Sorex fumeus (smoky shrew): 130040028
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Entry
130040028 CDS
T10594
Symbol
CPSF7
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 7 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03015
mRNA surveillance pathway
sfum03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130040028 (CPSF7)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
130040028 (CPSF7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfum03019
]
130040028 (CPSF7)
Messenger RNA biogenesis [BR:
sfum03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
130040028 (CPSF7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Motif
Other DBs
NCBI-GeneID:
130040028
NCBI-ProteinID:
XP_055988036
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MSEGVDLIDIYADEEFNQDPEFNNTDQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQEPS
PKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAENRA
NGQSKGYAEVVVASENSVHRLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKRECVRV
PRGGIPPRAHSRDSSDSADGRATPSENLVPSSARVDKPPSVLPYFSRPPSALPLMGLPPP
PIPPPPPLSSSFGVPPPPPGIHYQHLMPPPPRLPPHLAVPPPGAIPPALHLNPAFFPPPN
ATVGPPPDTYMKASTPYNHHGSRDSGPPPSTVSEAEFEEIMKRNRAISSSAISKAVSGAS
AGDYSDAIETLLTAIAVIKQSRVANDERCRVLISSLKDCLHGIEAKSYSVGASGSSSRKR
HRSRERSPSRSRESSRRHRDLLHNEDRHDEYFQERNREHERHRDRERDRHH
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaggagtggacttgatcgacatctacgcggacgaggagttcaaccaggaccca
gagttcaacaatacagatcagattgacctgtatgatgacgtattgacagccacctcccag
ccatcagatgacagaagcagcagcactgagccaccacctcctgtgcgccaggaaccgtct
cccaagcccaataacaagacccccgcaattctgtacacctacagtggcctgcgcaatagg
cgagccgctgtctacgtgggcagcttctcctggtggaccacagaccagcagctgatccaa
gttattcgctctataggagtctatgatgtggtggagttgaaatttgccgagaaccgagca
aatggccagtccaaagggtatgctgaggtggtggttgcctcagaaaactctgttcacaga
ttgttggaactcctgccgggaaaagttcttaatggagaaaaagtggatgtgaggccggcc
acccggcaaaacctgtcacagtttgaggcacaggctcggaaacgtgagtgcgtccgagtc
ccaagagggggaatacctccaagggcccactcccgagattctagcgattctgctgatgga
cgggccacgccctcagagaaccttgttccctcatctgcccgtgtggataagccccccagt
gtgctgccctacttcagccgccccccttcagccctccccctcatgggcctgcccccgccc
cccatcccacccccaccgcctctctcctcgagcttcggggtccctcctcctcctcctggc
atccactaccagcatctcatgccccctcctccccgattacctcctcatctggctgtacct
ccccccggggccatcccacctgcccttcacctcaaccccgccttcttccccccgccaaat
gccacagtggggcctccaccagacacttacatgaaggcctcgacaccctataaccaccat
ggcagccgggattcgggccctccgccctctacagtgagcgaagctgagtttgaagagatc
atgaagcgaaacagggcgatttccagcagtgccatctccaaagcagtatctggagccagt
gcaggggattatagtgacgccatcgagacgctgctcacagcgatcgccgttatcaaacag
tcccgggttgccaatgacgagcgctgtcgagtcctcatctcctctcttaaggactgtctt
cacggcattgaagctaagtcctacagcgtgggtgctagcgggagctcgtccaggaaaaga
catcggtcccgagagaggtcgcccagccggtcccgagagagcagcaggaggcaccgcgac
ctgctccacaacgaagatcggcacgacgagtatttccaggagcggaaccgggagcacgag
agacaccgggatagagagcgggaccggcaccactga
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