Sorex fumeus (smoky shrew): 130039319
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Entry
130039319 CDS
T10594
Symbol
BCOR
Name
(RefSeq) BCL-6 corepressor isoform X1
KO
K23215
bcl-6 corepressor
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130039319 (BCOR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfum03036
]
130039319 (BCOR)
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
130039319 (BCOR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BCOR
PUFD
Ank_2
Ank
Ank_3
Ank_5
Ank_4
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
130039319
NCBI-ProteinID:
XP_055987146
LinkDB
All DBs
Position
Unknown
AA seq
1758 aa
AA seq
DB search
MLSATPLYGNVHSWMNSERVRMCGINEDRKIPVNDGDASKARLELREDNPVNHSVVDATT
AHRIDGLAALSMDRTGLIREGLRVPGNIVYSNLCGLGAEKGREAATSTLAGLGFSSERNP
EMQFKPTTPETVEASAVAGKAPNGFSAIYKTPPGIQKGAVPTADTLGLDRPTSDKQNPLN
INGASYLRLPWVNPYMEGATPAIYPFLDSPNKYSLNMYKALLPQQSYSLAQPLYSPVCTN
GERFLYLPPPHYVSPHIPSSLASPMRLSTPSASPAIPPLVHCADKSLPWKMGVSPGNPVE
PHAYPHIQNSKQPRVPSAKAVTSGLPGDAALLLPPSPRPSPRVHLPSQPPADTYSEFHKH
YARISTSPSVTLSKPYMTVSSEFPGARLSNSKYPKAPEGAEGGPSGAGHPRKATGQDRKE
GSSPPLLEKQPVTKDTTDKPLDLSAKVVDGGEASKAEHVKKMPPTVLVHSRAASGLVLAG
SELPKETLSPPGNGCAIYRSEIISTAPSSWVVPGPSPNEENNGKSLPLKNKALDWAIPQQ
RSSSCPRMGGADAVVTNVAGAVPSGGRPASASPAPNANTEGSKTSRTVDTTPSVIQHVGQ
PPTTPAKHSGGVSSKGTKTSNPEPSFKANENGLPPSSIFLSPNEAFRSPPIPYPRSYLPY
PAPEGIAISPLSLHGKGPVYPHPVLLPNGSLFPGHLAPKPGLPYGLPTGRPEFVTYQDAL
GLGMVHPMLIPHTPIDITKEEKPERRSRSHERARYEDPSLRSRFSEMLEASSAKLHPEVP
ADKNLKPNPSWNQGKPVLKSDKLVYVDLLREEPASVKADATLSKPSFAAAESGTQSTEPP
QPPADPALQPHRDFITLREELGRISDFHEAYAFKQAPGQSVFSLSKENVPAGTPKETLGV
SVSTPFLEPSLGSDGPAVTFGKAQEDPKPFCVGGAPPNVDVTPAYTKEGADEAESSDGKV
LKPKPSKLAKRIANSAGYVGDRFKCVTTELYADSSQLSREQRALQMEGLQEDSILCLPAA
YCERAMMRFSELEMKEREGGHPTTKDSEVCKFSPADWERLKGNQDKKPKSVALEEAIAEQ
NDSERSEYSAGNKQDPSEDKELPAEKYLVDRQPVSEAAPEPAAPDMPHSPALRLDRKRRA
SGDTGHTETPGDELPDDPLLKAKRRRVSKDDWPEREMTPSSSNHLEDPHYSELTNLKVCI
ELTGLHPKKQRHLLHLRERWEQQVSAAEGKPGRQGRKEVTQAEQPEVTAQGNNIPDDKAG
RKRAEGKGHRGWPEDCLKPGEPEQGLPVFSGSPPMRSLSSTNASGKKQTQPSCTPASRPS
AKQPKIKESQKTDVPCTDEEEDCQAASLLQKYTDSSEKPSGKRLCKTKHLIPQEPRRGGA
LPGDYYVENTDGKVTVRRFRKRPEPSADFDISPGKQDQKPFDRLQQLLPATQTSQLPCSN
SPPETTQSRPMPPEARRLIVNKNAGETLLQRAARLGYEEVVLYCLENKICDVNHRDNAGY
CALHEACARGWLNIVRHLLEYGADVNCSAQDGTRPLHDAVENDHLEIVRLLLSYGADPTL
ATYSGRTIMKMTHSELMEKFLTDYLNDLQGRSDDEDCASSWEFHGSSVCEPDDESGYDVL
ANPPGPEDQDEEEETGSDVFEFEFSESPLLPCYNVQVSVAQGPRNWLLLSDVLKKLKMSS
RIFRCNFPNVEIVTIAEAEFYRQVSASLLFSCSKDTEAFNPESKELLDLVEFTSELQALL
GSTVEWLHPSDMVSDAYW
NT seq
5277 nt
NT seq
+upstream
nt +downstream
nt
atgctttcagcaacccccctgtatgggaacgttcacagctggatgaacagtgagagggtc
cgcatgtgtggcatcaacgaagacaggaagattcctgtaaatgatggtgatgcttccaag
gccagactggaactgagggaggacaatcccgtgaaccacagcgtggtggacgcgaccacg
gcccatcgcattgatgggctggcagcactgagcatggaccgcacgggcctgatccgggaa
gggctgcgggtgcccggcaacatcgtctattcgaacttgtgtggactgggggccgagaaa
ggccgggaggcagccacaagcacactcgcaggtcttggcttctcttccgagaggaatcca
gaaatgcaattcaaacccaccacccccgagaccgtggaggcttctgctgtagccggcaaa
gcccccaatggcttcagtgctatctataaaacaccccctggaatacaaaaaggtgccgtc
cccaccgctgacaccctgggcttggaccgacctaccagtgacaagcagaacccacttaac
atcaatggtgctagttatctgcgtcttccttgggtcaatccttacatggagggggctacc
ccagccatctatccttttcttgactcgcccaataagtattcactgaacatgtacaaggcc
ttgctacctcagcagtcctacagcttggcccagccgctgtactctccggtctgcactaac
ggggagcgattcctctacctgcctccccctcactacgtcagcccccacatcccctcatcc
ctggcatcgcccatgaggctctcgacgccttcggcctccccggccatccctccgctggtc
cactgtgcagataagagcctgccctggaagatgggcgtcagtcccgggaacccggtggag
ccacacgcctaccctcacatccaaaacagcaaacagcctcgggtgccctcagccaaggcc
gtcaccagtgggctgccaggggatgctgctctcctgctgcccccctcgcctcggccttcc
cctcgcgtgcacctgccctctcagccccccgcagacacctactcagaattccacaagcac
tacgccaggatctccacctccccctcggtcaccctgtcgaagccatacatgacggtcagc
agcgagttccccggggccaggctctccaacagcaagtatcccaaggccccggagggagcc
gaggggggcccatctggggctgggcacccccgtaaggccacagggcaagacaggaaggaa
ggcagctcgccgcccctgttggagaagcagccggttaccaaagacaccaccgacaagcca
ctcgacttgtccgcgaaagtggtggatggcggtgaggcctccaaagccgagcacgtgaag
aagatgccccccacggtgctggtgcacagccgagccgccagcggcttagtgctcgctgga
agcgagctgccgaaagaaaccttatctcctcccggaaacggctgtgctatctatagatct
gaaatcattagcactgctccctcgtcctgggtggtgcccgggcccagtcccaacgaagag
aacaatggcaagagcctgcctctgaaaaacaaggccctggactgggccatcccccagcag
cggagctcttcgtgtccccgcatgggtggcgctgatgcggtggtcaccaacgtggcgggg
gccgtgcccagtggcggccgcccagcctccgcgtcgcccgcccccaacgccaacaccgag
ggcagcaagaccagccgcaccgtcgacaccacaccatctgtcatccagcacgtgggccag
ccccccaccacgccagccaagcacagcggcggcgtcagtagcaagggcaccaaaaccagc
aatcccgaacccagctttaaagcaaacgaaaatggcctgccacccagctccatcttcctg
tcccccaacgaggcgttcaggtcccctcccatcccctatccccggagctacctcccgtac
ccagctccagagggcattgccatcagccccctctctttacacgggaagggacctgtctac
cctcatcccgttttgttgccgaacggcagtctcttccctgggcacctggcccccaagcct
gggctgccctacggactccccacaggccggccagagtttgttacctaccaagatgcgctg
gggttgggcatggtgcaccccatgttaatacctcacacgcccatcgacatcactaaggag
gagaagcccgagaggcggtcccgctcccacgagagagcccgctacgaggaccccagcctc
cggagccgattctccgagatgttggaagctagcagcgccaagctgcaccctgaagtcccc
gcggacaaaaacctcaagccgaaccccagttggaatcaagggaagcccgtcctcaaaagc
gacaagctcgtctacgtcgacctcctccgggaagagcctgcctcggtgaaagccgacgcc
accctgtccaaacccagcttcgccgctgccgagagcgggacccagagcactgagcccccc
cagccccccgcagacccggccctgcagccccaccgagatttcatcaccctgcgggaagag
ctggggcgcatcagtgacttccacgaagcttatgccttcaaacaggcgccaggccagtcg
gtcttcagcctgagcaaggagaacgtgccagcgggaacccccaaggagactctgggggtg
tcagtctccactccgtttctggagccgagtctgggcagcgacggtcccgctgtaactttt
ggtaaagctcaagaggatcccaaaccattttgcgtgggcggtgctccccccaacgtggac
gtcacccctgcctataccaaagagggagccgatgaggccgagtccagcgatggcaaagtg
ctgaaacccaagccatccaagctggccaagagaatcgccaactccgccggttacgtgggt
gaccgattcaagtgtgtcacgaccgaactgtacgctgactcgagtcagctcagccgggag
cagcgggcattgcagatggaaggattacaagaggacagtattttatgtctacccgctgct
tactgtgagcgtgcaatgatgcgcttctccgagttggagatgaaagagcgagaagggggc
caccctacaaccaaagactccgaagtgtgcaaattcagccccgctgactgggaaaggttg
aaaggaaatcaggacaaaaagccaaagtcggtcgccctggaggaggccattgctgagcag
aatgacagtgagagaagcgaatacagtgccgggaacaaacaggacccctcggaagacaag
gagctgcctgctgagaagtacttggtggacaggcagcctgtgagcgaggcagcccccgag
cctgcggccccggatatgccacacagcccagcgctccggctggaccgcaaacgcagggca
tccggtgacactggccacaccgagaccccgggggacgagctgcctgatgacccgctgctg
aaagccaagcgcaggagggtgtccaaagatgactggcctgagagggaaatgacacccagt
tcctctaaccacttagaagacccacattatagtgagctgaccaacctgaaggtgtgcatt
gaattaacagggctccatcctaaaaagcaacgccacttgctgcacctcagagaacgctgg
gaacagcaggtgtcggcagccgagggcaaacctggccggcagggcaggaaggaagtgacc
caggccgaacagcctgaggtcaccgcgcagggcaataacatccccgacgacaaagcgggc
aggaaaagggcagaaggcaaaggacacagaggctggcccgaagactgtctgaagcctgga
gagcctgagcaaggcttgcctgtgttctccggctctccgcccatgaggagcctttcatcc
accaatgcaagcggcaaaaagcagactcagccaagctgcacgccagcctcgaggccgtct
gccaaacagcccaaaattaaagaaagccagaagacagatgtgccgtgcacagacgaggag
gaagactgccaggctgcctccctgctgcagaaatacaccgacagcagcgagaaaccgtcc
gggaagagactgtgcaaaaccaagcacttgatcccgcaggagccccggcggggtggggcg
ctgccaggggactactacgtggagaatactgatggcaaggtgaccgtgcggcggttccgc
aagcgacctgagcccagtgctgacttcgacatatcacctggcaagcaggaccagaagccc
ttcgatcggctccagcagctgttacctgctacccagacctcacagctgccgtgctccaac
tcccctcccgagaccacccagtcccggcccatgccacccgaggcccgcaggctgatcgtc
aataagaacgctggcgagaccctcttgcagcgagctgctcgcctcggctatgaggaagtg
gtcctgtactgcctggaaaacaaaatttgtgacgtgaaccaccgagacaacgcaggctac
tgtgccctgcatgaagcctgtgccagaggatggcttaacattgtaaggcacctgctagag
tatggtgccgacgtcaactgcagtgcccaggacgggactcggcctctccatgatgctgtc
gagaatgatcacctggaaattgtccgactacttctctcctatggtgctgaccccactttg
gctacatactcaggtagaaccatcatgaaaatgacgcacagtgaacttatggagaagttt
ctcacagattacctgaatgatctgcaaggcagaagtgatgacgaggactgtgccagttcc
tgggagttccatggcagctccgtgtgtgagccagatgatgagagcggctatgacgtgtta
gcaaaccctcctgggcccgaggaccaggacgaggaggaggagactggcagcgatgtgttt
gaattcgaattctccgaaagccccctgttgccctgttacaacgtccaagtgtctgtcgct
caggggcctcggaactggctcttgctctccgatgtcctcaagaaattgaagatgtcttcc
cgcatcttccgctgcaatttccccaatgtggagattgtcaccatcgcagaggcagaattc
taccggcaagtttcagcaagtctgttgttttcttgctccaaagacacggaggcgtttaac
cccgagagcaaggagctgttagacctggtggagttcaccagcgagctgcaggctctgctg
gggtccacagttgagtggctgcaccccagtgacatggtctccgatgcctactggtga
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integrated database retrieval system
