KEGG   Sorex fumeus (smoky shrew): 130039851
Entry
130039851         CDS       T10594                                 
Symbol
CAPN1
Name
(RefSeq) calpain-1 catalytic subunit
  KO
K01367  calpain-1 [EC:3.4.22.52]
Organism
sfum  Sorex fumeus (smoky shrew)
Pathway
sfum04141  Protein processing in endoplasmic reticulum
sfum04210  Apoptosis
sfum04217  Necroptosis
sfum04218  Cellular senescence
sfum04382  Cornified envelope formation
sfum05010  Alzheimer disease
sfum05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:sfum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    130039851 (CAPN1)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    130039851 (CAPN1)
   04217 Necroptosis
    130039851 (CAPN1)
   04218 Cellular senescence
    130039851 (CAPN1)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    130039851 (CAPN1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    130039851 (CAPN1)
   05022 Pathways of neurodegeneration - multiple diseases
    130039851 (CAPN1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:sfum01002]
    130039851 (CAPN1)
Enzymes [BR:sfum01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.52  calpain-1
     130039851 (CAPN1)
Peptidases and inhibitors [BR:sfum01002]
 Cysteine peptidases
  Family C2: calpain family
   130039851 (CAPN1)
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III EF-hand_6 EF-hand_1 EF-hand_8 EF-hand_7 CAPN13-like_C_EFh EF-hand_5
Other DBs
NCBI-GeneID: 130039851
NCBI-ProteinID: XP_055987767
LinkDB
Position
Unknown
AA seq 714 aa
MAEEIIQPVYCTGVSAQVQKQRAKELGLGRHENAIKYLGQDFEQLRAQCLQSGALFRDDA
FPPIAQSLGFKELGPNSSKTYGIRWKRPTEMLSNPQFIVDGATRTDICQGALGDCWLLAA
IASLTLNDTLLHRVVPHGQSFQDGYAGIFHFQLWQFGEWVDVVVDDLLPTKDGKLVFVHS
AQGNEFWSALLEKAYAKVNGSYEALSGGSTSEGFEDFTGGVTEWYELRKAPSDLYQIILK
ALERGSLLGCSIDISSVLDMEAITFKKLVKGHAYSVTGAKQVNYQGQMVNLIRMRNPWGE
VEWTGAWSDGSMEWNNVDPYEREQLRIKMEDGEFWMSFRDFMREFTRLEICNLTPDALKS
RSIRKWNTTLYEGTWRRGSTAGGCRNYPATFWVNPQFKIRLEEVDDPDDDCGGREDGCSF
VLALMQKHKRRERRYGRDMETIGFAVYEVPPELVGRPVHLKRDFFLANSSRARSEQFINL
REVSTRFRLPPGEYVVVPSTFEPNKEGDFVLRFFSEKSAGTQELDDQIQANLPDERVLSE
EEIDDNFKTLFRQLAGEDLEISVKELRTILNRIISKHKDLRTKGFSLESCRSMVNLMDRD
GNGKLGLVEFNILWNRIRNYLAIFRQFDLDKSGSMSAYEMRMAIEAAGFKLNKKLYELII
TRYSEPDLAVDFDNFVCCLVRLETMFRFFKALDTDLDGVVTFDLFKWLQLTMFA
NT seq 2145 nt   +upstreamnt  +downstreamnt
atggcggaggagatcatccagcccgtgtactgcaccggggtgtcggcgcaagtgcagaag
cagcgggccaaggagctgggcctgggccgccatgaaaacgccatcaagtacctgggccag
gatttcgagcagctgcgggcccagtgcctgcagagcggggccctcttccgagatgacgcc
ttcccccccatagcccagagcctgggcttcaaggagctgggccccaactcctccaaaacc
tatggcatccggtggaagcgccccacggagatgctgtcaaacccgcagttcatcgtggat
ggagccacccgcacggacatctgccagggggcgctgggggattgctggctcctggccgcc
atcgcctccctgaccctcaacgacactctcctgcaccgggtggtcccgcatggccagagt
ttccaggatggctatgctggaatcttccacttccagctgtggcagttcggggagtgggtg
gacgtggtggtggatgacctgctgcccaccaaggacgggaagctcgtgttcgtgcactcg
gcgcagggcaacgagttctggagcgccctgctggagaaggcctacgccaaagtgaatggc
agctacgaggccctgtcggggggcagcacctcggagggcttcgaggactttaccggcggc
gtgaccgagtggtatgagctgcgcaaggcgcccagcgacctctaccagatcatcctcaag
gccctggagagaggctccctgctgggctgctccatcgacatctccagcgtcctggacatg
gaggccatcaccttcaagaagctggtgaaaggccatgcctactcagtgactggggccaag
caggtgaactaccagggccagatggtgaacctgatccggatgcggaacccctggggagag
gtggagtggaccggagcctggagtgatggttccatggagtggaacaacgtggacccttat
gagcgggagcagctccggatcaagatggaagatggggagttctggatgtccttccgggac
ttcatgcgggagttcacgcgcctggaaatctgcaacctgacccccgacgcactcaagagt
cgcagcatccgcaagtggaacacgaccctgtacgagggcacgtggcgccggggcagcacg
gccggtggctgccgcaactacccagccaccttctgggtgaaccctcagtttaagatccgg
ctggaggaggtggatgaccccgacgatgactgcggggggcgcgaggacggctgcagcttc
gtcctggctctcatgcagaagcacaaacggcgtgagcgccgctacggccgcgacatggag
accatcggctttgccgtctatgaggtccctccggagctggtgggccggcctgtgcacttg
aagcgcgatttcttcctggccaactcgtcccgggcgcgctcggagcagttcatcaacctg
cgggaggtgagcacgcgcttccgcctcccgcccggcgagtacgtggtggtgccgtccacc
ttcgagcccaacaaggagggcgacttcgtgctccgcttcttctcggagaagagcgccggc
acccaggagctggacgaccagatccaggccaatctccccgatgagcgtgtcctctcggaa
gaggagatcgacgacaacttcaagaccctcttccgacagctggctggggaggacctggag
atcagcgtgaaggagcttcggaccatcctcaacaggatcatcagcaaacacaaagatctg
cgcaccaagggcttcagtctggagtcctgccgcagcatggtgaacctcatggaccgtgat
ggcaacgggaagctgggcctggtggagttcaacatcctgtggaaccgcatccggaattac
ctggccatcttccggcagtttgacctggacaagtcgggcagcatgagcgcctacgagatg
cgcatggccatcgaggctgcaggcttcaagctcaacaagaagctgtacgagctcatcatc
acccgctactcggagcctgacctggccgtggacttcgacaactttgtgtgctgcttggtg
cggctggagaccatgttccgcttcttcaaagctctggacacagatctggacggcgtggtg
accttcgacctgtttaagtggttacagctgacgatgtttgcctga

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