Sorex fumeus (smoky shrew): 130039515
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Entry
130039515 CDS
T10594
Symbol
SBNO1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfum03036
]
130039515 (SBNO1)
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
130039515 (SBNO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
130039515
NCBI-ProteinID:
XP_055987352
LinkDB
All DBs
Position
Unknown
AA seq
1392 aa
AA seq
DB search
MVEPGQDLLLAALSESGISPNDLFDIDGGDAGLAAPASTPVQQSVPLSTIELGLETETAV
PVKQEPETVPTSALINVRVRPPSTTTFVLNQINQLPTLGSTIVMTKTPPVTTNRQTITLT
KFIQTTANTRPSVSAPTVRNAMTSAPSKDQVQLKDLLKNSSLNELMKLKPPANIAQPVAT
AATDVSNGTVKKESSNKEVARIWINDMKMRSFSPTMKVPVVKEEDEPEEEDEEEMGHAET
YAEYMPIKLKIGLRHPDAVVETSSLSSVTPPDVWYKTSISEETIDNGWLSALQLEAITYA
AQQHETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLSRKRALWFSVSNDLKYDAER
DLRDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYKTRLKQL
LHWCGDDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKARVVYASATGASE
PRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFTGV
TFKIEEVLLSQSYVKMYNKAVKLWVVARERFQQAADLIDAEQRMKKSMWGQFWSAHQRFF
KYLCIASKVKRVVQLAREEIKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTAKGVL
QSLIEKHFPAPDRKKLYSLLGIDLTAPSNNSSPRDSPCKENKVKKRKGEEITRESKKARK
VGGLTGSSSDDSGSESDASGNEESDYESSKNMSSGDDDDFNPFRDESSEDDEDDPWLIRK
DHKKNKDKKKRKSIDPDSIQSALLASGLGSKRPSFSSTPVIAPAPNSAPANSNTNSNSSL
ITSQDAVERAQQMKKDLLDKLEKLAEDLPPNTLDELIDELGGPENVAEMTGRKGRVVSND
DGSISYESRSEIDVPVEILNITEKQRFMDGEKNIAIISEAASSGISLQADRRAKNQRRRV
HMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAKRLESLGALTH
GDRRATESRDLSRFNFDNKYGRNALEIVMKSIVNLDSPMVSPPPDYPGEFFKDVRQGLIG
VGLINVEDRSGILTLDKDYNNIGKFLNRILGMEVHQQNALFQYFADTLTAVVQNAKKNGR
YDMGILDLGSGDEKVRKSDVKKFLTPGYSTSGHVELYTISVERGMSWEEATKIWAELTGP
DDGFYLSLQIRNNKKTAILVKEVNPKKKLFLVYRPNTGKQLKLEIYADLKKKYKKVVSDD
ALAHWLDQYNSSADTCTHAYWRGNCKKASLGLVCEIGLRCRTYYVLCGSVLSVWTKVEGV
LASVSGTNVKMQIVRLRTEDGQRIVGLIIPANCVSPLVNLLSTSDQSQQLAVQQKQLWQQ
RHPQSIASLSNA
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atggtggagccagggcaagatttactgcttgctgctctgagtgaaagtggaatcagtcct
aatgacctctttgatattgatggtggagatgcagggcttgcggcgccagcatctactcca
gttcagcagtcagtaccacttagtacaatagaactgggtttggagactgaaacagcagtt
cctgttaaacaagaaccagagacggtacctacttcagcactaataaatgttagggtaaga
cctccgtctactacaacatttgtgctcaatcaaattaatcagcttccaaccttgggctct
acaattgtaatgaccaaaaccccacctgtaacgacaaatcggcaaaccatcacattaacc
aagtttattcagaccacagccaacacacgtccttcagtttcagcacccacagtgagaaat
gctatgacctctgcaccttccaaagaccaggtccaactgaaggacttgctgaagaacagc
agcctgaacgaactcatgaagctgaagcccccagccaacatcgcacagccagtggccact
gcagctactgatgtaagcaatggaacagtaaagaaagagtcctctaataaagaagtagca
agaatatggataaacgacatgaagatgaggagtttttccccaaccatgaaagtccctgtt
gtgaaagaagaagatgaaccagaggaagaagatgaagaagaaatggggcatgcagaaacc
tacgcagagtatatgccgataaaattaaaaatcggcctgcgtcacccagatgctgtagtg
gaaaccagttctttatctagtgtcactcctcctgatgtctggtacaaaacatctatttct
gaagagaccattgacaatggctggttatcagcattgcagctcgaggcaatcacatatgca
gcccagcaacatgaaacatttctgcctaatggagatcgtgctggcttcttaattggtgat
ggtgcaggtgtaggtaaaggaaggaccatagcaggaatcatctatgaaaattatttgctg
agtaggaaaagagcattatggttcagtgtttcaaatgatttaaagtatgatgctgaaaga
gatttgagggatattggagcaaaaaacattttggttcattcattaaataagtttaagtat
ggaaaaatatcttcgaaacataatggaagtgtgaaaaaaggtgtcatttttgctacctat
tcttcccttattggtgaaagtcagtccggtggcaaatacaaaactagattgaaacagctg
ctacactggtgcggtgatgacttcgatggtgtaatagtgtttgatgaatgtcataaagca
aaaaacttgtgtcctgttggttcctcaaagccaaccaaaacaggcttagcagttttagag
cttcagaacaaattgccaaaagccagagttgtttatgctagtgccactggtgcttctgaa
cctcgaaacatggcctacatgaaccgtcttggaatatggggtgagggaactccatttaga
gaattcagtgattttattcaagcggtagaacgaagaggtgttggtgccatggaaatagtt
gctatggatatgaagcttagaggaatgtacattgcccgacaactaagctttactggagtg
accttcaaaattgaggaagttcttctttctcagagctatgttaaaatgtataacaaagca
gttaagctgtgggtcgtggcccgagaacgatttcagcaggctgcagatctgatcgatgct
gagcagcgaatgaagaagtccatgtggggccagttctggtctgctcaccagaggtttttc
aagtatctgtgcatagcgtcgaaggtaaagagagtcgtacagctcgctcgagaagaaatc
aagaacggaaagtgtgttgtgataggtctgcagtccacaggagaagctaggactctagaa
gccttggaagagggtggaggagaattaaatgattttgtttcaacagccaaaggagtgttg
cagtcactcattgaaaaacacttccctgctccagacaggaaaaaactttatagtttgctc
ggaattgatttgacagctccaagtaacaatagttctccaagagatagtccgtgcaaggaa
aataaagtaaagaagcggaaaggtgaagaaattactcgagaatctaaaaaagcacgaaaa
gttggtggccttactggtagcagttccgatgatagcggaagtgagtctgatgcctctggt
aacgaagagagtgattatgagagctctaaaaacatgagttccggagatgacgacgacttc
aatccgtttagagatgaatctagtgaggacgatgaagatgatccctggttaatcagaaaa
gatcataagaaaaacaaagataaaaaaaagaggaaaagcatcgatccagattctatccaa
agtgccttattagcgtcaggtctgggctcaaagcggcccagtttttcatccacgcctgtc
attgcccctgctcctaacagcgcaccagctaacagtaacaccaacagtaacagtagcctt
ataacaagtcaggatgctgtggaacgggcccagcagatgaagaaagacctactggataaa
ctagaaaaattagctgaagacctgccgcccaataccctggatgagcttatcgatgaactt
ggggggcctgagaatgttgctgagatgactggccggaaagggagggttgtaagcaatgat
gatggaagcatttcatatgagtccaggtctgaaattgatgtccctgtggagatactaaat
atcacagaaaaacaaagatttatggacggagaaaagaatattgcaatcatctcggaagct
gccagctcaggtatttcattacaagcagatcggagagctaaaaatcaaaggcgaagagtc
cacatgactttggaattgccctggagtgcagatagagcaattcagcagttcggtcgaact
cataggtcaaatcaggttactgctcctgaatatgtctttctgatttcggaattggcgggg
gagcaaagatttgcatctattgttgctaaaagattggagagtttgggggcactgacgcat
ggcgacagaagagcaacagaatcgagagatctgagcaggttcaacttcgacaacaagtat
ggaagaaatgctttagaaattgtcatgaaatccattgtaaacctagattctcctatggta
tcaccacctccagactatcctggagaattctttaaagatgttcgacaaggactaatagga
gttggcctcataaatgtagaagatcgctctggaattcttactctagataaagattacaac
aacattgggaaattcttaaatagaattttgggcatggaggtgcatcaacagaatgcgtta
tttcagtattttgcagacaccctaactgcagttgttcaaaatgccaaaaaaaatggaaga
tatgacatgggaatcttagatcttggttctggagatgaaaaggtgaggaaaagtgatgtg
aagaagtttttgactccaggatactcaacctctggccacgtcgagttatacacgataagt
gtagagagggggatgtcttgggaagaagctaccaagatttgggctgaattgacaggacct
gatgatggcttttacttgtctttgcaaataagaaataacaagaaaactgccattttagtt
aaagaagtgaaccctaagaagaagcttttcttggtttataggcctaatactgggaaacaa
ctcaaattagaaatttatgctgatctaaaaaagaaatataaaaaggttgtctctgatgat
gccctggcccactggttagatcagtataactcatctgcagatacttgtacgcatgcttac
tggcgcggcaattgcaaaaaagcaagtttgggattggtttgtgaaataggcctacgttgc
cgcacatactatgtattatgtggctcagtactgagtgtctggacaaaagtggaaggtgtt
ctagcatctgtcagtggcacaaatgtgaaaatgcagatagttcgactaagaacagaagat
gggcagcggatagtaggtttgatcattccagcaaattgtgtgtctcctcttgtaaatctc
ttgtcaacctcagaccagtctcagcagctcgcggtgcagcagaagcagctctggcagcag
cgccacccgcagagcatcgccagcctgagcaacgcgtag
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