KEGG   Sorex fumeus (smoky shrew): 130039392
Entry
130039392         CDS       T10594                                 
Symbol
RBBP7
Name
(RefSeq) histone-binding protein RBBP7 isoform X1
  KO
K11659  histone-binding protein RBBP7
Organism
sfum  Sorex fumeus (smoky shrew)
Pathway
sfum03082  ATP-dependent chromatin remodeling
sfum03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:sfum00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    130039392 (RBBP7)
   03083 Polycomb repressive complex
    130039392 (RBBP7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sfum03036]
    130039392 (RBBP7)
Chromosome and associated proteins [BR:sfum03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     130039392 (RBBP7)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     130039392 (RBBP7)
    PRC2.2
     130039392 (RBBP7)
  Chromatin remodeling factors
   NuRD complex
    130039392 (RBBP7)
   NuRF complex
    130039392 (RBBP7)
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz CAF1C_H4-bd WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st EIF3I Beta-prop_EML Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_1st WD40_RFWD3 Beta-prop_WDR19_1st WD_LRWD1 ANAPC4_WD40 Beta-prop_DCAF12 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_IFT122_1st MIOS_WD40 NBCH_WD40 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 130039392
NCBI-ProteinID: XP_055987270
LinkDB
Position
Unknown
AA seq 470 aa
MADNASCAGAAEASPSGGWRERAAGCLLHVDSPPRVGRGARLPPGRHFRTVFEDTVEERV
INEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQ
NHLVVARVHIPNDDAQFDASHCESDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQN
PHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSA
SDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWD
TRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESH
KDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAK
ISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSELEGQGS
NT seq 1413 nt   +upstreamnt  +downstreamnt
atggcggacaacgcgagctgcgcgggagccgccgaggcctcgccgagtgggggatggagg
gagcgggccgctgggtgtctgctgcacgtggattccccgccgcgggtgggtcgcggagcc
cggctgcctccgggtcggcattttcgaacagtgtttgaagacaccgtggaggagcgtgtc
atcaatgaagaatataaaatctggaagaagaatacaccgtttctgtatgacctggttatg
acccatgctcttcagtggccgagtcttaccgttcagtggcttcctgaagtgactaaaccg
gaaggaaaggattatgccctccactggctagtgctgggaacccatacttccgatgagcag
aatcatcttgtggttgctcgagtccatattccgaatgatgatgcgcagtttgatgcttcc
cactgcgagagtgacaagggggaatttggtggctttggttctgtgacaggaaaaattgaa
tgtgaaattaaaatcaaccacgaaggagaagtaaaccgtgctcgttacatgccacagaac
cctcatatcattgcaacaaaaaccccatcttcggatgtgctggtttttgattatacgaag
caccctgctaaaccagatccaagtggagaatgcaatcctgatctccgtctgagaggtcac
cagaaggaaggctatggcctttcctggaattctaatttgagtggacatcttctgagtgca
tctgatgaccataccgtctgtctgtgggatataaatgcaggaccaaaggaaggcaagatt
gtggatgctaaagccatcttcactggccactcggctgtggtggaggacgtggcctggcac
ctgctgcacgagtccttgtttggatctgttgctgatgatcagaagctgatgatatgggac
accagatccaacaccacctccaagcccagccacctggtggacgcgcacaccgccgaggtc
aattgcctgtcgttcaatccctacagcgagttcattcttgccactggctctgcagataag
actgtagctttatgggatctgcgcaacttaaaattgaagctccatacctttgagtctcat
aaagatgaaatcttccaggtccactggtctccacataatgaaactatcctggcatcaagt
ggtactgatcgccgcctgaatgtgtgggatttaagcaaaatcggagaagagcagtctgcg
gaagacgccgaggacgggcctccagaactgctgttcattcatggagggcataccgccaag
atctccgatttcagctggaaccccaatgagccttgggtcatttgctcagtgtctgaggat
aacatcatgcagatatggcaaatggccgaaaacatttacaacgatgaagagtcggatgtc
acaacatcggaactggaggggcaaggatcttaa

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