Sorex fumeus (smoky shrew): 130039825
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Entry
130039825 CDS
T10594
Symbol
ATG2A
Name
(RefSeq) autophagy-related protein 2 homolog A
KO
K17906
autophagy-related protein 2
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04136
Autophagy - other
sfum04140
Autophagy - animal
sfum05010
Alzheimer disease
sfum05014
Amyotrophic lateral sclerosis
sfum05016
Huntington disease
sfum05017
Spinocerebellar ataxia
sfum05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130039825 (ATG2A)
04136 Autophagy - other
130039825 (ATG2A)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
130039825 (ATG2A)
05014 Amyotrophic lateral sclerosis
130039825 (ATG2A)
05016 Huntington disease
130039825 (ATG2A)
05017 Spinocerebellar ataxia
130039825 (ATG2A)
05022 Pathways of neurodegeneration - multiple diseases
130039825 (ATG2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfum04131
]
130039825 (ATG2A)
03029 Mitochondrial biogenesis [BR:
sfum03029
]
130039825 (ATG2A)
Membrane trafficking [BR:
sfum04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
130039825 (ATG2A)
Mitochondrial biogenesis [BR:
sfum03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
130039825 (ATG2A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
130039825
NCBI-ProteinID:
XP_055987729
LinkDB
All DBs
Position
Unknown
AA seq
1925 aa
AA seq
DB search
MSRWLWPWSNCVKERVCRYLLHHYLGHFFQEHLSLEQLSLDLYKGSVALRDIHLENWSVN
EVLESVESPLELVEGFVGAIEVAVPWAALLTDHCTVRVSGLQLTLQPRRPGPGPGAAEWQ
STTSRMTTSMQLAQECLRDELPQPSEPPQPLEGLEMFAQTIETVLRRVKVTFLDSVVRVE
HQPGDREHGMALEVHVQRLEYCDEAVREPGQAPPVDMHQPPAFLHKLLQLAGVRLHFEEL
PAQEDPPASPLQIGSCSGYMELTVKLKQNEAFPGPKLEVAGQLGSLHLLLTPRQLQQLQE
LLGAMNLPDTPGLADKLNKSRPLGAEDLWLIEQDLNQQLQAGAEPLSPDPLNPLVSLDST
DLFFSMTGLTSSAISAVSDLSLSDVDLASSMRSEASSTRRLSTQARPVGKPAPAPLPDTL
RPDSLLKMTLGGMTLTLLQTSAPASGPPDLATHFFAEFEATKDGPFGSRDFHHLRPRFQT
ACPCSHVRLTGTAVQLSWELRTGRGRRTTSSDIHFGQLEVLECLWPRGAQEPEYTEILSF
PGKASSQASARPCAHLRHTQTLRRVSKSRPQRPAACHCHSELALDLAPFQADVELGVLHR
LTVLLRQASVPPTEPPPTGLLTETPPAPEQQTVVRLSAPRATLRLRFPIADLRPERDPWA
GRGFRAEQLQLELTEPQFRSELSSGPGPPAPTRLELTCSDLHGTYKDGDKPPVPCLRASK
APDPENPGGKCFFPQVVVTLHPQLSSTQWEAVPERAEELALSAESPCELGEPEPSPFSAK
RTMYETEEMVIPGDAEEMRAFQNRALALSRCCLELLLPNAHIFLPSKDFYESLYNRINND
LLMWEPPDLLPGAPSPAQPPGDQDPSGFWSDHFKMCKSAFKLDSDSEEDDAPFVSARAPS
GPQPPTPEAPPGPHAQSSFSTLVTVLKGRVTVLCDTKDEAGRRLEAAHGELVLDVERGRL
FNVAQYRGQPGLGYFCLEAEKAALYHRAAVDDYPLPSQLELPSSAPPAQLAATIYPSEEG
VVERGASGRKGQGRAPNMLSTAVRIHLDPHKNIKEFLVTLRLYRATLRHRTALPGQSWYS
QLLEFLDVLDDPILGYLPPTVITVLHTHLLSCAVDYRPLYLPVRVLLTAESFSLSSNIIM
DTSTFLLRFILDDSALYLSDKCEVESLDLRRDYVCVLDVDLLELVIKTWKGDTEGKLTQP
RFELRCSNNVVHVHSCADSCALLVNLLQYVTSSGDLHPPARPPSPTEIAGQKVQLSESPA
SLPTCPPVETAIINQRDLADALLDPERGLQELAQPSGGPLPRASPVSVYLFPGERSGAQP
PTSPGGDPTGSCREPQEEEKEEEADGDTLDSDEFCILDAPGLGIPPRDGEPVVTQLQPGP
IVVQDGHFSRPLGSTDLLRAPAHFPMPCTRVALREVSLVWHLYGGRDFGAHPSHRTRVGL
GAHRGSPSRSSGANRPQNSWRTQGGSGRQHHVLMELQLSKMSFQHEVYPAEPPTEPPAGP
GRELEERPLSRQVFIVQELEVRDRLAASQINKFLHLHTSEHMPRRAHSNMLTIKALHVAP
ATNLGGPECCLRVSLMPLRLNVDQDALLFLRGFFSSLAAGIHPLVPVDVCAEAHPEAQVQ
PRDGQPEGAETSGAPEAAHGTPSTEQQPIYFREFRFTSEVPIWLDYHGKHVTMDQVGTFA
GLLIGLAQLNCSELKLKRLCYRHGLLGVDKVLGYALNEWLQDIRRNQLPGLLGGVGPMHS
VVQLFQGFRDLLWLPIEQYRKDGRLMRGLQRGAASFGSSTASAALELSNRLVQAIQATAE
TVYDILSPAVPVSRSLQDKRSGRRLRRGQQPADLREGVAKAYDTVREGILDTAQTICDVA
SRGHEQKGLTGAVGGVIRQLPPTVVKPLILATEATSSLLGGMRNQIRPDAHKDQALKWRS
DETQD
NT seq
5778 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgatggctgtggccgtggtcgaactgtgtgaaagagcgagtgtgccgctacttg
ctgcaccactacttgggtcacttcttccaggagcacctcagcctggagcagctgagtctc
gacctgtacaagggcagcgttgccctgcgggacatccacttggagaactggtcggtgaac
gaggtcctggagtctgtggagtcacccctggagctggtggaaggcttcgtgggcgccatc
gaggtggccgtaccctgggccgcgctgctcaccgaccactgcacggtgcgtgtgtccggc
cttcagctcaccctgcagccccgccggcccggcccagggcctggggcggctgagtggcag
agcacaacgtcccgcatgaccaccagcatgcagctcgcccaggagtgtctgcgagatgag
ctgccccagccgtcagagccgccgcagcccctggaggggctggagatgtttgcccagacc
atcgagactgtgctgcgcagagtcaaggtgactttcctggactctgtggtcagggtggag
caccagcccggggaccgggaacacggcatggccttggaagttcatgtgcaaagactggag
tactgtgacgaggcggtgcgggagcccgggcaggcgccccccgtggacatgcaccagccc
cccgccttcctgcacaagctgctgcagctggcgggggtccgcctgcactttgaggagctc
cccgcacaggaggacccccccgcgtcccccttgcagattgggagctgctcggggtacatg
gagctgacagtgaagctgaagcagaacgaggccttcccgggccccaagctggaggtggcc
ggacagctgggctcgctgcacctgctcctcaccccacgacagctacagcagcttcaggag
ctgctgggcgccatgaacctcccagacaccccaggcctggccgacaagctgaacaagagc
cgcccgctgggggccgaggacctgtggctgatcgagcaggacctgaaccagcagctgcag
gcgggggcagagcccctcagccccgaccccctcaaccccctcgtcagcctggacagcact
gacctcttcttctccatgaccggcctcacgagcagcgccatatccgccgtgtctgacctg
tccctctccgacgtggacctggcatcctccatgcgcagtgaggccagcagcacccgccgt
ctctccacccaggcccgccccgtcggcaagccggctcctgcacccctcccggacaccctg
cgccctgactcactgctaaagatgaccttgggggggatgaccctgaccttgctccagaca
tcagccccggcttccggcccgcctgacctcgccacacatttctttgccgagttcgaagcc
accaaggatgggccctttggttcccgcgacttccaccaccttcgcccacgcttccagacg
gcctgtccctgcagccacgtccggctgacgggcacggccgtgcagctgtcctgggagctg
cggacgggccggggccggcgcaccaccagctcggacatccacttcgggcagctcgaggtg
ctggagtgtctgtggcccaggggcgcccaggagcccgagtacaccgagatcctgagcttc
ccgggcaaggcgagctcccaggcctcagcccggccctgtgcccaccttcgtcacacgcag
acgctgcgccgcgtgtccaagagccgcccccagcgccccgcagcctgtcactgccactcg
gaactggccctggacctggcccccttccaggcggacgtggaactgggggtcctgcaccgg
ctcacggtcctgctgcgtcaggccagcgtcccccccacggagcctcccccgacgggtctg
ctgaccgagaccccgccggcccccgagcagcaaaccgtggttcgcctctctgccccccgg
gccaccctgcggctgcgtttccccatcgccgacctgcggcctgagcgcgacccctgggcc
ggccgcggcttccgggccgagcagctgcagctggaactgactgagccccagttccgctcg
gagctgagcagcgggcccggccccccggcccccacccgactggagctcacctgctccgac
ctgcacggcacctacaaggacggagacaagcccccggtcccctgcctgcgcgcctccaaa
gccccggaccccgagaaccccgggggcaagtgcttctttccccaggtagtggtgaccctg
cacccccagctcagcagcacacagtgggaggcggtgcctgagagggccgaggagctggcg
ctgtcggccgagagcccctgtgaactgggggagcccgagccctcgcccttctcggccaag
cggaccatgtacgagacggaggagatggtgatccccggggacgccgaggagatgcgggct
ttccagaaccgagcgctggccctgtcccgctgctgcctggagctgctgctgcccaatgcc
cacatcttcctgcccagcaaggacttctacgagagcctctacaacaggatcaacaacgac
ctgctcatgtgggagcccccagacctgctgcccggcgccccgtcccccgcccagccccca
ggcgaccaggacccctcgggcttctggagcgaccacttcaagatgtgcaagtcggccttc
aagctggactcagactctgaggaggacgacgccccttttgtctccgcacgggcaccctcc
ggcccgcagccccccacccctgaggccccgccgggccctcatgcccaaagttctttctcc
acgctggtgacggtgctgaaggggcgggtcactgtactctgcgacaccaaggatgaggcc
gggaggcgcctggaggccgcacacggggagctggtgctagacgtggagcgaggccgcctg
ttcaacgtcgcccagtaccgcggccagccaggcctcggctacttctgcctggaggccgag
aaggccgctctctaccaccgagcggctgtggacgattacccgctgcccagtcagctggag
ctgcccagctccgcgcccccggcccagctggccgccaccatctacccgtcggaggaaggc
gtggtggagcgcggagcctcggggcgcaaggggcaggggcgggcccccaacatgctgtcc
accgccgtgcgcatccacctggacccccacaagaacatcaaggagttcctggtcacgctg
cggctgtaccgcgccaccctgcgccaccgcacggccctgccaggacagagctggtactcg
cagctgctggagttcctcgacgtgctggacgaccccatcctgggctacctgcccccgacg
gtcatcacggtgctgcacacacacctgctgtcctgcgctgttgactacaggcccctctac
ctccccgtgcgtgtgctcctgaccgccgagagcttctccctgtccagcaatatcatcatg
gacacgtccaccttcctgctcaggttcatcctggacgactcggccttgtacctgtctgac
aagtgtgaggtggagagcctggacctgaggcgagactacgtctgcgtgctggatgttgac
ctgctggagctcgtgatcaaaacctggaagggggacacggagggcaagctgacccaaccg
cgcttcgagctccgctgctccaacaacgtggtgcacgtgcacagctgtgccgactcctgt
gcgctgcttgtcaacctgctgcagtatgtcaccagctcgggcgacctgcaccccccggcc
cggccccccagccccacggagatcgccggccagaaggtgcagctgtcggagagccccgcc
tcgctgcccacctgcccaccggtggagacggccatcatcaaccagcgggacctggccgac
gccctcctggaccccgagcgcggcctgcaggagctggcccagccctcaggcggccccctg
cctcgggcctcgcccgtgtcggtctacctgttcccgggtgaacggagcggggcccagccc
cccaccagcccagggggcgaccccacgggatcctgccgcgagccccaggaagaagaaaag
gaagaggaggcggacggagacacgctggacagtgacgagttctgcatcctggacgcccct
ggcctgggcatcccgccccgggacggggagcccgtggtgacgcagctgcagccaggcccc
atcgtggtgcaggacggccacttctcgcggccgctgggcagcaccgacctgctgcgggcg
ccggcccacttcccgatgccctgcacccgcgtggcgctgcgcgaggtgtcgctcgtctgg
cacctctacggcggccgggacttcggcgcccaccccagccaccggacgagagttggcctc
ggggcccaccggggctccccttcccgcagctcgggcgccaaccggccccagaactcctgg
cggacccaggggggcagcgggaggcaacaccacgtgctcatggagctccagctcagcaag
atgagctttcagcacgaggtgtacccggccgagccccccaccgagccccccgccggcccg
ggccgggagctggaggagcggccgctgtcccgccaggtgttcatcgtgcaggagctggag
gtccgcgaccgcctggcggcctcccagatcaacaagttcctgcacctgcacacgagcgag
cacatgccccggcgcgcccactccaacatgctcaccatcaaggcgctgcacgtggccccc
gcgaccaacctggggggccccgagtgctgtctgcgggtctcgctgatgccgctgcggctc
aacgtggaccaggacgcgctgctcttcctcaggggtttcttctccagcctggcggccggc
atccaccccctggtccccgtggacgtgtgtgcggaggctcacccagaagcccaagtccag
ccccgggatgggcagcctgagggcgccgagacttcgggggcccccgaggctgcccacggc
accccatccacggagcagcagcccatctacttcagggagttccgcttcacgtccgaggtg
cccatctggctggactaccacggcaagcacgtcaccatggaccaggtgggcaccttcgcc
ggcctcctcatcggcctggcccagctcaactgctccgagctgaagctgaagcgactgtgt
taccggcacgggctgctgggcgtggacaaggttctgggctacgcgctcaacgagtggctg
caggacatccgccggaaccagctgcccggcctgctgggcggcgtgggccccatgcactcg
gtggtccagctcttccagggcttccgggacctgctgtggctgcccatcgagcagtaccgc
aaggacggtcgcctcatgcgggggcttcagcgcggcgccgcctccttcggctcgtccacg
gcctccgccgccctggagctcagcaaccggctggtgcaggccatccaggccaccgccgag
accgtctacgacatcctgtcgcctgcagttcccgtgtcgcgctcgctccaggacaagcgc
tcaggccggaggctgcggaggggccagcagcctgctgacctccgggagggcgtggccaag
gcctacgacactgtccgtgagggcatcctggacaccgcccagaccatctgcgacgtggcg
tcgcggggccacgagcagaaggggctgacgggcgccgtgggcggcgtgatccgccagctg
ccccccacagtggtgaagcccctcatcctggccacggaggccacgtccagcctgctgggt
gggatgcgcaaccagatccgccccgacgcgcacaaggaccaggcgctcaagtggcgctcg
gacgagacgcaggactga
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integrated database retrieval system
