Sorex fumeus (smoky shrew): 130039963
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Entry
130039963 CDS
T10594
Symbol
SART1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130039963 (SART1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfum03041
]
130039963 (SART1)
04121 Ubiquitin system [BR:
sfum04121
]
130039963 (SART1)
Spliceosome [BR:
sfum03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
130039963 (SART1)
Ubiquitin system [BR:
sfum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130039963 (SART1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SART-1
HIND
Motif
Other DBs
NCBI-GeneID:
130039963
NCBI-ProteinID:
XP_055987941
LinkDB
All DBs
Position
Unknown
AA seq
810 aa
AA seq
DB search
MGSSKKHRGEKEATGTTAAASTGGAPEPPPRHREHKKHKHRSGGGGGSSSGGGGERRKRS
RERGAERGGGGSGGRRGADVDSRGGAHGRERGQPEPSERRVKREKRDDGYEAAASSKTSS
GDASSLSIEETNKLRAKLGLKPLEVNAVKKEAGTKDEPVAAELINPMALRQREELREKLA
AAKEKRLLNQKLGKIKTLGEDDPWLDDTAAWIERSRQLQKEKDLAEKRAKLLEEMDQEFG
VSTLVEEEFEQRRQDLYSARDLQGLTVEHAIDSFREGETLILTLKDKGVLQEEEDVLVNV
NLVDKERAEKNVELRKKKPDYLPYAEDESVDDLAQQKPRSILAKYDEELEGERPRSFRLE
QGGLADGLRERELEEIRAKLRLQAQSLCTVGPRIASEYLTPEEMVTFKKTKRRVKKIRKK
EKEVIMRADDLLPLGDQSQDGDFGSRARGRGRRRVPEAGEDLPEEEEKEPTVQLPQSDDT
RVENMDISDEEDAGAPAPASPEPLEEDEAELELQKQLEKGRRLRQLQQLRDSGEKVVEIV
RQLEARQRWEDEADPERKGSIVFNATSEFCRTLGEIPTYGLAGNREEQEELMDFERDEER
SANAGSESDGEENLGWSTVNLDEEKQQQDFSASSTTILDEEPIVNRGLAAALLLCQNKGL
LETTVQKVARVKAPNKSLPSAVYCIEDKMAIDDKYSRREEYRGFTQDFKEKDGYKPDVKI
EYVDETGRKLTPKEAFRQLSHRFHGKGSGKMKTERRMKKLDEEALLKKMSSSDTPLGTVA
LLQEKQKAQKTPYIVLSGSGKSMNANTITK
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgtccaagaagcaccgcggggagaaagaggccaccgggacgacggcggcggcc
agcaccgggggcgcccccgagccgccgccgcggcaccgggagcacaaaaagcacaagcac
cggagcggcggcggcggcggcagcagcagcggcggcggcggcgagcggcggaagcgcagt
cgggagcgcggggccgagcgcggcggcggcggcagcggcgggcggcgcggggccgacgtg
gacagccgcggcggcgcgcacggccgggagcgcggccagcccgagccctcggagcgccgc
gtgaagcgggagaagcgcgatgacggctacgaggcggctgccagctccaagaccagctcc
ggggatgcctcgtcccttagcatcgaggagaccaataaactccgggccaagctggggctg
aaacccttggaggtcaatgccgtgaagaaggaggcgggcaccaaggatgagcccgtggcg
gccgagctcatcaaccccatggccctgcggcagcgcgaggagctgcgggagaagctggcg
gcggccaaggagaagcgcctgctgaaccagaagctggggaagataaagactctgggcgag
gacgacccctggctggacgacacggccgcctggatcgagcggagccggcagctgcagaag
gagaaggacttggccgagaagcgggccaagctgctggaggagatggaccaagagttcggc
gtcagcaccctggtggaggaggagttcgagcagcggcggcaggacctgtacagcgcccgg
gacctgcagggcctcacggtggagcacgccatcgactccttccgcgaaggggagacgctt
atcctcacgctcaaggacaaaggcgtgctgcaggaggaggaggacgtgctggtgaacgtg
aacctggtggacaaggagcgcgccgagaagaacgtggagctgcggaagaagaagcccgac
tacctgccctacgccgaggacgagagcgtggacgacctggcgcagcagaagccgcgctcc
atcctggccaagtacgacgaggagctggagggcgagcggccgcgctccttccggctggag
cagggcggcctggccgacgggcttcgggagcgggagctggaggagatccgggccaagctg
cggctgcaggcccagtccctgtgcaccgtggggccgcggattgcctccgagtacctcacg
cccgaggagatggtgaccttcaaaaagaccaagcggagggtgaagaagatccgtaagaag
gagaaggaggtgattatgcgcgccgacgacttgctgcctctcggggaccagtcgcaggac
ggggacttcggttccagggcgcggggccggggccggcgccgagtgcccgaggcgggcgag
gacctcccggaggaggaggagaaggagcccaccgtgcagctgccgcagtctgacgacacc
cgggtggagaacatggacatcagcgacgaggaggacgcgggcgcgccggcccccgcgtcc
cccgagcccctggaggaggacgaggcagagctggagctgcagaagcagctggagaagggg
cggcggctgcggcagctgcagcagctgcgggacagcggggagaaggtggtggagattgtg
aggcagctggaggcccggcagcgctgggaggacgaggccgaccccgagcgcaagggcagc
atcgtgttcaacgccacgtccgagttctgccgcacgctgggcgagatccccacctacggg
ctggccggcaaccgcgaggagcaggaggagctcatggacttcgagcgggatgaggaacgc
tcggccaacgcgggctctgagtcggacggggaggagaacctgggctggagcaccgtgaac
ctggacgaggagaagcagcagcaggacttctccgcctcctccaccaccatcctggacgag
gagcccatcgtgaaccgcgggctggcggccgccctgctcctgtgtcagaacaaagggctg
ctggagacgacggtgcagaaggtggcccgggtgaaggcccccaacaagtccctgccgtcc
gccgtgtactgcatcgaggacaagatggccatcgacgacaagtacagccggcgggaggag
taccgtggcttcacgcaggacttcaaggagaaggacggctacaagcccgacgtgaagatc
gagtacgtggacgagacgggccggaagctcacccccaaggaggcgttccggcagctgtca
caccgcttccacgggaagggctcgggcaagatgaagacggagcgacgcatgaagaagctg
gacgaggaggcgctcctgaagaagatgagctccagcgacacgcccctgggcaccgtggcc
ctgctgcaggagaagcagaaggcccagaagacgccctacatcgtgctcagcggcagcggc
aagagcatgaacgcgaacaccatcaccaagtga
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