Sorex fumeus (smoky shrew): 130039725
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Entry
130039725 CDS
T10594
Symbol
IRF7
Name
(RefSeq) LOW QUALITY PROTEIN: interferon regulatory factor 7
KO
K09447
interferon regulatory factor 7
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04620
Toll-like receptor signaling pathway
sfum04621
NOD-like receptor signaling pathway
sfum04622
RIG-I-like receptor signaling pathway
sfum04623
Cytosolic DNA-sensing pathway
sfum05160
Hepatitis C
sfum05161
Hepatitis B
sfum05162
Measles
sfum05164
Influenza A
sfum05167
Kaposi sarcoma-associated herpesvirus infection
sfum05168
Herpes simplex virus 1 infection
sfum05169
Epstein-Barr virus infection
sfum05203
Viral carcinogenesis
sfum05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
130039725 (IRF7)
04621 NOD-like receptor signaling pathway
130039725 (IRF7)
04622 RIG-I-like receptor signaling pathway
130039725 (IRF7)
04623 Cytosolic DNA-sensing pathway
130039725 (IRF7)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
130039725 (IRF7)
09172 Infectious disease: viral
05161 Hepatitis B
130039725 (IRF7)
05160 Hepatitis C
130039725 (IRF7)
05164 Influenza A
130039725 (IRF7)
05162 Measles
130039725 (IRF7)
05168 Herpes simplex virus 1 infection
130039725 (IRF7)
05167 Kaposi sarcoma-associated herpesvirus infection
130039725 (IRF7)
05169 Epstein-Barr virus infection
130039725 (IRF7)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
130039725 (IRF7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfum03000
]
130039725 (IRF7)
Transcription factors [BR:
sfum03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
130039725 (IRF7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
130039725
NCBI-ProteinID:
XP_055987575
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MALRPERWAPRPRAPRRLRFGDWLLREVSSGRYDGLRWLDAARTRFRVPWKHFGHKDLSE
ADARIFKAWAVARGRWPPGGPGSADRWAPESAHRAGWKTNFRCALTSTRRFVMLQDNSGD
QRDPHKVFGLSPEAGCRGPSVPAEALPAAAPPAREALPCPGQAEAREPPEARAPSAPAGP
FLQAVPQGSLQAHLLDAAAWVAPPAPTAEDLDLPWVADVAPPCRPLPQVPLAGPAPVPEP
WPLAVAPGTVPSTAAGAAEPLAGPWGSGVHLPAQLGVLDVTIMYKGRTVLQEVVSRPSCV
LLYGDPGPAAPESQCVAFPSPAELADQKQLAYTEQVLRHVEPGLQLELRGPELRARRRGK
CKVYWELGGPPGSSSPPTPPQLLERNSDTPIFDFSYFYQELLEFRAQRGGSPRCTIYLGF
GQDLSARRPKEKHLVLVKLEPRLCRALLEAAQREGASSLDSGNLGLCLSSGNSLFEDLEQ
LLMELGQPA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggccctgcgccccgagaggtgggccccgcggccccgcgccccccgccggctgcgcttc
ggggactggctcctgcgcgaggtgagcagcggccgctacgacgggctgcgctggctggac
gccgcccgcacgcgcttccgcgtgccctggaagcacttcgggcacaaggacctgagcgag
gccgacgcgcgcatcttcaaggcctgggccgtggcgcgcgggcgctggccgcccggcggc
cccggcagcgctgaccgctgggcgcccgagagcgcgcaccgcgccggctggaagaccaac
ttccgctgcgcgctgaccagcacgcgccgcttcgtgatgctccaggacaactccggggac
cagagggacccgcacaaagtcttcgggctcagcccggaggcgggctgcagagggccgagc
gttcccgcggaggcgctccccgccgcggcgccccccgcccgggaggcgctgccctgtcca
ggccaggccgaggcgcgggagccgccggaggcccgcgcccccagcgcccccgcaggcccc
ttcctccaggcagtgccgcagggcagcctgcaggcccacctgctggatgccgccgcgtgg
gtggcgccgccggcgcccactgctgaggatctggacctgccctgggtagcggacgtggcc
cccccctgcaggcccctgccccaggtcccgctggcaggccccgccccggtcccggagccc
tggcccctggcagtggcccccggcacagtgccctccacagcagcgggggccgcggagccg
ctggccgggccctggggctccggggtgcacctgccggcccagctgggagtcctggacgtg
accatcatgtacaagggccgcacggtgctgcaggaggtggtgagtcggcccagctgtgtc
ctcctgtacggggaccccggcccggctgcccccgagtcccagtgcgtggccttccccagt
cccgccgagctggccgaccagaagcagctggcgtacaccgagcaggtgctgcggcacgtg
gagcccggcctgcagctcgagctgcgggggccggagctgagggcgcggcgccggggcaag
tgcaaggtgtactgggagctgggggggcccccgggctccagcagcccccccacgcccccc
cagctgctggagcgcaactccgacacccccatcttcgacttcagctacttctaccaagag
ctgctggagttcagggcccagcgcgggggctccccccgctgcaccatctacctcggcttc
gggcaggacctgtcggcccgcaggcccaaggagaagcacctggtgctggtgaagctggaa
cccaggctgtgccgggcccttctggaggccgcgcagcgcgaaggcgcgtcctcgctggac
agcggcaacctcggcctctgcctgtccagtggcaacagcctgttcgaggacctggagcag
ctgctcatggagctgggccagcccgcctag
DBGET
integrated database retrieval system
