Sorex fumeus (smoky shrew): 130039407
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Entry
130039407 CDS
T10594
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH1B-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04115
p53 signaling pathway
sfum04120
Ubiquitin mediated proteolysis
sfum04137
Mitophagy - animal
sfum04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130039407
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
130039407
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
130039407
09143 Cell growth and death
04115 p53 signaling pathway
130039407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfum04121
]
130039407
Enzymes [BR:
sfum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130039407
Ubiquitin system [BR:
sfum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
130039407
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
130039407
NCBI-ProteinID:
XP_055987284
LinkDB
All DBs
Position
Unknown
AA seq
274 aa
AA seq
DB search
MSHLTSTSTGSSQRAPALTDISAANELARLFECQLCFKYVLPPIIQCQDGHLFCVGCRRK
LKCCSTCRSPFRTIRSLAKEKVANSVRFPCKFSPSGCDRYLTLAEKLDHENLCKCRPYSC
PCPGTNCKWHGLMDAIIPHLTDQHKSIITLEGDDIVFLAADINIPGAINWVMMQSCFGFN
FMLVLEKKENHNGYEEFIAIAQLIGSRKDAENFIYRLELNSHQRRLVWEGVPISVNDEIP
TARKKGDCLIFDASLAKHFIENGNLSINVTIISC
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgagccatctaacttcaacctctactggatcatctcagagggcacctgctctgactgac
atatctgcggccaatgagttggcacgtctttttgagtgccaactttgcttcaaatatgtg
ctaccccccattattcaatgccaagatggccatcttttttgtgtcggctgccgccgaaag
ctcaaatgttgctcaacttgcagaagcccattcagaaccattcgcagtcttgctaaggag
aaagtggctaattcagtacgttttccttgtaaattttctccttctgggtgtgatcgatat
ctgacactcgcagaaaaattagatcatgagaacttgtgtaagtgtaggccttattcttgc
ccatgcccaggcactaactgtaaatggcatggcttaatggatgctataataccccatctg
acagatcagcataagtccattataaccctcgagggagatgatatagttttccttgctgca
gatattaatattcccggtgcgattaactgggtcatgatgcagtcttgttttggctttaac
ttcatgttagttttggaaaaaaaggaaaaccacaatggttatgaggagtttattgccatt
gcgcagctaataggatcaagaaaagatgctgaaaattttatttatcgccttgagttaaat
tctcatcagcggcgattagtttgggaaggggtccctatatctgttaatgacgaaattcca
acagccaggaagaaaggggactgccttatctttgatgctagccttgcaaagcattttata
gaaaatggcaatttaagtatcaatgttactattatctcatgttaa
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