Sorex fumeus (smoky shrew): 130038939
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Entry
130038939 CDS
T10594
Symbol
VCPIP1
Name
(RefSeq) deubiquitinating protein VCPIP1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sfum01002
]
130038939 (VCPIP1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfum04121
]
130038939 (VCPIP1)
Enzymes [BR:
sfum01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130038939 (VCPIP1)
Peptidases and inhibitors [BR:
sfum01002
]
Cysteine peptidases
Family C64
130038939 (VCPIP1)
Ubiquitin system [BR:
sfum04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
130038939 (VCPIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
Motif
Other DBs
NCBI-GeneID:
130038939
NCBI-ProteinID:
XP_055986768
LinkDB
All DBs
Position
Unknown
AA seq
1219 aa
AA seq
DB search
MSQPPPPPPLPPPPPPPEAPQTPPPLAAAAAAAPGGLSKRRDRRILSGSCPDPKCQARLF
FPASGSVSIECTECGQRHEQQQLLGVEEVTDPDVVLHNLLRNALLGVTGAPKKNTELVKV
MGLSNYHCKLLSPILARYGMDKQTGRAKLLRDMNQGELFDCALLGDRAFLIEPEHVNTVG
YGKDRSGSLLYLHDTLEDIKRANKSQECLIPVHVDGDGHCLVHAVSRALVGRELFWHALR
ENLKQHFQQHLAQYQALFHDFIDAAEWEDIINECDPLFVPPEGVPLGLRNIHIFGLANVL
HRPIILLDSLSGMRSSGDYSATFLPGLVPAEKCTGKDGHLNKPICIAWSSSGRNHYIPLV
GIKGAALPKLPMNLLPKAWGVPQDLIKKYIKLEEDGGCVIGGDRSLQDKYLLRLVAAMEE
VFMDKHGIHPSLVADVHQYFYRRTGVIGVQPEEVTAAAKKAVMDNRLHKCLLCGALSELH
VPPEWLVPGGKLYNLAKSTHGQLRPDKNYSFPLNNLVCSYDSVKDVLIPDYGLSNLTACN
WCHGTSVRRVRGDGSIVYMDGDRTNTRSTGGKCGCGFKHFWEGKEYDNLPEAFPITLEWG
GRVVRETVYWFQYESDSSLNSNVYDVAMKLVTKHFPGEFGSEILVQKVVHTILHQTAKKN
PDDYTPVNIDGAHAQRVGDGQELEPQLPTKIILTGQKTKTLHKEELNMSKTERTIQQNIT
EQASIMQKRKTEKLKQEQKGHPRTVSPGAIRDGPSSAPATPTKSPYSPTTSKEKKIRITT
NDGRQSMVTLKSSTTFFELQESIAREFNIPPYLQCIRYGFPPKELMPPQAGMEKEPVPLQ
HGDRITIEILKSKAEGGQSATAHSAHTVKQEDIAVTSKLASKELQEQADKEMYSLCLLAT
LMGEDVWSYAKGLPHMFQQGGVFYNIMKKTMGMVDGKHCTFPHLPGKTFVYNASEDRLEL
CVDAAGHFPIGPDVEDLVKEALSQVRAEATTRSRESSPSHGLLKLGSGGVVKKKSEQFHN
VTAFQGKGHSLGTASSSPHLDPRARETTVVRKHNTGTDFSSSIKTEPPAYTSAPSNSELI
RIAPGVVTMRDSRQLDPDLIEAQRKKLQEMVSSIQASMDKHMRDQSTEQAPSDLPQRKVD
VSSSVKSGSLQPGLPESFSLTGGTENLNTETTDSCVAAALGSAFATRSKAQKGNSVEEPE
EMDSQDAEMTNTTEPMDHS
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagccgccgcctccgcctccgctgccgccgccgccgccgcctcctgaggctcct
cagactccgccaccgctggcggcggcggcggcggccgctccgggtgggctctcgaagcga
cgagaccggagaatcctctccgggagctgcccggaccccaagtgccaggcgcggctgttc
ttcccggcctccggttctgttagcatcgagtgtaccgagtgcggacagcggcacgagcag
caacagctgctgggggtggaggaggtgaccgacccggacgtcgtactacacaacctgctc
cggaacgcgctgctcggggtgacgggcgcacccaagaagaacacggaactggtcaaggtg
atgggcctttccaactaccactgcaaattgttgtcgcccatattggctcgctacggcatg
gacaaacagacagggcgggccaagctcctccgggacatgaaccagggcgagctgttcgat
tgcgctctgctgggtgaccgcgcattcctcatcgaacccgagcacgttaacacggtgggc
tatggcaaggaccgctcgggcagcctcctctatttgcacgacaccctggaggatatcaaa
cgggccaacaaaagccaagaatgcctgatcccagtgcatgtggacggggatggacattgc
ctagtgcatgcagtgtcccgggcgctagtgggccgagagctcttctggcatgccttacga
gagaacctgaaacagcacttccagcagcacctggcccagtaccaagccctgttccacgac
ttcattgatgctgctgagtgggaggacattatcaatgagtgtgaccctctttttgtacct
cccgagggtgttcccttgggcctgaggaacatccacatatttggccttgccaacgtgtta
catcgtcccattattctgctagattctctcagtgggatgagaagctctggtgattattca
gccacttttctgcctggactcgtccctgcggagaaatgtactgggaaggatggtcatttg
aacaaaccgatctgtattgcatggagcagctccggtaggaaccactatatccccctggta
ggcatcaaaggggctgctttgcccaaactgccaatgaatttgcttccaaaagcatggggt
gtgcctcaggacttaattaaaaagtatatcaaacttgaggaggatggcggttgtgttatt
ggaggagacagaagtttgcaggataaatacttacttaggcttgttgctgctatggaagaa
gtctttatggacaaacatggtattcatcctagtttggttgctgatgtccatcagtatttc
tacaggaggactggagtgatcggagttcagcctgaagaagtcacagcagctgctaaaaaa
gcagtcatggataatcgtcttcataaatgtttgctctgtggtgccctttctgaacttcat
gttcctccagagtggctggttccaggagggaaactgtataacctcgcaaaaagtacccat
ggacagctgagacctgacaaaaattatagctttcccttgaacaatttggtttgctcttat
gattcagtgaaagatgtcctgataccggactatggattgagtaacctcacagcttgtaat
tggtgtcatggcacatcagtgcgaagggtgagaggagatgggtctattgtgtatatggat
ggggacagaactaatactaggtccactggtggcaagtgtggttgtgggttcaaacatttt
tgggagggtaaagagtatgacaatctaccagaagctttccctattactttggaatggggt
ggaagagtggtcagagaaacagtttattggttccagtatgaaagtgattcttctttgaat
agtaatgtttatgatgttgcaatgaaacttgttacaaagcactttccaggtgaatttggg
agtgaaatccttgttcagaaagttgttcacactatactgcatcagactgccaaaaaaaat
cccgatgattatactcctgtaaatatagatggtgctcatgcccaaagagttggagatgga
caagagttagagcctcagctcccaactaaaattattcttactggacagaaaacaaaaact
ttgcacaaggaggagttaaacatgagtaaaactgaaagaactattcaacagaatattaca
gaacaggcttctataatgcagaaacggaaaacagagaagttaaaacaagaacaaaaaggc
catcccaggactgtatctccaggtgccatacgtgatggtccatcttctgcacctgctacc
cccaccaaatctccctattcaccaaccacttcgaaggagaagaagatccgaattacaact
aatgatgggcgacagtccatggttacactcaagtcttccacaaccttttttgaacttcag
gaaagtattgccagggaattcaacattcctccatatttacagtgcattcgatatggcttc
cctcctaaagagttaatgccaccccaggcaggaatggaaaaggagccagttcctttacag
catggtgacagaattacaatagagattctaaaaagtaaagcagaaggtggtcagtctgcc
actgcacactcggcccacactgtgaaacaagaagatattgctgttactagtaaactggca
tccaaggaacttcaggaacaagctgacaaagaaatgtactccttatgtcttctagcaaca
ttaatgggagaagatgtatggtcttacgcaaaagggcttccgcacatgttccagcaaggc
ggtgtgttctacaacattatgaagaaaaccatgggtatggttgatggcaagcactgtact
tttccacatctacctggcaaaacatttgtctataatgcatctgaagatagactggagttg
tgtgtggatgctgcaggacattttcccatcggtcctgatgttgaagatttagtgaaggag
gctttaagtcaggttcgagcagaggctactacaagaagtagggagtcaagtccctcacat
gggctgttgaaactagggagtggtggagtagtgaaaaagaaatctgagcaatttcataat
gtaactgcctttcagggaaaggggcattctctaggaactgcatccagtagcccccacctt
gatccaagagctagggaaactacagttgtgagaaagcataacacagggactgactttagt
agttctattaaaacagagcctcctgcatacacctctgctcctagtaacagtgagcttatt
cgaatagctcctggagtagttacaatgagagacagtaggcagcttgatcctgatctaatt
gaggcccagcgaaaaaagttgcaggaaatggtttcttctattcaggcttcaatggacaag
cacatgcgggatcaaagtacagaacaggcaccatctgatcttcctcaaaggaaagtagat
gtcagctcttctgtgaagtctggaagtcttcagcctggtttgcctgaatctttctcttta
actggtggcactgaaaatttgaatacagaaacaactgatagctgtgtggcagcagcacta
ggatcagcattcgccacaagatcaaaagcacaaaagggaaattctgtggaggaacccgaa
gagatggatagtcaagacgctgagatgacaaacacaactgagccaatggatcactcttga
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integrated database retrieval system
