Sorex fumeus (smoky shrew): 130039883
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Entry
130039883 CDS
T10594
Symbol
NRXN2
Name
(RefSeq) LOW QUALITY PROTEIN: neurexin-2-beta
KO
K07377
neurexin
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130039883 (NRXN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfum04131
]
130039883 (NRXN2)
Membrane trafficking [BR:
sfum04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
130039883 (NRXN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
130039883
NCBI-ProteinID:
XP_055987807
LinkDB
All DBs
Position
Unknown
AA seq
1704 aa
AA seq
DB search
MTPGSRWRPPPLLLLLLGLLALAARAGGLEFGGGPGQWARYARWAGAASSGELSFSLRTN
ATRALLLYLDDGGDCDFLELLLVDGRLRLRFTLSCAEPATLQLDTPVADDRWHMVLLTRD
ARRTALAVDGEARAAEVRSKRREMQVASDLFVGGIPPDVRLSALTLSTVKYEPPFRGLLA
NLKLGERPPALLGSQGLRGAAADPLCAPARNPCANGGLCTVLAPGEVGCDCSHTGFGGKF
CSEEEHPMEGPAHLTLNSEVGSLLFSEGGAGRGGAGDVHQPTKGKEEFVATFKGSEFFCY
DLSHNPIQSSTDEITLAFRTLQRNGLMLHTGKSADYVNLSLKSGAVWLVINLGSGAFEAL
VEPVNGKFNDNNWHEVRVTRNLRQHAGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFF
YIGGSPNTADLPGSPVSNNFMGCLKDVVYKNNDFKLELSRLAKEGDPKMKLQGDLSFRCE
DVAALDPVTFESPEAFVALPRWSAKRTGSISLDFRTTEPNGLLLFSQGRRAXGVGSASAA
QRADYFAMELLDGYLYLLLDMGSGGIKLRASSRKVNDGEWCHVDFQRDGRKGSISVNSRS
TPFLATGESEVLDLESELYLGGLPEGGRADLPLPPEVWTAALRAGYVGCVRDLFIDGRSR
DLRGLAEAQGAAGIAPFCSRETLKQCASAPCRNGGLCREGWNRFVCDCVGTGFLGRVCER
EATVLSYDGSMYMKIMLPHAMHTEAEDVSLRFMSQRAYGLMMATTSRESADTLRLELDGG
QMKLTVNLDCLRVGCAPSKGPETLFAGHKLNDNEWHTVRVLRRGKSLQLSVDNVTVEGQM
AGAHTRLEFHNIETGIMTERRFISVVPSNFIGHLSGLVFNGQPYMDQCKDGDITYCELNA
RFGLRAIVADPVTFKSRSSYLALATLQAYASMHLFFQFKTTAPDGLLLFNSGNGNDFIVI
ELVKGYIHYVFDLGNGPSLMKGNSDKPVNDNQWHNVVVSRDPGNVHTLKIDSRTVTQHSN
GARNLDLKGELYIGGLSRNMFGSLPKLVASRDGFQGCLASVDLNGRLPDLIADALHRIGQ
VERGCDGPSTTCTEESCANQGVCLQQWDGFTCDCTMTSYGGPVCNDPGTTYIFGKGGALI
TYTWPPNDRPSTRMDRLAVGFSTHQRSAVLVRVDSASGLGDYLQLHIDQGTVGVIFNVGT
DDITIDEPNAIVSDGKYHVVRFTRSGGNATLQVDSWPVNERYPAGNFDNERLAIARQRIP
YRLGRVVDEWLLDKGRQLTIFNSQAAIKIGGRDQGRPFQGQVSGLYYNGLKVLALAAESD
PNVRTEGHLRLVGEGPSVLLSAETTATTLLADMATTIMETTTTMATTTTRRGRSPTLRDS
TTQNTDDLLVASAECPSDDEDLEECEPSTGGELILPIITEDSLDPPPVATRSPFVPPPPT
FYPFLTGVGATQDTLPPPAARRPPAGGPCQAEQDDSDCEEPMEASGFASGEVFDSSLPPT
DDEDFYTTFPLVTDRTTLLSPRKPAPRPNLRTDGATGAPGVLLAPSAPAPNLPAGKMNHR
DPLQPLLENPPLGPGAPTSFEPRRPPPLRPGVTAAPGFPRLPTANPTGPGERGPPGAVEV
IRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYQVDQSRNYISNSAQSNGAVV
KEKAPAAPKTPSKAKKNKDKEYYV
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atgacgcctgggagccggtggcggccgccgccgctgctgctgctgctgctcgggctgctg
gcgctggcggcgcgcgcggggggcctggagttcggcggcggccccgggcagtgggcgcgc
tacgcgcgctgggcgggcgcggcgagcagcggcgagctcagcttcagcctgcgcaccaac
gccacgcgcgcgctgctgctctacctggacgacggcggcgactgcgacttcctggagctg
ctgctggtggacgggcgcctgcgcctgcgcttcacgctctcttgcgccgagcccgccacg
ctgcagctggacacgccggtggccgacgaccgctggcacatggtgctgctgacccgcgac
gcgcgccgcacggcgctggcggtggacggcgaggcccgcgccgccgaggtgcggtccaag
cggcgcgagatgcaggtggccagcgacctgttcgtgggaggcatcccgcccgacgtgcgc
ctctcggcgctcacgctcagcaccgtcaagtacgagccgcccttccgcggcctcctggct
aacctgaagctcggcgagcggccccccgcgctgctgggcagccagggcctgcgcggcgcc
gccgccgaccccctgtgcgcgcccgcgcgcaacccctgcgccaacggcggcctctgcacg
gtgctggcccccggcgaggtgggctgcgactgcagccacacgggcttcggcggcaagttc
tgcagcgaagaggagcaccccatggaaggtccggctcacctgacgttaaacagcgaagta
gggtccttactgttctccgaggggggggccgggagaggaggagccggcgatgtgcaccag
ccaacgaaaggcaaggaggagttcgtggccacgttcaagggcagcgagttcttctgctac
gacctgtcgcacaacccgatccagagcagcaccgacgagatcacgctggccttccgcacg
ctgcagcgcaacgggctcatgctgcacacgggcaagtcggccgactatgtcaacctctcc
ctcaagtccggtgccgtctggctcgtcatcaacctgggttcgggcgccttcgaggccctc
gtggagcccgtcaacggcaagttcaacgacaacaactggcacgaggtccgggtcacccga
aacctgcgccagcacgcagggattggacacgctatggtgaccatctcggtggacggcatc
ctgaccaccacgggctacacgcaggaggattacaccatgctgggctccgatgacttcttc
tacatcggcggcagccccaacacggccgacctgcccggctcgcccgtcagcaacaacttt
atgggctgcctcaaggatgtggtctataagaacaatgacttcaagctggagctctcccgc
ctggccaaggaaggggaccccaagatgaagctgcaaggggacctgtccttccgctgcgag
gacgtggccgccctggaccccgtgaccttcgagagccccgaggcctttgtggctctgccc
cgctggagcgccaagcgcacgggctccatctccctggacttccgcaccaccgagcccaac
gggctgctgctcttcagccagggccggcgggcgnngggggtgggcagcgccagtgccgcg
cagcgcgcagactacttcgccatggagctgctggatggttacctctacctgctgctcgac
atggggtccgggggcatcaagctgcgggcgtccagccgcaaggtcaacgacggcgagtgg
tgccatgtggacttccagcgggacgggcgcaaaggctccatctcagtgaacagccgcagc
accccgttcctggccaccggggagagcgaggtcctggacctggagagtgagctgtacctg
ggcggcctgcctgaggggggccgagcagacctgcccctgccccccgaggtgtggacagcg
gcgctgcgggcgggctacgtgggctgcgtgcgggacctcttcatcgacgggcgcagccga
gacctccggggcctggcagaagcgcagggggccgcgggcatcgcccccttctgctcccgg
gagaccctgaagcagtgcgcctcggccccctgccgcaacggcggcctctgccgcgagggc
tggaaccgctttgtctgcgactgcgttgggaccggcttcctggggcgggtctgcgagaga
gaggccacggtcctgagctatgacggctccatgtacatgaagatcatgctgccacatgcc
atgcacacggaagctgaggacgtgtccctgcgcttcatgtcccagcgggcctatgggctc
atgatggccaccacctccagggagtccgccgacacgctgcgccttgagctggatgggggc
cagatgaagctcacagtcaacctggactgcctgcgtgtcggctgtgcacccagtaaaggc
cccgagaccctctttgcggggcacaagctgaatgacaacgagtggcacacggtgagggtg
ctgcggcggggcaagagcctgcagctgtccgtggacaacgtgaccgtggaggggcagatg
gcgggggcacacacacgcctggagttccacaacatcgagacgggcatcatgacggagcgg
cgcttcatctccgtggtgccctccaacttcatcgggcacctcagcgggctagtgttcaac
gggcagccctacatggaccagtgcaaggacggcgacatcacctactgcgagctcaatgcg
cgattcggcctgcgtgccatcgtggccgaccccgtcaccttcaagagccgcagcagctac
ctggcgctggccacgctgcaggcctacgcgtccatgcacctcttcttccagttcaagacc
actgctcctgatgggctgctcctcttcaactcgggcaacggcaacgacttcatcgtcatt
gagctggtcaaggggtacatccactacgtgttcgacctggggaacggcccgtccttgatg
aaggggaactcagacaagccggtcaacgacaaccagtggcacaacgtggtggtgtcccgt
gacccgggcaacgtgcacacgctcaagatcgactcccgcaccgtcacccagcactccaac
ggcgcccgcaacctcgacctcaaaggggagctgtacatcggcggcctgagcaggaacatg
ttcgggagcctgcccaagctggtggcctcgcgggacggcttccagggctgcctggcctct
gtggacctcaacgggcgcctcccagacctcatcgctgacgccctgcaccgcatcgggcag
gtggagaggggctgtgatggcccaagtaccacctgcaccgaggagtcctgtgccaaccag
ggcgtctgcctgcagcagtgggacggcttcacctgtgactgcaccatgacgtcgtacgga
ggccccgtgtgcaacgaccccgggaccacgtacatcttcgggaaggggggagcactcatc
acctacacgtggccccccaatgaccggcccagcacgaggatggaccgcctggccgtgggc
ttcagcacgcaccagcggagcgccgtgctggtgcgcgtggacagcgcgtcgggcctgggg
gactatctgcagctgcacatcgatcagggcaccgtaggggtgatctttaacgtgggcacg
gacgacattaccatcgacgagcccaacgccatcgtgagcgacggcaaataccacgtggtg
cgcttcacaagaagcggtggcaacgccaccctgcaggtggacagctggccggtcaacgag
cggtacccggcaggaaactttgataacgagcgcctggcgattgctagacagagaatcccc
taccggcttggtcgagtagtagatgagtggctgctcgacaaaggccgccagctgaccatc
ttcaacagccaggccgccatcaagatcgggggccgggaccagggccgccccttccagggc
caggtgtccggcctctactacaacggactcaaggtgctggcgctggccgccgagagcgac
cccaatgtgcggaccgagggccacctgcgcctggtgggggaggggccgtccgtgctgctg
agcgcggagaccacagccaccaccctgctggccgacatggccaccaccatcatggagacc
accaccaccatggccactaccaccacccgccggggccgctcgcccacgctgagggacagc
accacgcagaacacagatgacctcctggtggcttcggccgagtgtccgagcgacgacgag
gacctggaggagtgtgagcccagtactggaggagagttaatattgcccataatcacggag
gactccctagacccccctcccgtggccacccggtcccccttcgtgccccctccccccacc
ttctaccccttcctcacgggcgtgggcgccacccaagacaccctgcccccgcccgccgcc
cgccgcccgcccgccgggggcccgtgccaggcggagcaggacgacagcgactgcgaggag
cccatggaggcctcgggcttcgcctccggggaggtgtttgactccagcctcccccccacg
gacgacgaggacttttacaccaccttccccctggtcacggaccgcaccaccctcctgtca
ccccgcaaacccgccccccggcccaacctcaggacagatggggccacgggcgcccccggg
gtgctgctggcgccctccgccccggcccccaacctgcccgcgggcaaaatgaaccaccga
gacccgctgcagcccctgctggagaaccctccgctggggcccggggcccccacgtccttc
gagccgcggaggcccccgcccctgcgccccggcgtgacggccgcccccggcttcccccgt
ctgcccacagccaaccccacggggcccggggagcggggcccgccgggcgccgtggaggtg
atccgggagtcgagcagcaccacgggcatggtggtgggcatcgtggcggcggcggcgctg
tgcatcctcatcctgctctacgccatgtacaagtaccgcaaccgcgacgagggctcctac
caggtggaccagagccggaattacatcagcaactcggcgcagagcaacggcgcggtggtg
aaggagaaggcgcccgccgcgcccaagacgcccagcaaggccaagaagaacaaagacaag
gagtattacgtctga
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integrated database retrieval system
