Sorex fumeus (smoky shrew): 130039613
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Entry
130039613 CDS
T10594
Symbol
CTDP1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sfum01009
]
130039613 (CTDP1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfum03021
]
130039613 (CTDP1)
Enzymes [BR:
sfum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
130039613 (CTDP1)
Protein phosphatases and associated proteins [BR:
sfum01009
]
HAD phosphatases
Fcp/Scp phosphatases
130039613 (CTDP1)
Transcription machinery [BR:
sfum03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
130039613 (CTDP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
BSH_Fcp1
NIF
PTCB-BRCT
BRCT
RTT107_BRCT_5
LIG3_BRCT
BSH_CusB
Motif
Other DBs
NCBI-GeneID:
130039613
NCBI-ProteinID:
XP_055987463
LinkDB
All DBs
Position
Unknown
AA seq
907 aa
AA seq
DB search
MEAPGAARAAVAEVRCPGPGPLRLSEWRVAAGAAVRIGSVLAVCEAAASAPPSGLGPGRA
AAERRLRSERAGVVRELCAQPGQLLAPGAVLLRLEECSHPVVMKGLCAECGQDLTQLQSK
NGKQQVPLSTATVSMVHSVPELMVSSEQAEQLGREDQQRLHRNRKLVLMVDLDQTLIHTT
EQHCQHMSSKGIFHFQLGRGEPMLHTRLRPHCKEFLEKIARLYELHVFTFGSRLYAHTIA
GFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDREDVWKFAPNLITV
KKYVYFQGTGDIHAPPAPREPPARRRVNHSPKGTDAPEPVLSGRDSEEGRHVSGVEQSNG
LGKPPRDWPAPAQTEERGPRPSPRADRGPPACPPQQGRTPAEERPPQGPAGGDLHFELSS
DSASSSESEGRSSSASEGEGGEPRSRRQPPAARGKAALPGSGEKPAGPNHCGDAAAADGL
EEGERDGLGGGCAETESQNSEQSGITVGESLDQSVEEEEEEEDADADDHLVYLEEILARV
HSDYYAKYDRFLQGDLPEAPDIRKIVPELKSKVLADVAILFSGLHPTNFPIEKTREHYHA
SALGARILTQLVLDPDDPDRPTHLVAARAGTEKVRQAQECGQLHVVNPDWLWSCLERWDH
VEEQLFPLRDDYGRAQREDSPAAFPDRQGAPPPALFHPTPVHPRVQPGPELRIYDANTGK
LIRKGAAGPGPPGSLPVHGEHSSFRVVQPPQQQMFGEELPENQDGPQPGPSRRKRQPSLS
ETLPLYTLCKEDLESMDKEVDDILGEGSDDSDSEKRRPEEGPERSPEPREAPAAGAPKGH
PVLCATSCDKNMADGRGPRGHKRKLTEAEAASGSSGESSCEDEDEEGSSSEADEMAAALE
AELSDLM
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgccgggcgccgcgcgggcggccgtggccgaggtgcgctgcccgggccccggg
ccgctgcgcctgagcgagtggcgggtggcggcgggcgcggccgtgcgcatcggctcggtg
ctggccgtgtgcgaggccgccgcctccgcgccgccctccgggctcgggcccggccgcgcg
gccgccgagcgcaggctgcggtcggagcgcgccggcgtggtgcgggagctgtgcgcgcag
ccgggccagctgctggcgccgggggcagtcctgctgcggctggaagaatgcagccacccg
gtggtcatgaagggcttgtgcgcggagtgtggccaggacctgacgcagttgcagagcaaa
aacgggaagcagcaagtgcctctgtccacggccaccgtgtccatggtgcacagcgtcccc
gagctgatggtgagctcggagcaagcggagcagctcgggagggaggatcagcagcgtctg
caccggaaccgcaagctggtgctcatggtggacctggaccagaccctgatccacaccacg
gagcagcactgccagcacatgtccagcaagggcatcttccacttccagctgggccggggc
gagcccatgctgcacacccgactgcggccacactgcaaggagttcttggagaagatcgcc
aggctgtacgagctgcacgtcttcacctttggcagcaggctgtacgcgcacacaatcgca
ggctttttagatcccgagaagaagcttttttctcaccggatcttgtcaagggatgaatgt
atcgatccgttttctaaaacaggcaacctcagaaacctcttcccatgtggcgattccatg
gtctgcatcattgacgaccgagaagatgtctggaagtttgcccccaacctgataacggtg
aagaaatacgtgtacttccagggcacgggcgacatccacgctccccctgccccccgggag
ccccctgcccgcaggagagtgaatcattctcccaagggcaccgacgccccagaacccgtc
ttgtccggcagagactctgaggagggaaggcacgtgtctggggtggagcagagtaacggc
ctcgggaaacccccgagggactggcccgcccctgctcagacggaggagcggggcccgcgg
cccagtcctcgtgccgacaggggccccccggcctgccccccgcagcagggccggacgccg
gcagaggagcggcccccccagggcccggcgggcggcgacctgcactttgaactgtccagc
gacagcgcgagcagcagcgagtcggagggccgctcgtcctccgcctccgagggcgagggc
ggggagcctaggagccgccggcagcccccggctgcgcgcgggaaggcggccctgcctggc
agcggggagaagccggcagggcccaaccactgtggcgacgcggccgcggccgacgggctg
gaggagggcgagcgggacgggctgggcgggggctgcgcggagaccgagtcccagaacagc
gagcagtcgggcatcacggtgggcgagtccctggaccagagcgtggaggaggaggaggag
gaggaggacgccgacgctgacgaccacctggtctacctcgaggagatcctggcccgcgtg
cactctgactactatgccaagtacgaccgcttcctccagggagacctcccagaggccccc
gacatccggaagatcgtccccgagctcaagagcaaggtgctggcggacgtggccatcctc
ttcagcgggctgcaccccaccaacttccccatcgagaagacccgggagcactaccacgcc
tcggccctaggcgccaggatcctcactcagctggtgctggaccccgacgaccccgacagg
cccacccacctggtggccgcccgggctggcacagagaaggtgcggcaggcgcaggagtgt
gggcagctgcacgtcgtcaaccccgactggctgtggagctgcctggagcgctgggaccat
gtggaagagcagctcttccccctcagggacgactacggccgggcacagagggaggacagc
cctgcggcctttcctgacaggcagggcgcgccgcccccggccttgttccacccgaccccc
gtccacccccgggtgcagcctggccccgagctccgcatctacgacgccaacacgggcaag
ctcatccggaagggcgctgccggccccgggccccccggctccttgcctgtccacggagaa
cactcgtccttcagagttgtccagccacctcagcagcagatgttcggtgaagagctacca
gaaaaccaggacggaccacagccaggcccttccaggaggaaaagacagcccagcctgtcg
gaaacgctgccgctgtacacgctgtgtaaggaggacctagaaagtatggacaaagaggtg
gacgacatcctgggagaaggcagtgatgacagcgacagtgagaagaggaggccagaggag
ggtcccgagcggagccctgagcccagggaggccccggctgcaggggcccccaaggggcac
cctgtgctgtgtgccacatcctgcgacaagaacatggcagatggacgtggacccagaggc
cacaagaggaagctgacggaggccgaggcagccagtgggtcgagcggggagtccagctgc
gaggacgaggacgaagagggcagcagctcggaggcggacgagatggcggccgcgctggag
gcggagctcagcgacctcatgtga
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