Sorex fumeus (smoky shrew): 130039583
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Entry
130039583 CDS
T10594
Symbol
NFRKB
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03082
ATP-dependent chromatin remodeling
Brite
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
130039583 (NFRKB)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130039583
NCBI-ProteinID:
XP_055987420
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Position
Unknown
AA seq
1304 aa
AA seq
DB search
MDSLDHMLTDPLELGPCGDGHGARIMEDCLLGSTRVSLPEDLLEDPEIFFDVVSLSTWRE
VLSDAQREHLQQFLPRFPEDGLDQQNQLILALFRGENFRFGNPLHIAQKLFRDGHFNPEV
VKYRQLCFRSQYKRYLSSQQQYFHRLLKQILASRSDLLETARRSGPTLSLRHRRASPSRA
PEVREWRAQQRYLKVLREVKEECGDTSLSSDEEATLDLQEKFSFEDLGSWLPGSPARSPS
PAVPLRVVPTLSTTDMKTADKIELGDSDLRTMLKKHHEKRKRQPDHPDLLTGDLTLSDIM
TRVNAGRKGSLAALYDLAVLKKKVKEKEEKKKKKIKIIKSEVEDLAEPLSGPERLAPLSQ
APSPLADPAIKEEPLEDLKPGLGINEISSSFFSLLLEILMLEGQASLPLLEERVLDWQSS
PASSLNSWFSAAPHWAELVLPALQYLAGESRAVPSSFSPFVEFKEKTQQWKLLGQSPDNE
KELAALFQLWLETKDQAFCKQENEDSSDATTPVPRERTDYVVRPSTGEEKRLFQEQEWHR
YSQPHKAFTFRMHGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAA
RLPNGEGTRAEICELLRDSQFLAPDVTSTQVNTVVSGALDRLHYEKDPCVKYDIGRKLWI
YLHRDRSEEEFERIHQAQAAAAKARKALQQKPKPPSKVKAGSKENVGKGLGCVAAEQSQL
SLSDSGLPPTPVTPATSTPPALPATPISPPPVVSTSKSCPGPEPAKSSSGVLLVSSPPMP
QLGAMLSPTASQTPPASQTAARVVGHSGPAGLPQVRVVAQPSLPATPQPSAGPTQALPPM
PPVPQIRAPAATTTQTKVVPQTVMATVPVKAPAASASGQRPGPALTVTSLPASTASPASK
PATSGPGTSAPSASTAAVIQNVTGQNIIKQVAITGQLGVKAQAGSSIPLTATNFRIQGKD
VLRLPPSSISTDAKGQTVLRITPDMMATLAKSQVTTVKLTQDLFGTGSGTVGKGISATLH
VHAADSPGKAGSASAPPSTPTGTTVVKVTPDLKPADPSSSAFRLMPALGVSVAEQKGKNT
VVAASDTKPAATIRIVQGLGVVPPKAGQTITVAAHAKPGSSVASASGTVHPSAVSLPSVN
ATVSKTVAVASGAASTPISIGPGAPAVRQVPVSTTVVSTSQAGKLPTRITVPLSVISQPM
KGKSVVTAPLIKGNLGANLGGLGRNIILTTMPAGTKLIAGNKPVSFLTAQQLQQLQQQGQ
ATQVRIQTVPAAHLQQGTAAGSSKAVSTVVVTTAPSPKQAPEQQ
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atggactccctggaccacatgctgacggaccccctggagctgggcccctgtggggacggc
cacggcgcccgcatcatggaggactgcctcctggggagcacgcgggtcagcctccccgag
gacctcctggaggatcccgagatattcttcgatgtggtcagtctgtccacgtggcgagag
gtcctgagcgacgctcagcgggagcacctccagcagtttctgcctcgctttcccgaggat
ggccttgaccagcagaaccagctcatcctcgctctcttccgcggggagaacttccgcttc
gggaaccctctgcacatcgcccagaagctctttcgagacggacacttcaaccccgaggtg
gtcaagtaccggcagctgtgcttcaggtcccagtacaagcgctacctctcctcgcagcag
cagtacttccaccggctgctgaagcagatcctggcctcgcggagcgacctcctggagacg
gcgcggcggagcggcccgaccctgtccctgcggcacaggcgggcgtcaccgtcccgcgcc
cccgaggtgcgggagtggcgcgcccagcagcgctacctgaaggtcctgcgggaggtgaag
gaggagtgtggggacacgtccctgtcgtcggacgaggaggccacgttggatttacaagaa
aaattttcttttgaagatcttggctcgtggctccccggctccccggcgcgttctcccagc
cccgcagtgcccctgcgggtggtgcccacactgtccactacggacatgaaaactgcagat
aaaatagagttgggagacagtgacttgaggacgatgctgaagaagcaccacgagaagcgg
aaacgccagcccgatcacccggatcttctgacaggggacctgaccctcagtgacatcatg
actcgggtcaacgctggcaggaagggctctctcgcagccctgtatgacttggctgtcctg
aaaaagaaggtgaaggagaaggaggagaagaagaagaagaaaataaaaatcatcaagtcc
gaggtggaggacctggcggagcccctcagtggcccggagcggctggccccgctgtctcag
gcaccctcgcccctggcggacccggccatcaaggaggagcctctggaagacctcaagcct
ggcctgggaatcaacgaaatctcttccagcttcttctctcttctcttggagatcttgatg
ctggagggacaggccagccttcccctgctggaggagcgggtgctggactggcagtcgtct
ccggccagctcactcaacagctggttctccgcagcccctcactgggccgagctggtgctg
cccgccctgcagtatcttgccggagaaagccgggctgtgccctccagcttctctccgttt
gttgagttcaaagaaaaaacccagcagtggaagttgcttggccagtccccggataacgag
aaggagctcgctgccctcttccagctgtggcttgaaaccaaagaccaggccttctgcaag
caagaaaacgaggacagctccgatgccacgacccccgtgccccgggaaagaaccgactac
gtggtgcggcccagcacgggggaggagaagcggctcttccaggagcaggagtggcaccgc
tacagccagccccacaaggccttcaccttccgcatgcacggcttcgagtcggtggtgggg
cccgtgaagggcgtgtttgacaaggagacgtcgctcaacaaggcgcgggagcactccctg
ctgcgctccgaccggcccgcctacgtcaccatcctgtccctggtccgggacgccgcggcc
cggctgccgaacggcgagggcacccgcgccgagatctgcgagctgctgagagactcccag
ttcctggcccccgacgtcaccagcacgcaggtgaacacggtcgtgagcggcgcgctggac
cggctccactacgagaaggacccctgtgtcaagtacgacatcggccgcaagctgtggatc
tacttgcaccgcgaccggagcgaggaggagttcgagcggatccatcaggcccaggctgcg
gccgcgaaggccaggaaggcccttcagcagaagcccaagccgccgtccaaggtgaaggcc
ggcagcaaggagaacgtggggaagggcctgggctgtgtggccgccgagcagagccagctg
agcctcagcgactcgggcctgccccccacccccgtcacccccgcgacgtccaccccgccc
gctctgcccgccacgcccatctcccccccgcccgtggtgtccaccagcaagagctgcccc
ggcccggagcctgccaagtccagctcaggcgtcctcctggtgtcctcgccacccatgccg
cagctcggagccatgctctccccgacggccagccagaccccgcccgcctcgcagacagcg
gcccgcgtcgtcggccactcgggcccggccgggctgccccaggtgcgcgtggtggcccag
cccagcctccctgccacgccacagccctcggcggggcccacgcaggcgctgccgccgatg
ccccccgtgccccagatccgggcccctgccgccaccaccacgcagaccaaagtcgtcccc
cagacagtcatggccacggttccggtcaaggccccggcggcatcggccagtgggcagcgg
cctgggcccgcgctcacggtgacaagccttcctgccagcaccgccagccccgccagcaag
cccgccacgagtgggccggggacgtctgcgccgagtgcgtccacggcagctgtcattcag
aatgtcacgggccagaacatcatcaagcaggtggcaatcactgggcagcttggtgtgaag
gcccaggcgggcagcagcattccgctcacggccactaacttccgcatccagggtaaggac
gtgttgcgtctgccgccctcttccatcagcaccgacgccaagggccagacggttctacgg
atcactccggacatgatggccacgctggctaagtcccaggtcaccacagtcaaactgacc
caggacctcttcgggacaggaagtggcactgtgggcaaaggcatctctgccaccctgcac
gtccacgcagcggacagccccggcaaggccggttcagccagtgcccctccgtccactcca
acaggtaccaccgtggtcaaggtgacgcctgacctcaagcccgcggacccctcaagctcc
gcgttccgcctgatgcccgccctcggtgtgagcgtggcagagcagaaggggaaaaatacg
gtggtcgctgcgtcggacaccaagcccgccgccaccatccgcatcgtgcagggcctgggc
gtggtgccccccaaggcgggccagaccatcacggtggccgcccacgccaagccgggctcc
tcagtggccagtgcctctgggactgtgcatccgtcggccgtgtccttgcccagcgtgaac
gccaccgtgtccaagacggtggctgtggcttcgggggcagccagcacccccatcagcatc
gggccgggagcccccgcggtccgccaggtcccggtcagcaccacggttgtgtccacgtca
caggctgggaagctgccgacgcggatcacggtgccgctctcggtcatcagccagcccatg
aagggcaagagcgtggtcacagcccccctcatcaagggcaacctcggcgccaacctcggc
ggcctgggccgcaacatcatcctgaccactatgcccgcggggaccaagctcatcgcgggc
aacaagcccgtcagcttcctcacggcgcagcagctgcagcagctacagcagcaaggccag
gccacccaggtgcgcatccagaccgtccccgcagcccacctgcagcagggcaccgcggcg
ggctcctccaaggccgtctccaccgtggtggtgaccacggccccgtccccgaaacaggcg
cccgagcagcagtga
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