagcagaaaaagctgatgcctctacttctgggagagcaagcatgaaa
tcaattcttgaaaacctgagcgatctttgggatcaagaacaatatgattcggagtacagc
ctagaaaattttatgcattctttaaagtaa
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integrated database retrieval system
