Sorex fumeus (smoky shrew): 130038900
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Entry
130038900 CDS
T10594
Symbol
NUP133
Name
(RefSeq) nuclear pore complex protein Nup133 isoform X1
KO
K14300
nuclear pore complex protein Nup133
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03013
Nucleocytoplasmic transport
sfum05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130038900 (NUP133)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
130038900 (NUP133)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfum03019
]
130038900 (NUP133)
03036 Chromosome and associated proteins [BR:
sfum03036
]
130038900 (NUP133)
Messenger RNA biogenesis [BR:
sfum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130038900 (NUP133)
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
130038900 (NUP133)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
130038900
NCBI-ProteinID:
XP_055986675
LinkDB
All DBs
Position
Unknown
AA seq
1156 aa
AA seq
DB search
MYPAVSSPRTPGPGSRRGPLGGVGPGSTPRATSRKGLSLGSAISSPVLFSPVGRRSSLSS
RGTPTRLFPYHSVTESINYDVKTFGSSLPVKVMEVLTLSDVDDQLSVRIDEGGWACLVYK
EKLLIWKIALSPITKLSVCKELQLPPSDFHWSADLVALTYSAASGEAHSTQAVAVMVATR
EGSIRYWPSLGGEDTYTETSVDLGGDKTCSFLTAVQGGSFILSSSGGQLIRLMPENLGKI
QQHILPQGQGMLSGIGRRVSSLLGILSSSSDLTLSSVLWDRTKSNFYSLTSSNISKWELD
DSSERQVHSWDINRALKENIADAIWGSESNYEAIKEGVNIQYLDLKQSCDGLLILAAAWH
PADNPCLVYYSLITVEDTGCQIPDSVTVEVTQYNPPFQSDDLIMCRLLIPDFTSQTAYLY
TESAVYVCSTGTGKFSLPQEKIVFNTQGDSILGAGSCGGVPILFSRNSGLVSVTSRENVS
ILAEDIEDSLASSVAGPSNENMVFETSIRNEVIAQEDKTKLLKAAFLQYCRKDLGHAQMM
VDELFSSNSDLDSDCELDRVVTQISVDLVDDYPASDPRWAESVPEEAPGFSNTSLIILHQ
LEDKMKAHSFLMDFIHQVGLFDRLRTFPVRGVPMTTPLLLCEHAEKLSAAIVLKNHHSQL
PDLVNTAILIALNKRDCEVPSNLTPADVFFREVSQVDTICECLLEHEEQVLKDALLESVE
WAEVVINVNNILKDMLQAASHYRQNKISLYRREEPREKEPEYVPWTATSGPAGIRTAIMR
QHGIVLKMVYPQADSNLRNVLTEQLVSLIDCFLDGYVSQLKSLDKSSDQERYNSLEVEYQ
QKRSDLLSPLLTLGQYPWAASLAEKYCDFDILVQMCEQTDNQTRLQRYMTQFADQNFSDF
LFRWYLEKGKRGKLLSQPISQHGQLANFLQAHEHLSWLHEINSQELEKAHATLLGLANIE
TRYFAKKKTLLGLSKLAALASEFSEDTLQEKIEEMAEQERFLLHQETLPEQLLAEKQLSL
SAMPVLTAQQLIGLYICEENRRANEYDFKKALDLLEYIDEEEDVNINDLKLEILCKALQR
DNWSSSDGKDDPIEVSKDSIFVKILEKLLKDGIQLSEYLPEVKDILQADQLGSLKSNSYF
EFVLKANYEYYVQGQM
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgtaccccgccgtctcctctccgcggaccccggggcccggctcccgaaggggccccctg
ggtggagtcgggcctggctccacacccagggcgactagccggaagggtctgtccctgggg
tctgccatcagctctcccgtgctcttctcgcccgtcggccggcggagctcgctgagctcg
cggggaacacctacacgactattcccataccactctgtaacggagtctataaactacgat
gtgaaaacatttggatcttctctgcctgttaaagtaatggaagttctaacattgtctgat
gttgatgatcaactgagtgttcgcatcgatgaaggtggatgggcttgtctggtctacaaa
gagaaacttcttatttggaagattgctctgtcacctattacgaagttatcagtttgcaaa
gagcttcagctgccccctagtgatttccactggagtgctgatttggtggctctcacttac
tctgctgcctcaggtgaagcacattctactcaggctgttgctgtcatggtcgccactaga
gaaggatccatccgctattggccaagtcttggaggtgaagacacctacacagagacctct
gtagatttgggtggtgataagacttgcagcttcctaacagcagtacagggaggaagtttt
attttgtcctcatctggaggccaactgattcgactgatgcctgaaaatttaggaaagatt
cagcagcatatcttacctcaagggcaaggaatgctttcaggaattggtcggcgggtttct
tctcttttgggaattttatcctctagtagcgatctcacactttcaagtgtcctctgggat
agaacaaaatcaaacttttatagcttgacaagttcaaacatcagtaaatgggaattagat
gattcttcagaaagacaagtacatagttgggatataaatagagccctgaaggaaaacatt
gctgatgctatttggggatctgaaagtaactatgaagctattaaagaaggggtcaacatt
cagtatttggatttaaagcagagctgtgatggacttctgattttggcagcagcatggcac
ccggcagataatccctgcctcgtctattattctttgataacagtagaagatactggctgc
caaatacctgattcagttacagtggaagtcactcagtataacccaccttttcagtctgat
gacttgattatgtgtcgattgctgatcccagactttacaagtcagactgcctatctgtat
actgagagtgctgtctatgtgtgctccacaggaactggaaagttttctcttcctcaggag
aaaattgtcttcaatacacaaggagatagtattttaggagctggttcttgtggtggtgtt
cctatccttttttctagaaacagtggattggtgtctgtaacttcaagggaaaacgtgtcc
attttagcagaggatattgaagattccctagcatcttcagttgctggaccaagcaatgag
aatatggtttttgagacgtctataaggaatgaagtgatagcccaggaagataaaaccaaa
ttgctaaaagctgcttttctgcaatattgcagaaaagatttaggtcatgctcaaatgatg
gttgatgagcttttttcttcaaactctgatttggattctgattgtgaattagacagagtt
gttacccaaatcagtgtggacctagtggatgactacccagcttctgatccacggtgggct
gagtctgtccctgaggaagcaccaggattcagcaatacgtctctgattattcttcatcag
ctagaagacaagatgaaagcccattctttccttatggacttcattcaccaagttggatta
tttgatcgtctccgcacttttccagtgaggggggtgccaatgacaactccactgttgctc
tgtgagcatgccgagaagttgtcagcagccattgttcttaagaaccaccattctcaactt
cctgacctggtaaacacagcaatattgattgccttaaacaagagggattgtgaagtccca
tccaacctgactccagcagatgtatttttcagagaggtctcccaggtagatacaatttgt
gaatgtttactggagcatgaggaacaagtcttaaaggatgcattattggaatctgtcgaa
tgggctgaagtggtgatcaacgtgaacaatattctcaaggacatgctgcaggctgctagt
cattatcgacaaaataaaatttccttgtatagaagagaagaaccacgagaaaaagaacca
gaatacgttccttggacagcaacaagtggccctgctggcatccgaacagcaataatgcgc
cagcatggtattgtcctgaaaatggtttatcctcaggcagacagtaacctccgaaacgtt
ctgacagagcagctagtatcactcatcgattgtttcctggatggttatgtttctcagctt
aagtctctggacaaatccagtgaccaagaaagatacaatagtctggaagtggaataccag
cagaaaagatcagatctcttatctccacttctcacactaggccagtatccgtgggctgct
tctttagcagaaaaatattgtgactttgatatcttggtacaaatgtgtgagcagactgat
aaccagactagactccaacgctacatgacacaatttgcagatcagaatttttcagacttt
ctctttcgctggtatctggagaaggggaagcgagggaaattattatcccagcctatttct
cagcatggacagttggcaaattttttgcaagctcatgaacatctcagctggttgcatgaa
attaacagccaagaattagaaaaggctcatgcaacacttctgggtttagcaaatattgaa
actcgttactttgcaaagaaaaaaacccttcttggtttgagtaaattagctgcattagct
tccgagttttcagaagatacattgcaagaaaaaattgaagaaatggctgaacaggagcgc
ttcctgctgcaccaggagacccttcctgaacagttgctggcagagaaacagctgagtctc
agtgcaatgccagttttgactgcacagcaacttattggtctatatatctgtgaagaaaac
agaagagctaatgagtatgatttcaagaaagctttggatttactggaatatattgatgag
gaggaagatgtaaatataaatgatctaaaactggaaattctttgcaaagctcttcagaga
gataactggtccagttcagatggcaaagatgatccgattgaagtatctaaagacagtata
tttgtgaaaatcttagagaaacttttaaaagatggcatacagctcagtgaatacctgcca
gaggtgaaagacatactacaagcagatcagcttggaagcttaaagtctaattcttacttt
gagtttgttttgaaagctaattatgaatattatgttcagggacaaatgtaa
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integrated database retrieval system
