Sorex fumeus (smoky shrew): 130039528
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Entry
130039528 CDS
T10594
Symbol
CLIP1
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
130039528 (CLIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfum03036
]
130039528 (CLIP1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sfum04812
]
130039528 (CLIP1)
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
130039528 (CLIP1)
Cytoskeleton proteins [BR:
sfum04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
130039528 (CLIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
Fungal_TACC
Motif
Other DBs
NCBI-GeneID:
130039528
NCBI-ProteinID:
XP_055987373
LinkDB
All DBs
Position
Unknown
AA seq
2120 aa
AA seq
DB search
MSLLRPSGLKAPTKILKHGSSALKAPSAAAAPVEKTVPGEKTPSAPSSETQEEFVDDFRV
GERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLKGIFTR
PSKLSRSLQADDEANGLQPAPAARATPPLSASPAPAGAPKAPQPPTKEAPATPHISNLTR
TASESISNLSEAGSLKKGERELKLGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPL
GKNDGAVAGTRYFQCQPKYGLFAPVHKVTKIGFPSTTPAKAKAAAVRRVMATTPASLKRS
PSASSLSSVSSVASSVSSRPSRTGLLTETSSRYARKISGTTALQEALKEKQQHIEQLLAE
RDLERAEVAKATSHVGEIEQELALARDGHDQHVLELEAKMDQLRAMVEAADREKVELLNQ
LEEEKRKVEDLQFRVEEESITKGDLEVATVSEKSRIMELERDLSLRAQEVAELRRRLEAI
KPAGEADASLSLLQEISALQEKLDAAHTDRQREVASLKEHFGARDDAYQKEAKALQVASE
KLAKENESLRTKLDHANKENADVIALWKSKLETAIASHQQAMGELKASVSRGVGSEAAEL
AELKMQIERLQFEYQQEVETLKAQRAAERAAHASELQALRSRLVRTAQEQENSLEAARAK
LDQTEDQHLVEMEDALNKLQEAETKVKDLEGLRAMCSQQAQALADATAQLEATQEKLLQL
DGLRKASSEGKLEMEKLRQQLQVAEQQIQELENAKRAESGKADSLAEELQGKGLALSSLQ
ENLNEAGRVKEALEKELRSLKEKFAEASEEAASVQKNMQETVDNLHEKEEQIKALSSELE
KLRGNLTDLEAKFKERDVREEQLTKAKAKLENDIADIMKMSGDNSSQLTKMNDELRLKER
CVEELQLQLLKANEHADLLQKSIGEAMLRAEQSQQEAARRHEEKEELHKKLSDLEEKVDV
SRSQCQALQAEHAKASAESQVQHEEALQALQKLLLQAEEKLQAAQAENGSLLREVAELKT
QADKAKSLTYLFTSAKEEIELMSEERRALRSEKQLLAKEKLSLKSERGSFLLKLTEAEAK
NSSLREDQRKLWLMNQAIRLDKEKVLEARLAAEKLCQQERLGREALEAEKEKVLEEGRAV
QEELQRVGAEKAALQVAKVGLQALVEELQISKSSLVAECKKGLEERGQLEEHVKKLVLEN
LSLAKDKDNIIQKLQCSYEELARDQKSLVQEIEELTAEKKSALEKQSDLDSLCMALKLER
DGLAQSNKELQLEKDLLRQEQEKLGASLEASLQVKELLGAEASCLRTQLEEATKAVHKAE
LEALQTQAANASLARLLEQIKTSREISDSECVQLLHEKETLSLAERRLAAEKKELLGEKD
LLAQKLGRCSEEAARVESSLREQLNSLSSEKELLGQKATKLQRQLDWLLKDQALLEAQQT
ELLAEREASLQALGELQQKHEEEAAKHRVAVQEKMKLLGELDVLQRELQEQRQENQGLAA
SQGALEAALQEAQDAARSLEKTHASVLQAKEALDAERQEECRRLAEDRLAAQQALAQERE
ARAQETQTAAHEASQLRGRLGLLEQEVEELRACAQGLQAERLDLLEEKARSDQKVAEILR
EKELLSVDAARLAANIEALKGDFAALSKSKLELQGLHSCLAEILADLQRKHEAALAERAQ
AGQENESLLAEKRELQQERSELLQEKEQLAGSYFLLQKEVSQLAQTSSHVSANLLEAQKE
NRVLRKDKSKLAFKIRELETLQSFTAVQTAEDNRQFMEQMTKEKTETLASLEDTRNTNAK
LQSELDTLKENNLKNVEELNKSKELLTIENQKMEEFKKEIEILRQAAAQNSQQLSALQEE
NVKLAEELGRSRDQVTSQQKLEEERSVLNNQLLEMKKRESELIRDSDEEKASLQKSISIT
SALLTEKDAELEKLRNEVSVLRGENASAKSLHSVVQSLESDKVKLELKVKNLELQLKENK
RQLQSSAGNSDSQADEDERAQENQIDFLNSVIVDLQRKNQDLKMKVEMMSEAALNGNGDD
LNNYDSDDQEKLAKKKPRLFCDICDCFDLHDTEDCPTQTQVSEDPPHSTHHGNRGEERPY
CDICEVFGHWPSNCNDDETF
NT seq
6363 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgctgaggcccagtgggctgaaggcccccaccaagatcctcaagcatgggagc
tcggccctgaaggcgccatcggccgcggctgctcccgttgagaagaccgtgcctggggag
aaaacccccagcgccccctcctcggagacgcaggaggagtttgtggacgacttccgggtc
ggggaacgagtctgggtgaatgggaacaagcctggattcatccagttcctcggggagacc
cagtttgcccctggtcagtgggccgggatcgtcttggacgagcccatcggcaagaacgac
ggctcggtggcgggtgtgcgctacttccagtgcgagccgctgaagggcatcttcacccgg
ccgtccaagctgagcaggagcttgcaggccgatgatgaggccaacggcctgcagccagca
cctgctgcccgggccacaccgcccctgtcggcctccccggcccctgccggcgccccgaag
gcgccccagccccccacgaaggaggcaccggccacccctcacatcagcaacctgaccagg
acggccagcgagtccatctccaacctctcagaggccggctccctcaagaaaggggagcgg
gagctgaagctcggggaccgggtgctggtgggaggcacgaaggccggcgtggtgcgcttc
ctgggggagacggacttcgccaagggggaatggtgtggcgtggagctggatgagccgctg
ggcaagaatgatggtgctgtggccggaacgaggtacttccagtgtcagcccaagtatggc
ttgtttgctcccgttcacaaagtcaccaaaatcggcttcccctccacaacgccggccaag
gccaaggcggccgccgtgaggcgtgtgatggccaccacccccgccagcctgaagcgcagc
ccgtcggcctcctcgctcagctccgtgagctccgtggcctcatccgtgagcagcaggccc
agccgcacgggactattgacggaaacctcctcccgctatgcccgcaagatctccggcacc
accgccctccaggaggcactgaaggagaagcagcagcacattgagcagctgctggccgag
cgggacctggagcgggcggaggtggccaaggccacaagccacgtgggggagatagagcag
gagctggccctggcccgggacgggcacgaccagcacgtcctggagctggaggccaagatg
gaccagctgcgggccatggtggaagcggcagaccgggagaaggtggagctgctgaaccag
ctggaggaggagaagaggaaagtggaggacctccagttccgagtcgaggaggagtccatc
accaaaggtgacctggaggtggccaccgtgtcggagaagtcccggatcatggagctggag
agggacctgtccctgcgggcgcaagaggtggccgagctgcgacggaggctggaggccatc
aagccagccggggaggcagatgcgtcgctgtccctgctgcaggagatcagcgcgctgcag
gagaagctggacgctgcccacacagaccgccagagggaagtcgccagcctcaaggagcac
tttggggcccgggacgatgcctaccagaaggaggcgaaggccctgcaggtggcctccgag
aaactcgccaaggagaacgagtcgctgaggaccaagctggatcatgccaacaaggagaac
gcggacgtgatcgccctgtggaagtccaagctggagacggccatcgcctcgcaccaacag
gccatgggcgagctgaaggcgtccgtgagccggggcgtgggctccgaggcggccgagctg
gccgagctcaagatgcagatcgagaggctgcagttcgagtaccagcaggaggtggagacc
ctgaaggcccagcgggcggccgagcgtgcggcacacgcctccgaactgcaggcgctcagg
tcgcggctggtaaggacggcccaggagcaggagaacagcctggaggccgcgcgcgccaag
ctcgaccagaccgaggaccagcacctggtggagatggaggatgccctgaacaagctgcag
gaggcggagacgaaggtaaaggacctggaggggttgcgggccatgtgtagtcagcaagcc
caagccctggccgacgccacggcgcagctggaggccacccaggagaagctcttgcagctc
gatgggctccggaaggccagttccgaaggtaaattggaaatggagaagctcaggcagcag
ctccaggtggctgagcagcagattcaggagttagagaatgcaaagcgggccgagagtggc
aaggccgatagcctggccgaggagctgcaggggaaggggctagcacttagtagccttcag
gagaacttgaacgaagccggccgagtgaaggaggctttggagaaagagcttcggagtttg
aaagaaaagttcgcagaggcttcagaagaggcggcctctgttcagaaaaacatgcaagaa
actgttgataacttacatgaaaaagaagaacagattaaggcgctgtcttctgaactggag
aagttgcgaggaaatttaacggatttggaggccaaattcaaagagagagatgtgcgagaa
gagcagttgacgaaggcaaaggccaagttggaaaacgacatcgcggacatcatgaaaatg
tccggggacaactcgtcacagctgacgaaaatgaatgatgagctacgcctgaaggagaga
tgtgtggaagaattacagctgcagctcctgaaggctaacgagcacgcggacctgctgcag
aagagcatcggtgaggccatgctcagggcagaacagagccagcaggaagcggccaggagg
cacgaggagaaggaggagctgcacaagaagctgtcggacctggaggagaaggtggacgtg
agccgcagccagtgccaggctctgcaggccgagcacgccaaggccagcgcggagagccag
gtgcagcacgaggaggcgctgcaggccctgcagaagctgctgctgcaggcggaggagaag
ctgcaggcagcgcaggcagagaacgggagcctgctgcgggaggtggccgagctgaagacg
caagccgacaaggccaagtcattaacttatttgttcacatcagccaaagaggaaattgag
ctgatgtcggaggagcgcagggccctgaggtcagagaagcaattgctggcgaaggagaag
ctctctctgaagtcagagagagggtcgtttctattgaagctcacagaagcggaggccaaa
aactcttcgctgcgggaagatcagaggaagctctggctgatgaaccaagcgattcgctta
gacaaagagaaggtcctcgaggccaggctggctgcagagaagctctgccagcaggagcgg
ctcggccgagaagcccttgaggcggagaaagagaaagtgctggaagagggcagggcggtg
caggaggagctccagagggtgggtgcggagaaggccgcgctgcaggtcgccaaggtgggg
ctgcaggccctggtggaggagctgcagattagcaagagcagcctggtggccgagtgtaag
aagggcctggaggagaggggccagctggaggagcatgtcaagaagctggttctggagaac
ctatccctggccaaggacaaggacaacatcatccagaagctgcagtgctcctacgaggag
ctggctcgggatcagaagtcgctggtgcaagagatagaggagctcacggccgagaagaag
tcggccctcgagaagcagtcggacctcgacagcctgtgcatggccctgaagctagagcgt
gatggcctggctcagagcaacaaggagctgcagctggagaaggacctgctgcgccaggaa
caggagaagctgggcgccagcctggaggcgtcactgcaggtcaaggagctgctgggggcc
gaggcaagctgcctgcgcacgcagctggaagaggccaccaaggccgtgcacaaggccgag
ctggaggcgctgcagacgcaggcggcaaacgccagccttgcgcggctgctggagcagatc
aagaccagccgggagatctccgactcggagtgcgtgcaactcctgcacgagaaggagacg
ctgagcctggccgagcggcggctggcggccgagaagaaggagctcctcggtgagaaggac
ctcctggcccagaagctcggccgctgctctgaggaggcggctcgcgtggagtcgtccctg
cgcgagcagctgaacagcctgagctccgagaaggagctgctgggccagaaggccaccaag
ctccagcggcagctggactggctgctgaaagaccaggcgctgctggaggcgcagcagacc
gagctgctggccgagcgggaagcgtccctgcaggccctgggcgagctgcagcagaagcac
gaggaggaggccgccaagcaccgggtggccgtccaagagaagatgaagctgctcggcgag
ctagacgtgctgcagcgggagctccaggagcagcgccaggagaaccaggggctagcggcc
agccagggcgccctcgaggcggcgctgcaggaggcccaggacgcggcccgcagcctggag
aagacacacgccagcgtgctgcaggccaaggaggcactcgacgccgagcggcaggaggag
tgccggcggctggcagaggacaggctcgcggcacagcaggccctggcgcaggagcgggag
gcccgcgcccaggagacccagacggccgcccacgaggccagccagctgcggggccgcctg
gggctgctggagcaggaggtggaggagctgcgggcgtgcgcgcaggggctgcaggccgag
cgcctggacctgctggaggaaaaggcgcggtcagaccagaaggtggccgagatcctgcgg
gagaaggagctgctgagcgtcgacgccgcccggttggctgccaacatcgaggccctcaag
ggcgacttcgcggccctgtccaagtccaagctggagctgcagggcctgcacagctgcctc
gccgagatcctggccgacctgcagcgcaagcatgaggcggccctggccgagcgggcccag
gccgggcaagagaacgagagcctgctggccgagaagagggagctgcagcaagagaggtcc
gagctcctacaagagaaggagcagctggccggcagttacttcctcctccagaaggaggtc
agtcagctggcccagaccagcagccacgtctcggccaacctcctggaggcccagaaggag
aaccgtgtgctgaggaaggacaagagcaagctcgcgtttaagatcagagagctcgagacg
ctgcagtcattcacggctgtgcagacggcagaagataacaggcagttcatggagcaaatg
accaaagagaagacagagaccctggcctccctggaggacaccaggaacaccaatgccaag
ttgcagagtgagttggatacccttaaggaaaacaacttgaagaatgtggaagagctgaac
aaatcgaaagagcttctgactatagagaatcaaaagatggaagaattcaagaaagaaata
gaaatcctgaggcaggcggccgcccagaactcacagcagctctcagccctgcaggaggag
aacgtgaaacttgccgaggagctgggccgcagccgggaccaggtcacgagccaacagaag
ctggaggaagagagatctgtgcttaataatcagttgttagaaatgaaaaagagagaatcc
gagttaataagagactccgatgaagagaaagcttccctgcagaaatccatcagtattacc
agtgccttgctcacggagaaggacgcagagctggagaagctgagaaatgaggtctctgtg
ctgaggggagaaaatgcctctgccaagtccttgcattcagttgttcaatccctggaatcc
gacaaggtgaagctcgagctcaaggtcaaaaacttggagcttcaactcaaagagaacaaa
aggcaactccagagctcggcaggtaattctgattctcaagcagatgaggatgaaagggcc
caggagaatcagattgatttcctgaattccgtgattgtggacctccaaagaaagaatcag
gacctcaagatgaaagtggagatgatgtccgaggcggctctcaacgggaatggggatgac
ctcaacaattacgatagtgacgaccaggagaagctggccaagaagaagcctcgcctcttt
tgtgacatctgcgactgctttgacctccatgacacagaggactgccccacgcagacacaa
gtgtccgaggaccccccacactccacacaccacggcaaccggggcgaggagcggccgtac
tgtgacatctgtgaggtgttcggacactggcccagtaactgcaacgacgacgagaccttc
tga
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