Sorex fumeus (smoky shrew): 130039381
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Entry
130039381 CDS
T10594
Symbol
MID1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130039381 (MID1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfum04121
]
130039381 (MID1)
Enzymes [BR:
sfum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130039381 (MID1)
Ubiquitin system [BR:
sfum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130039381 (MID1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
PRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
Ig_DSCAM-DSCAML_C
zf-RING_2
zf-RING_5
zf-C3HC4_2
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
130039381
NCBI-ProteinID:
XP_055987247
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR
HVITLSHRGLDGLKRNVTLQNIIDRFQKASVSSPNSPSETRRERAFDAHTMTSAEKVLCQ
FCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRNTELETL
LAKLIQTCQHVEVNASRQEAKLMEECDLLIEIIQQRRQIIGTKIKEGKVMRLRKLAQQIA
NCKQCIERSASLISQAEHSLKENDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFD
TFALDFSREKKLLECLDYLTAPSSPTIREELCTASYDTITVHWTSDDEFSVVSYELRYTI
FTGQANLVSLCNSADSWMIVPNIKQNHYTVHGMQSGTKYIFMVKAINQAGSRSSEPGKLK
TNSQPFKLDPKSAHRKLKVSHDNLTVEREESSSKKSHTPERFTSQGNYGIAGNVFIDSGR
HYWEVVISGSTWYAIGLAYKSAPKHEWIGKNSASWALCRCHNNWVVRHNSKEIPIDPAPH
LRRVGILLDYDNGSIAFYDALNSMHLYTFDITFSQPVCPTFTLWNKCLTIITGLPIPDHL
DCAEQLS
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggagctgacctgccctatttgtctggagctcttcgaggaccct
ctcctgctgccctgcgcacacagcctctgcttcaactgtgcccatcgcatcctggtgtcg
cactgtgccaccaacgagtctgtggagtccatcaccgccttccagtgccccacctgcagg
catgtcatcactctcagccaccgcggtctagacgggctcaagcgcaacgtcaccctgcag
aacatcattgacaggttccagaaagcgtctgtgagcagtcccaattcccccagcgagacc
cgccgcgagcgtgcctttgacgcccacaccatgacctccgccgagaaagtgctctgccag
ttctgtgaccaggatcctgcccaggatgccgtgaagacctgtgtcacttgtgaagtgtcc
tactgtgatgagtgcctgaaagccactcacccgaataagaagcccttcacgggccaccgt
ctgattgagccaattccggactcgcacattcgggggctgatgtgtctggagcatgaggat
gagaaggtgaatatgtactgtgtgaccgatgaccagttaatctgtgccttgtgtaaactg
gttgggcggcaccgagatcatcaggtggcagctttgagtgagcgctatgacaaattgaag
caaaacttagagagtaatctcaccaaccttattaagaggaacacagaactggagaccctt
ttggccaaactcatccaaacctgtcaacatgtggaggtcaatgcatcccgtcaagaagcc
aaactgatggaagagtgtgatcttctcattgagatcattcagcaaagacgacagattatt
ggaaccaagatcaaagaagggaaggtgatgaggcttcgcaaactggctcagcagattgca
aactgcaaacagtgcattgagcgctcggcatccctcatctcccaagcggagcactctctc
aaggagaatgatcatgcacgtttcctccagacggctaagaatatcactgagagagtctct
atggcaacagcatcctcccaggtcttaattccggaaatcaacctcaatgacacgtttgac
acctttgccttagatttttccagagagaaaaagttgctagaatgcctggattaccttaca
gcccccagctctcctacaattagagaagagctgtgtacagcttcctacgataccatcact
gtccactggacctccgacgatgaattcagtgtggtttcctatgagctccgctacaccatc
ttcactggacaagccaacctcgtcagtctgtgtaactccgctgatagctggatgatcgtg
cccaacatcaagcagaaccactacacggtgcatgggatgcagagcggcaccaagtacatc
ttcatggtcaaggccatcaaccaggcaggcagccgcagcagtgagcctgggaagctgaag
acaaacagccaaccatttaaactggaccccaaatctgcacatcgaaagctgaaagtgtcc
catgataacttgacagtcgagcgggaagagtcatcatccaaaaagagtcacacacctgaa
cgcttcaccagccaaggaaactatggcatagctggcaatgtgttcatcgacagtggccgt
cactactgggaagtggtcataagtggaagcacctggtatgctattggcctggcctacaaa
tcagcaccgaagcacgagtggatcgggaaaaactcggcttcctgggcactgtgtcgctgt
cacaataactgggtagtgagacacaacagcaaagagatccccattgaccccgcccctcac
ctccggcgtgtgggtatcctgctggactatgacaacggctccatcgccttctacgatgct
ttgaactccatgcacctctataccttcgacatcaccttctcgcagcccgtgtgccccacc
tttaccctgtggaacaaatgtttgaccattatcactggcctccccatcccagatcatctg
gactgcgctgagcagctctcctga
DBGET
integrated database retrieval system
