Sorex fumeus (smoky shrew): 130039743
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Entry
130039743 CDS
T10594
Symbol
DPF2
Name
(RefSeq) zinc finger protein ubi-d4 isoform X1
KO
K13196
zinc finger protein ubi-d4
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130039743 (DPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfum03041
]
130039743 (DPF2)
03036 Chromosome and associated proteins [BR:
sfum03036
]
130039743 (DPF2)
Spliceosome [BR:
sfum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
130039743 (DPF2)
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
130039743 (DPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHDvar_NSD
zf_RING_Vps8
PHD_4
Lar_restr_allev
zf-C2H2
zf-C2H2_4
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
130039743
NCBI-ProteinID:
XP_055987598
LinkDB
All DBs
Position
Unknown
AA seq
416 aa
AA seq
DB search
MAAVVENVVKLLGEQYYKDAMEQCHNYNARLCAERSVRLPFLDSQTGVAQSNCYIWMEKR
HRGPGLASGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDTDQTLKKEGLISQDGSSLE
ALLRTDPLEKRGAPDPRVDDDSLGEFPVTNSRARKRILEPDDFLDDLDDEDYEEDTPKRR
GKGKSKGKGVGSARKKLDASILEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEGED
KEDSQPPTPVSQRAEEQKCKLRGQGRGLLPSGAGGFRALALPAAKKGPDGLALPNNYCDF
CLGDSKINKKTGQPEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGT
SENDDQLLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLCLDLLKEKASIYQNQHSS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtggtggaaaatgtagtgaagctcctgggggagcagtactacaaggatgcc
atggagcagtgccacaactacaatgcccgcctctgtgccgagcgcagcgtgcgcctgccg
ttcctggactcacagacgggagtcgcccagagcaactgttacatctggatggagaagcgg
catcgtggtccaggattagcttcggggcagctgtactcctacccggcccgacggtggcgg
aaaaagcggcgagcccaccctcctgaagacccaagactttccttcccatctattaaacca
gacacagaccagaccctgaagaaggaggggctcatctctcaggatggcagtagtttagag
gcattgctgcgcacggaccccctggagaagcgaggtgccccggatccccgagtggacgac
gacagcctgggcgagttccctgtgaccaacagtcgagcgcggaagcgcatcctagaaccg
gatgatttcctcgacgaccttgacgatgaggactatgaagaagacactccgaagcgccgg
ggcaagggcaaatccaagggtaaaggcgtgggcagtgcccgcaagaagctggacgcttcc
atcctggaggaccgggacaagccctatgcctgcgacatttgtgggaagcgctacaagaac
cggccgggcctcagctaccactacgcgcactcgcacctggctgaggaggagggcgaggac
aaggaggactcgcagccgcccaccccggtctcccagagggccgaggagcagaaatgtaag
ctgcggggccagggcaggggcctgctgccaagtggcgcaggtggcttcagagctctcgct
ctccccgcagccaagaagggccccgatggcttggccctgcccaacaactactgcgacttc
tgcctgggcgactccaagatcaacaagaagacggggcagcccgaggagctggtgtcctgc
tccgactgtggccgctcagggcacccgtcttgcctgcagttcacgccggtgatgatggcg
gcggtgaagacctaccgctggcagtgcatcgagtgcaagtgctgcaacatctgcggcacc
tccgagaacgacgaccagctgctcttctgtgacgactgtgaccgcggctaccacatgtac
tgtctcactccgtccatgtcggagcctccggaagggagctggagctgccacctgtgtctg
gacctgctgaaggagaaagcgtccatctaccagaaccagcactcctcctga
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