Sorex fumeus (smoky shrew): 130040097
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Entry
130040097 CDS
T10594
Name
(RefSeq) 26S proteasome regulatory subunit 10B-like
KO
K03064
26S proteasome regulatory subunit T4
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03050
Proteasome
sfum05010
Alzheimer disease
sfum05012
Parkinson disease
sfum05014
Amyotrophic lateral sclerosis
sfum05016
Huntington disease
sfum05017
Spinocerebellar ataxia
sfum05020
Prion disease
sfum05022
Pathways of neurodegeneration - multiple diseases
sfum05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
130040097
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
130040097
09164 Neurodegenerative disease
05010 Alzheimer disease
130040097
05012 Parkinson disease
130040097
05014 Amyotrophic lateral sclerosis
130040097
05016 Huntington disease
130040097
05017 Spinocerebellar ataxia
130040097
05020 Prion disease
130040097
05022 Pathways of neurodegeneration - multiple diseases
130040097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sfum03051
]
130040097
Proteasome [BR:
sfum03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
130040097
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_22
AAA_2
RuvB_N
PRS7_OB
AAA_5
nSTAND3
Prot_ATP_ID_OB_N
AAA_14
AAA_7
AAA_11
RNA_helicase
DUF815
NPHP3_N
AAA_33
Csa3_N
Mg_chelatase
DUF3829_2nd
TIP49
AAA_24
bpMoxR
AAA_18
AAA_3
TPR_MLP1_2
AAA_28
NACHT
TsaE
ATPase
Med4
Occludin_ELL
AAA_25
AAA_17
Parvo_NS1
DUF4140
Motif
Other DBs
NCBI-GeneID:
130040097
NCBI-ProteinID:
XP_055988094
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
MDECSVAENRSPDQTLPRMDKSPGERRRNRVWAPVREKVNLEIPSIPSEPRLLIIADPRD
KALQDYRKKLLEHKEIDGRLKELREQLKELTKQYENSENDLKALQSVGQIVGEVLKQLTE
EKFIVKATNGPRYVVGCHGQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHED
PGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARA
VASQLDCNFLKAVSSSIVDKYIGESARLIREMFKYARDHQPCIIFMDEIDAIGGRRFSEG
TSADREIQRTLMELLNQMDGFDTLHRVKMIMATKRPDTLDPALLRPGRLDRKIHIDLPNE
QARLDKLKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFADNDFVVQEDFMK
AVRKVADSKKLESKLDYKPV
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtgttcagtggccgagaaccgttcccctgaccagaccttgccacggatggac
aaaagtccgggcgaacggagaagaaacagggtctgggccccagtacgagagaaagtaaac
ctagagattcccagcatcccctctgagccacggcttctcatcatcgcagaccctagagat
aaggctctccaggactaccgcaagaaactgctggagcacaaggagatcgacggccgtctc
aaggagctcagagaacaattaaaagaacttaccaaacaatatgaaaactctgaaaatgac
ctgaaggccctacaaagtgttggacagattgttggtgaagtactcaagcagttaactgaa
gaaaaattcattgttaaagctacaaatggaccaagatatgttgtgggttgtcatggacag
cttgacaaaagtaagctgaagcctggaacaagagttgctttggatatgactactttaact
ataatgagatatttgccaagagaagtggatccactggtttataatatgtctcacgaagat
cctggaaatgtttcttattctgagattggagggctctctgaacagattcgggaattaaga
gaggtgatagagttacctcttacaaacccagaattattccagcgtgtaggaataattcct
ccaaaaggctgtttgttatatgggccaccaggtacaggaaaaacactcttggcgcgagct
gttgctagccagctggattgcaatttcttaaaggctgtatctagttctattgtagacaag
tatattggtgaaagtgctcgtttgatcagagaaatgtttaagtatgccagagatcatcag
ccatgcatcatttttatggatgaaatagatgctattggtggacgtcggttttctgagggt
acttcagctgatagagagattcaaagaactttgatggagttactaaatcaaatggatgga
tttgacactctgcatagagttaaaatgatcatggctacaaagagaccagatacattggat
cctgctttgcttcgtccaggaagattagatagaaaaatacatattgatttaccaaatgaa
caagcaagattagataaattgaaaatccatgcaggtcccattacaaagcatggtgaaata
gattatgaggcaatcgtgaaactttctgatggctttaatggagcagacctgagaaatgtt
tgtactgaagcaggtatgtttgctgataatgattttgtagtgcaggaagacttcatgaaa
gcagtcagaaaagtggctgattctaagaaactagagtctaaattggactacaaacctgtg
taa
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